Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_E06_e333_10.seq
(1524 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g22420.1 68418.m02615 acyl CoA reductase, putative similar to... 92 8e-19
At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to... 86 5e-17
At3g56700.1 68416.m06307 male sterility protein, putative simila... 83 4e-16
At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to... 79 1e-14
At3g44540.1 68416.m04787 acyl CoA reductase, putative similar to... 77 4e-14
At5g22500.1 68418.m02626 acyl CoA reductase, putative / male-ste... 72 9e-13
At3g11980.1 68416.m01482 male sterility protein 2 (MS2) identica... 64 2e-10
At3g44560.1 68416.m04789 acyl CoA reductase, putative similar to... 63 5e-10
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 31 2.0
At5g28510.1 68418.m03470 glycosyl hydrolase family 1 protein con... 31 2.6
At3g44200.1 68416.m04739 protein kinase family protein contains ... 31 2.6
At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identi... 31 2.6
At1g66280.1 68414.m07527 glycosyl hydrolase family 1 protein con... 30 3.5
At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identi... 30 3.5
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 30 3.5
At3g21370.1 68416.m02698 glycosyl hydrolase family 1 protein con... 30 4.6
At3g09260.1 68416.m01100 glycosyl hydrolase family 1 protein con... 30 4.6
At2g41950.1 68415.m05190 expressed protein 29 6.1
At1g06470.2 68414.m00686 phosphate translocator-related low simi... 29 6.1
At1g06470.1 68414.m00685 phosphate translocator-related low simi... 29 6.1
At5g07180.1 68418.m00818 leucine-rich repeat family protein / pr... 29 8.1
At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family... 29 8.1
At1g61550.1 68414.m06934 S-locus protein kinase, putative simila... 29 8.1
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 29 8.1
At1g19750.1 68414.m02469 transducin family protein / WD-40 repea... 29 8.1
>At5g22420.1 68418.m02615 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 409
Score = 92.3 bits (219), Expect = 8e-19
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 9/242 (3%)
Frame = +2
Query: 152 PNTYTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPGWTCSKVGPQGFMMGAAKG 331
PNTY FTK + E + + P I+RPT+I +++ +P PGW ++ KG
Sbjct: 161 PNTYVFTKAMGEMLLGHYRETMPIVIIRPTIITSTFSDPFPGWIEGLKTVDSVIIFYGKG 220
Query: 332 VVRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVYHCSSSTQKPFCWSMLENS 511
+++ + + + D IPVD+VVN ++ TVYH SS Q P + +
Sbjct: 221 ILKCFLVDQKTVCDIIPVDMVVNAMIAIAADHCHDSGSHTVYHVGSSNQNPVIYKQIYEM 280
Query: 512 VNGNLHKYPL---KSAVWYPHLKFVPSLWLFRLSAIFIHFIPAILLDMVLRVTGGRPILF 682
++ K PL + P + + +L FR+ + +P +L ++ ++ + F
Sbjct: 281 MSRYFMKSPLVGRNGMLIVPKVTRISTLARFRVYTNLRYKLPIQILGLLSVISLSQRDKF 340
Query: 683 RLHKNVWNSLGRLEK----FIFTEWRF--HNPHTIQLAKELNKTDSELFYIDITTIYWED 844
LH + RL K ++ + F N T+++ E K +LF + I WED
Sbjct: 341 ALHNRKFKMAMRLVKLYKPYVLFKGIFDDKNMETLRIKNEA-KDMEKLFGTNPKCIDWED 399
Query: 845 YF 850
YF
Sbjct: 400 YF 401
>At3g44550.1 68416.m04788 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 402
Score = 86.2 bits (204), Expect = 5e-17
Identities = 57/185 (30%), Positives = 88/185 (47%), Gaps = 4/185 (2%)
Frame = +2
