Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_E09_e357_09.seq
(1421 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protei... 48 2e-07
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 48 2e-07
AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein pr... 45 1e-06
AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein pr... 45 1e-06
L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protei... 42 1e-05
AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like prote... 41 2e-05
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 37 4e-04
X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein. 36 7e-04
L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protei... 36 7e-04
DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped prot... 35 0.002
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 23 5.5
>L01616-1|AAA30096.1| 74|Tribolium castaneum zinc finger protein
protein.
Length = 74
Score = 47.6 bits (108), Expect = 2e-07
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 73 HEXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNH 195
H+ FT L +H+R HTGERP+RC HC F + L H
Sbjct: 16 HKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRH 56
Score = 37.9 bits (84), Expect = 2e-04
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +1
Query: 82 FTTQAILNSHIRTHTGERPHRCTHCA 159
F A L H+R HTGERP+ C HC+
Sbjct: 47 FVQVANLRRHLRVHTGERPYGCEHCS 72
Score = 33.1 bits (72), Expect = 0.005
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +1
Query: 115 RTHTGERPHRCTHCAATFAHSSALYNHNKL 204
RTHTGE+P C C F L H +L
Sbjct: 2 RTHTGEKPFECQECHKRFTRDHHLKTHMRL 31
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 47.6 bits (108), Expect = 2e-07
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 73 HEXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNH 195
H+ FT L +H+R HTGERP+RC HC F + L H
Sbjct: 169 HKRFTRDHHLKTHMRLHTGERPYRCEHCDRQFVQVANLRRH 209
Score = 44.8 bits (101), Expect = 2e-06
Identities = 20/43 (46%), Positives = 26/43 (60%)
Frame = +1
Query: 82 FTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKLLH 210
F A L H+R HTGERP+ C HC+ F+ S+ L H L+H
Sbjct: 200 FVQVANLRRHLRVHTGERPYGCEHCSMKFSDSNQLKAH-VLIH 241
Score = 39.1 bits (87), Expect = 8e-05
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +1
Query: 73 HEXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKL 204
+ F + +L +H RTHTGE+P C C F L H +L
Sbjct: 141 NRSFGYKHVLQNHERTHTGEKPFECQECHKRFTRDHHLKTHMRL 184
Score = 31.1 bits (67), Expect = 0.021
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +1
Query: 82 FTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNH 195
F+ L +H+ HT E+P C C F L +H
Sbjct: 228 FSDSNQLKAHVLIHTNEKPFECDKCRGRFRRRHHLVHH 265
Score = 25.4 bits (53), Expect = 1.0
Identities = 8/34 (23%), Positives = 17/34 (50%)
Frame = +1
Query: 100 LNSHIRTHTGERPHRCTHCAATFAHSSALYNHNK 201
++ ++ + +RP C C +F + L NH +
Sbjct: 122 VSPEVKDSSRDRPFTCEVCNRSFGYKHVLQNHER 155
>AY490815-1|AAR82970.1| 136|Tribolium castaneum glass protein
protein.
Length = 136
Score = 45.2 bits (102), Expect = 1e-06
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +1
Query: 73 HEXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKLLHNPHRIK*IQTTSKQ 252
++ F+ A L +H+RTH+GE+P RC C F+ SS++ H + H+ R + K
Sbjct: 28 NKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMR-THSGERPYRCRLCKKA 86
Query: 253 LSWLQCWTDHI 285
S T H+
Sbjct: 87 FSDSSTLTKHL 97
Score = 45.2 bits (102), Expect = 1e-06
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 82 FTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKL 204
F+ + + +H+RTH+GERP+RC C F+ SS L H ++
Sbjct: 59 FSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRI 99
Score = 41.1 bits (92), Expect = 2e-05
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 76 EXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNH 195
+ + + L +H+RTH+GE+P+RC C +F+ ++ L H
Sbjct: 1 KSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAH 40
Score = 39.1 bits (87), Expect = 8e-05
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 76 EXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKL 204
+ F+ + L H+R H+GE+P+ C C F+ S L H ++
Sbjct: 85 KAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRHMRV 127
>AY293621-1|AAP46162.1| 392|Tribolium castaneum glass protein
protein.
