Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_E09_e357_09.seq
         (1421 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0360 + 2815067-2816033,2816120-2816198,2816275-2816342,281...    36   0.078
01_06_1729 + 39486553-39487413,39487953-39488020,39489574-394901...    32   0.96 
12_01_1024 - 10467644-10469274,10469424-10469482,10469820-104703...    30   3.9  
03_01_0372 + 2895807-2895883,2896557-2896647,2896741-2896839,289...    30   5.1  
02_04_0316 - 21978330-21979397                                         30   5.1  
02_04_0194 + 20820985-20821027,20822168-20822367,20822477-208225...    29   6.7  
03_04_0188 - 18241815-18242477                                         29   8.9  

>03_01_0360 +
           2815067-2816033,2816120-2816198,2816275-2816342,
           2817382-2817464,2821566-2823083
          Length = 904

 Score = 35.9 bits (79), Expect = 0.078
 Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = +1

Query: 109 HIRTHTGERPHRCT--HCAATFAHSSALYNHNK 201
           HIR HTGERP++C+   C  +F + S    H K
Sbjct: 867 HIRVHTGERPYKCSAPDCGQSFRYVSDYSRHRK 899


>01_06_1729 + 39486553-39487413,39487953-39488020,39489574-39490154,
            39490623-39491432,39491738-39493035
          Length = 1205

 Score = 32.3 bits (70), Expect = 0.96
 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
 Frame = +1

Query: 109  HIRTHTGERPHRCTH--CAATFAHSSALYNHNK 201
            H+R HTG+RP+ C    CA TF   S    H +
Sbjct: 1159 HLRVHTGDRPYVCHEPGCAQTFRFVSDFSRHKR 1191


>12_01_1024 - 10467644-10469274,10469424-10469482,10469820-10470357,
            10470975-10471666,10471912-10472062,10473797-10473864,
            10473964-10474042,10474763-10474765,10476427-10477255
          Length = 1349

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
 Frame = +1

Query: 109  HIRTHTGERPHRCTH--CAATFAHSSALYNHNK 201
            H+R HTG RP+ C    C  TF   S    H +
Sbjct: 1303 HMRVHTGVRPYECQEPGCGQTFRFVSDFSRHKR 1335


>03_01_0372 +
           2895807-2895883,2896557-2896647,2896741-2896839,
           2897220-2897268,2897269-2897405,2898027-2898248,
           2898335-2898488,2898574-2898723,2898890-2898978,
           2899632-2899844,2900180-2900314,2900461-2900640,
           2901004-2901111,2901215-2901340,2901421-2901550,
           2901637-2901729,2902067-2902192,2902294-2902304
          Length = 729

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = -1

Query: 521 SEKNSKLVSEGDLLRFNHFSNLAISFLCSCMNELSDQVLHL 399
           SE+  K  SEG ++    F NL+++ L  C+N L++   H+
Sbjct: 270 SERIDKSGSEGHMIEEAKFINLSLTSLGKCINALAENSPHI 310


>02_04_0316 - 21978330-21979397
          Length = 355

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = +1

Query: 82  FTTQAILNSHIRTHTGERPH-RCTHCAATFAHSSALYNHNKLL--HNP 216
           F   A L SH+R H GE    RC+ C  TF+    L+ H  L   H P
Sbjct: 241 FAVLADLRSHLR-HCGEEAQWRCS-CGTTFSRKDKLFGHLALFEGHTP 286


>02_04_0194 +
           20820985-20821027,20822168-20822367,20822477-20822566,
           20822820-20822825,20822866-20823009,20823089-20823580
          Length = 324

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = +1

Query: 82  FTTQAILNSHIRTHTGERPHRCTH--CAATFAHSSALYNHNKLLH 210
           F+    L +H++TH+ +  H C +  CA  F   S L  H K  H
Sbjct: 115 FSLDFNLKAHMKTHSVDNYHVCKYPECARRFTQESKLRAHIKQQH 159


>03_04_0188 - 18241815-18242477
          Length = 220

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 11/22 (50%), Positives = 13/22 (59%)
 Frame = +1

Query: 136 PHRCTHCAATFAHSSALYNHNK 201
           PHRCT C  +FA   AL  H +
Sbjct: 134 PHRCTICRRSFATGQALGGHKR 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,166,981
Number of Sequences: 37544
Number of extensions: 526359
Number of successful extensions: 1244
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1102
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1191
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4501617904
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)