Query: 98 TLSDEALDEIEPKLLKDHPNTYTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPG 277
TLS + L +E L PNTY FTK + E + K + P I+RPTMI ++ EP PG
Sbjct: 218 TLSMKELG-MERAKLHGWPNTYVFTKSMGEMLLGKHKENLPLVIIRPTMITSTLSEPFPG 276
Query: 278 WTCSKVGPQGFMMGAAKGVVRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVY 457
W ++ KGV++ + +++ D IPVD+V N ++ A A VY
Sbjct: 277 WIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPVDMVANAMITAAAKHAGGSGVHMVY 336
Query: 458 HCSSSTQKPFCWSMLENSVNGNLHKYPLK----SAVWYPHLKFVPSLWLFRLSAIFIHFI 625
H SS Q P + + K PL+ S + ++F+P++ LF L + +
Sbjct: 337 HVGSSHQNPVTFGEIHEIAVRYFTKNPLRSRNGSLITVSKVRFIPTMALFSLYMTLRYKL 396
Query: 626 PAILL 640
P +L
Sbjct: 397 PLQVL 401
>At3g56700.1 68416.m06307 male sterility protein, putative similar
to SP|Q08891 Male sterility protein 2 {Arabidopsis
thaliana}; contains Pfam profile PF03015: Male sterility
protein
Length = 527
Score = 83.4 bits (197), Expect = 4e-16
Identities = 69/240 (28%), Positives = 108/240 (45%), Gaps = 3/240 (1%)
Frame = +2
Query: 155 NTYTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPGWTCSKVGPQGFMMGAAKGV 334
N+YTFTK + E + P I+RP++I +S+ EP PGW ++ AKG
Sbjct: 277 NSYTFTKAIGEAVIHSKRGNLPVVIIRPSIIESSYNEPFPGWIQGTRMADPIILAYAKGQ 336
Query: 335 VRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVYHCSSSTQ-KPFCWSMLENS 511
+ ++ D IPVD+V N + A VY+ +SS+ P L +
Sbjct: 337 ISDFWADPQSLMDIIPVDMVANAAIAAMAKHGCGVPEFKVYNLTSSSHVNPMRAGKLIDL 396
Query: 512 VNGNLHKYPLKSAVW-YPHLKFVPSLWLFRLSAIFIHFIPAILLDMVLRVTGGRPILFRL 688
+ +L +PL+ V H+K SL F SA+ I ++ GG +
Sbjct: 397 SHQHLCDFPLEETVIDLEHMKIHSSLEGF-TSALSNTIIKQ--ERVIDNEGGGLSTKGKR 453
Query: 689 HKNVWNSLGR-LEKFIFTEWRFHNPHTIQLAKELNKTDSELFYIDITTIYWEDYFKNLLL 865
N + SL + E + F + RF N +T L +E++ + + F DI I WE Y N+ L
Sbjct: 454 KLNYFVSLAKTYEPYTFFQARFDNTNTTSLIQEMSMEEKKTFGFDIKGIDWEHYIVNVHL 513
>At4g33790.1 68417.m04796 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein;
No start codon identified, may contain anomalous
splicing at 5' end.
Length = 380
Score = 78.6 bits (185), Expect = 1e-14
Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 12/256 (4%)
Frame = +2
Query: 152 PNTYTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPGWTCSKVGPQGFMMGAAKG 331
PNTY FTK + E V + ++RP++I +++KEP PGWT +G KG
Sbjct: 125 PNTYVFTKAMGEMMVGTKRENLSLVLLRPSIITSTFKEPFPGWTEGIRTIDSLAVGYGKG 184
Query: 332 VVRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVYHCSSSTQKPFCWSMLENS 511
+ D ++D +P D+VVN ILV+ K +YH SS + P S
Sbjct: 185 KLTCFLCDLDAVSDVMPADMVVNSILVS-MAAQAGKQEEIIYHVGSSLRNPMKNSKFPEL 243
Query: 512 VNGNLHKYPLKS----AVWYPHLKFVPSLWLFRLSAIFIHFIPAILLDMV-LRVTGGRPI 676
P + V ++ + S+ F + I L++V + +
Sbjct: 244 AYRYFSIKPWTNKEGKVVKVGAIEILSSMRSFHRYMTIRYLIALKGLELVNIILCKLFEK 303
Query: 677 LFRLHKNVWNSLGRL----EKFIFTEWRFHNPHTIQLAKELNKT--DSELFYIDITTIYW 838
F+ N + RL + ++F F + +T +L K ++KT ++E+FY D + W
Sbjct: 304 EFQYFNKKINFIFRLVDLYQPYLFFYGIFDDSNTEKLRKMVSKTGVENEMFYFDPKVLDW 363
Query: 839 EDYFKNL-LLGVRRYL 883
+DYF N ++G+ +Y+
Sbjct: 364 DDYFLNTHVIGLLKYV 379
>At3g44540.1 68416.m04787 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 433
Score = 76.6 bits (180), Expect = 4e-14
Identities = 41/130 (31%), Positives = 62/130 (47%)
Frame = +2
Query: 152 PNTYTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPGWTCSKVGPQGFMMGAAKG 331
PNTY FTK + E + + P I+RPTMI +++ EP PGW ++ KG
Sbjct: 234 PNTYVFTKSMGEMLLGNYRENLPIVIIRPTMITSTFSEPFPGWIEGLRTIDSVIVAYGKG 293
Query: 332 VVRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVYHCSSSTQKPFCWSMLENS 511
++ +++ D IPVD+V N ++ A A TVYH SS + P + + +
Sbjct: 294 RLKCFLADPNSVLDLIPVDMVANAMVTAAAIHAGKLGSQTVYHVGSSCKNPITFEQIHDL 353
Query: 512 VNGNLHKYPL 541
K PL
Sbjct: 354 AASYFTKNPL 363
>At5g22500.1 68418.m02626 acyl CoA reductase, putative /
male-sterility protein, putative similar to acyl CoA
reductase [Simmondsia chinensis] GI:5020215; contains
Pfam profile PF03015: Male sterility protein; identical
to cDNA male sterility 2-like protein GI:1491614
Length = 491
Score = 72.1 bits (169), Expect = 9e-13
Identities = 40/130 (30%), Positives = 61/130 (46%)
Frame = +2
Query: 152 PNTYTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPGWTCSKVGPQGFMMGAAKG 331
PNTY FTK + E + K + P I+RPTMI ++ EP PGW ++ KG
Sbjct: 232 PNTYVFTKAMGEMLMGKYRENLPLVIIRPTMITSTIAEPFPGWIEGLKTLDSVIVAYGKG 291
Query: 332 VVRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVYHCSSSTQKPFCWSMLENS 511
++ +++ D IP D+VVN ++ A + +YH SS + P + L +
Sbjct: 292 RLKCFLADSNSVFDLIPADMVVNAMVAAATAHSGDTGIQAIYHVGSSCKNPVTFGQLHDF 351
Query: 512 VNGNLHKYPL 541
K PL
Sbjct: 352 TARYFAKRPL 361
>At3g11980.1 68416.m01482 male sterility protein 2 (MS2) identical to
male sterility protein 2 (MS2) SP:Q08891 (Arabidopsis
thaliana)
Length = 616
Score = 64.5 bits (150), Expect = 2e-10
Identities = 62/259 (23%), Positives = 113/259 (43%), Gaps = 16/259 (6%)
Frame = +2
Query: 155 NTYTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPGWTCSKVGPQGFMMGAAKGV 334
+TY FTK + E + P I+RP++I +++K+P PGW ++ KG
Sbjct: 355 DTYVFTKAMGEMMINSTRGDVPVVIIRPSVIESTYKDPFPGWMEGNRMMDPIVLCYGKGQ 414
Query: 335 VRRLPLAKDNIADYIPVDVVVNEILVA----GWHTATTKSGLTVYHCSSSTQKPFCWSML 502
+ + + D +P D+VVN L A G + + + VY +SS P + L
Sbjct: 415 LTGFLVDPKGVLDVVPADMVVNATLAAIAKHGMAMSDPEPEINVYQIASSAINPLVFEDL 474
Query: 503 ENSVNGNLHKYPLKSAVWYPHLKFVPSLWLFRLSAIFIHFI------PAILLDMVLRVTG 664
+ + P + P + V + LF F + + L+ + V
Sbjct: 475 AELLYNHYKTSPCMDSKGDPIM--VRLMKLFNSVDDFSDHLWRDAQERSGLMSGMSSVDS 532
Query: 665 G--RPILFRLHKNVWNS--LGRL-EKFIFTEWRFHNPHTIQLAKELNKTDSELFYIDITT 829
+ + F K+V + L + E + F RF N +T +L + +++ + F D+ +
Sbjct: 533 KMMQKLKFICKKSVEQAKHLATIYEPYTFYGGRFDNSNTQRLMENMSEDEKREFGFDVGS 592
Query: 830 IYWEDYFKNL-LLGVRRYL 883
I W DY N+ + G+RR++
Sbjct: 593 INWTDYITNVHIPGLRRHV 611
>At3g44560.1 68416.m04789 acyl CoA reductase, putative similar to
acyl CoA reductase [Simmondsia chinensis] GI:5020215;
contains Pfam profile PF03015: Male sterility protein
Length = 449
Score = 62.9 bits (146), Expect = 5e-10
Identities = 37/118 (31%), Positives = 58/118 (49%)
Frame = +2
Query: 125 IEPKLLKDHPNTYTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPGWTCSKVGPQ 304
+E L PNTY FTK + E + + P I+RPTMI ++ EP PGW
Sbjct: 226 MERAKLHGWPNTYVFTKSMGEMLLGNHKENLPLVIIRPTMITSTLFEPFPGWIEGLRTVD 285
Query: 305 GFMMGAAKGVVRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVYHCSSSTQ 478
++ KGV++ + +++ D IP D+V N ++ A A T +G + H +Q
Sbjct: 286 SVIIAYGKGVLKCFLVDVNSVCDMIPADMVANAMIAA----AATHAGGSKVHMVYQSQ 339
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 31.1 bits (67), Expect = 2.0