Length = 392
Score = 45.2 bits (102), Expect = 1e-06
Identities = 23/71 (32%), Positives = 37/71 (52%)
Frame = +1
Query: 73 HEXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKLLHNPHRIK*IQTTSKQ 252
++ F+ A L +H+RTH+GE+P RC C F+ SS++ H + H+ R + K
Sbjct: 284 NKSFSQAANLTAHVRTHSGEKPFRCPVCDRRFSQSSSVTTHMR-THSGERPYRCRLCKKA 342
Query: 253 LSWLQCWTDHI 285
S T H+
Sbjct: 343 FSDSSTLTKHL 353
Score = 45.2 bits (102), Expect = 1e-06
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 82 FTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKL 204
F+ + + +H+RTH+GERP+RC C F+ SS L H ++
Sbjct: 315 FSQSSSVTTHMRTHSGERPYRCRLCKKAFSDSSTLTKHLRI 355
Score = 42.3 bits (95), Expect = 8e-06
Identities = 16/48 (33%), Positives = 29/48 (60%)
Frame = +1
Query: 52 PGLQXIRHEXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNH 195
P + I + + + L +H+RTH+GE+P+RC C +F+ ++ L H
Sbjct: 249 PNVCRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNKSFSQAANLTAH 296
Score = 39.1 bits (87), Expect = 8e-05
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = +1
Query: 76 EXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKL 204
+ F+ + L H+R H+GE+P+ C C F+ S L H ++
Sbjct: 341 KAFSDSSTLTKHLRIHSGEKPYECKLCLLRFSQSGNLNRHMRV 383
>L01617-1|AAA30097.1| 46|Tribolium castaneum zinc finger protein
protein.
Length = 46
Score = 41.9 bits (94), Expect = 1e-05
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +1
Query: 76 EXFTTQAILNSHIRTHTGERPHRCTHCAATFA 171
+ F+ +L HIRTHTGE+P CT+C FA
Sbjct: 15 KAFSRPWLLQGHIRTHTGEKPFSCTYCNRAFA 46
>AY600513-1|AAT11861.1| 314|Tribolium castaneum spalt-like protein
protein.
Length = 314
Score = 41.1 bits (92), Expect = 2e-05
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +1
Query: 52 PGLQXIRHEXFTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNH 195
P I H + ++ L H RTHTGERP +C C F L H
Sbjct: 134 PNQCVICHRVLSCKSALQMHYRTHTGERPFKCKICGRAFTTKGNLKTH 181
Score = 29.9 bits (64), Expect = 0.048
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = +1
Query: 73 HEXFTTQAILNSHIRTHTGE 132
H+ FT +L HIR HTGE
Sbjct: 201 HKKFTNALVLQQHIRLHTGE 220
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 36.7 bits (81), Expect = 4e-04
Identities = 19/44 (43%), Positives = 21/44 (47%)
Frame = +1
Query: 82 FTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKLLHN 213
FT L H+RTHTGE+ C C F S L H K HN
Sbjct: 356 FTRSDELQRHLRTHTGEKRFACPICNKRFMRSDHLAKHVK-THN 398
Score = 33.1 bits (72), Expect = 0.005
Identities = 15/34 (44%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Frame = +1
Query: 100 LNSHIRTHTGERPHRCT--HCAATFAHSSALYNH 195
L +H+R HTGERP C C F S L H
Sbjct: 332 LKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRH 365
>X91618-1|CAA62821.1| 524|Tribolium castaneum hunchback protein.
Length = 524
Score = 35.9 bits (79), Expect = 7e-04
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 100 LNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKLLHNPHR 222
L H+R H G +P +C C T + S L +H K N +R
Sbjct: 246 LEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYR 286
>L01615-1|AAA30095.1| 69|Tribolium castaneum zinc finger protein
protein.
Length = 69
Score = 35.9 bits (79), Expect = 7e-04
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 100 LNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKLLHNPHR 222
L H+R H G +P +C C T + S L +H K N +R
Sbjct: 4 LEYHLRNHAGSKPFQCNKCDYTCVNKSMLNSHMKSHSNVYR 44
>DQ414246-1|ABD63008.1| 126|Tribolium castaneum odd-skipped
protein.
Length = 126
Score = 34.7 bits (76), Expect = 0.002
Identities = 16/38 (42%), Positives = 18/38 (47%)
Frame = +1
Query: 82 FTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNH 195
FT L H RTHT ERP+ C C F L +H
Sbjct: 89 FTKSYNLLIHERTHTDERPYSCDICGKAFRRQDHLRDH 126
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 23.0 bits (47), Expect = 5.5
Identities = 8/12 (66%), Positives = 10/12 (83%)
Frame = -2
Query: 220 YEDCVVVCCGCR 185
Y++ VVV CGCR
Sbjct: 361 YKEMVVVGCGCR 372
Score = 22.2 bits (45), Expect = 9.6
Identities = 7/18 (38%), Positives = 11/18 (61%)
Frame = -1
Query: 401 LGWKSWDIACGGFLSYDC 348
+GW W +A G+ +Y C
Sbjct: 283 VGWNDWIVAPLGYDAYYC 300
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,660
Number of Sequences: 336
Number of extensions: 4033
Number of successful extensions: 29
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 42301525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -