Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_E06_e333_10.seq
         (1524 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    25   1.5  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    25   2.0  
AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    23   6.0  

>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 710 LGRLEKFIFTEWRFHNPHTIQLAKELNKTDSEL 808
           L RLEK  F E     P   +LA +LN  +S +
Sbjct: 83  LARLEKEFFKENYVSRPRRCELAAQLNLPESTI 115


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 547 RSLVPAFKIRTVAMAFQIIGHIYTFHTSYII 639
           R L+P  K++T+ + F I+       + YII
Sbjct: 239 RGLIPRAKVKTIKITFVIVSVFILCWSPYII 269


>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
            candidate 54 protein.
          Length = 311

 Score = 23.0 bits (47), Expect = 6.0
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
 Frame = +1

Query: 907  APQNKT-LXFLAXHHMAVANYRTILDFRPGFRLTFYXXLGXASLYF 1041
            APQ K  L F +    +VA + T  DF    R TF+  L   + YF
Sbjct: 257  APQRKELLRFASESRGSVAKF-TAADFFEIDRGTFFGILSTTTSYF 301


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,792
Number of Sequences: 336
Number of extensions: 6412
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45783975
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)