Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_E09_e357_09.seq
         (1421 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    52   3e-08
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    25   7.0  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 52.4 bits (120), Expect = 3e-08
 Identities = 26/65 (40%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
 Frame = +1

Query: 82  FTTQAILNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKLLH---NPHRIK*IQTTSKQ 252
           F T A L +H+ THTG +PHRC HC   F  S  L  H +  H    PH+       S +
Sbjct: 164 FKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPHKCTECDYASVE 223

Query: 253 LSWLQ 267
           LS L+
Sbjct: 224 LSKLK 228



 Score = 43.6 bits (98), Expect = 1e-05
 Identities = 16/39 (41%), Positives = 21/39 (53%)
 Frame = +1

Query: 100 LNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKLLHNP 216
           L SH+  HT ++P++C  CA TF     L  H    HNP
Sbjct: 370 LESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNP 408



 Score = 40.7 bits (91), Expect = 1e-04
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +1

Query: 100 LNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKLLH 210
           L  H+R HTGE+P+ C  C A F  S++L  H K++H
Sbjct: 255 LTRHMRIHTGEKPYSCDVCFARFTQSNSLKAH-KMIH 290



 Score = 39.5 bits (88), Expect = 2e-04
 Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
 Frame = +1

Query: 97  ILNSHIRTHTGERPHRCTHCAATFAHSSALYNH--NKLLHNPHRIK 228
           +L+ H++TH+ +RPH+C  C   F   ++L NH        PHR K
Sbjct: 141 LLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCK 186



 Score = 38.7 bits (86), Expect = 4e-04
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 100 LNSHIRTHTGERPHRCTHCAATFAHSSALYNHNKL 204
           L  HIRTHTGE+P +C HC         L  H ++
Sbjct: 227 LKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRI 261



 Score = 37.9 bits (84), Expect = 7e-04
 Identities = 19/39 (48%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = +1

Query: 82  FTTQAILNSHIR-THTGERPHRCTHCAATFAHSSALYNH 195
           FTT   L  HIR  HT ERPH+CT C       S L  H
Sbjct: 192 FTTSGELIRHIRYRHTHERPHKCTECDYASVELSKLKRH 230



 Score = 28.7 bits (61), Expect = 0.43
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +1

Query: 109 HIRTHTGERPHRCTHCAATFAHSSALYNHNKLLHNPHR 222
           H +TH GE+ +RC +C         L +H  LLH   +
Sbjct: 345 HAKTHEGEKCYRCEYCPYASISMRHLESH-LLLHTDQK 381



 Score = 26.2 bits (55), Expect = 2.3
 Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = +1

Query: 100 LNSHIRT-HTGERPHRCTHCAATFAHSSALYNHNK 201
           L  H++  HT ++P +C  C +TF    +   H K
Sbjct: 313 LRIHVQNLHTADKPIKCKRCDSTFPDRYSYKMHAK 347


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 24.6 bits (51), Expect = 7.0
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -3

Query: 750 YGXTIGKXLRSPKRDNQNIKFNYQRFNKLLGTDISTSEYLK 628
           Y   I    R P+ D +N +  Y   +  +  DIS +EYL+
Sbjct: 720 YAYPIPHTTRPPRPDEENGRSYYFISHDEMMADISANEYLE 760


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,004,763
Number of Sequences: 2352
Number of extensions: 17369
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 164996370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)