Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_E07_e341_09.seq
         (1517 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   3.3  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            26   3.3  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   7.6  
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    25   7.6  
AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic acetylch...    25   7.6  

>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 120  IYGYNKYKFIYKSAKNINCEREYI 191
            + GY  YK++Y SA  ++ ++ YI
Sbjct: 2510 VRGYRLYKYVYDSAGRLSRKKYYI 2533


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 25.8 bits (54), Expect = 3.3
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = +3

Query: 120  IYGYNKYKFIYKSAKNINCEREYI 191
            + GY  YK++Y SA  ++ ++ YI
Sbjct: 2511 VRGYRLYKYVYDSAGRLSRKKYYI 2534


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -3

Query: 357 TNSLKASNSVQSYTRGTPIRSD 292
           TN+++AS+S   YT  T + SD
Sbjct: 202 TNTVEASDSCNHYTHRTKVTSD 223


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 349 PKGLEFCTIVYTWDTNT*RCFYLIYEVN*LL*LTVASLRI 230
           PKG++     +TW +      Y IY    ++ L VA  RI
Sbjct: 92  PKGVDMPRTTFTWCSKAFLWAYFIYACETVIVLVVARERI 131


>AY705398-1|AAU12507.1|  555|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 4 protein.
          Length = 555

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
 Frame = -1

Query: 380 VERLVRPSQIA*RPRI-LYNRIHVGHQYVAMLLPNLRSKLTFIANSSIASHPPGGTLNNA 204
           V+ L  PS    RP I LYN    GH  V ++     +K T   N  +   PP    ++ 
Sbjct: 99  VQMLHVPSDHIWRPDIVLYNNAD-GHYEVTLM-----TKATVYNNGMVIWQPPAVYKSSC 152

Query: 203 GTDNNVFPFTI 171
             D   FP+ +
Sbjct: 153 SIDVEYFPYDV 163


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,230,022
Number of Sequences: 2352
Number of extensions: 22642
Number of successful extensions: 21
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 178001010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)