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Frame = +2
Query: 161 YTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPGWTCSKVGPQGFMMGAAKGVVR 340
YT ++ E V C P T+V PT++ ASW + V W + ++G + G +
Sbjct: 140 YTISEGDGHKEWVSCVRFSPNTLV-PTIVSASWDKTVKVWNLQNCKLRNSLVGHS-GYLN 197
Query: 341 RLPLAKDN--IADYIPVDVVVNEILVAGWHTATTKSGLTVYHCSSSTQKPFCWSMLENSV 514
+ ++ D A V++ L G + ++G ++ S + + + ENS+
Sbjct: 198 TVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHSLCFSPNRYWLCAATENSI 257
>At5g28510.1 68418.m03470 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis
thaliana]
Length = 533
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = -3
Query: 310 ETLRTD-FRASPTWDRLFP*CYNHGRPNDGAREQISTFHHLMLGQV 176
+ L TD FR S +W R+FP HGR +G + F+H ++ ++
Sbjct: 107 KNLNTDSFRLSISWTRIFP----HGREENGVSKSGVQFYHDLIDEL 148
>At3g44200.1 68416.m04739 protein kinase family protein contains
protein kinase domain, Pfam:PF00069; contains
serine/threonine protein kinase domain,
INTERPRO:IPR002290
Length = 941
Score = 30.7 bits (66), Expect = 2.6
Identities = 17/32 (53%), Positives = 20/32 (62%)
Frame = +3
Query: 405 SLLLDGIPQQLSQV*QSTIAHHQPRSRSAGRC 500
S+ L IP +S V Q+TIAHHQP R G C
Sbjct: 631 SMRLTEIPDSVSGV-QNTIAHHQP-EREQGSC 660
>At1g66270.1 68414.m07523 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 524
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 310 ETLRTD-FRASPTWDRLFP*CYNHGRPNDGAREQISTFHHLMLGQVFGESV 161
+ L TD FR S W R+FP HGR G + F+H ++ ++ +
Sbjct: 104 KNLNTDAFRLSIAWSRIFP----HGRKEKGVSQAGVQFYHELIDELLKNGI 150
>At1g66280.1 68414.m07527 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase 1 (GI:12043529) [Arabidopsis
thaliana]
Length = 524
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 310 ETLRTD-FRASPTWDRLFP*CYNHGRPNDGAREQISTFHHLMLGQVFGESV 161
+ L TD FR S W R+FP HGR G + F+H ++ ++ +
Sbjct: 104 KNLNTDAFRLSIAWSRIFP----HGRKEKGVSQAGVKFYHDLIDELLKNGI 150
>At1g66270.2 68414.m07524 beta-glucosidase (PSR3.2) nearly identical
to GI:2286069 from (Arabidopsis thaliana) (Plant Mol.
Biol. 34 (1), 57-68 (1997)); similar to thioglucoside
glucohydrolase (GI:984052) [Arabidopsis thaliana]
Length = 522
Score = 30.3 bits (65), Expect = 3.5
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 310 ETLRTD-FRASPTWDRLFP*CYNHGRPNDGAREQISTFHHLMLGQV 176
+ L TD FR S W R+FP HGR G + F+H ++ ++
Sbjct: 104 KNLNTDAFRLSIAWSRIFP----HGRKEKGVSQAGVQFYHELIDEL 145
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 161 YTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVPGW 280
YT ++ E V C P T+V PT++ ASW + V W
Sbjct: 140 YTISEADGHKEWVSCVRFSPNTLV-PTIVSASWDKTVKVW 178
>At3g21370.1 68416.m02698 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
similar to beta-glucosidase (GI:757740) [Brassica
napus]; similar to beta-glucosidase GB:AAB64244 from
[Arabidopsis thaliana], (Plant Mol. Biol. 34 (1), 57-68
(1997))
Length = 527
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = -3
Query: 304 LRTD-FRASPTWDRLFP*CYNHGRPNDGAREQISTFHHLMLGQVFGESV 161
L TD FR S +W R+FP HGR G ++ F+H ++ ++ +
Sbjct: 103 LNTDGFRLSISWPRIFP----HGRMEKGISKEGVQFYHDLIDELLKNDI 147
>At3g09260.1 68416.m01100 glycosyl hydrolase family 1 protein
contains Pfam PF00232 : Glycosyl hydrolase family 1
domain; TIGRFAM TIGR01233: 6-phospho-beta-galactosidase;
almost identical to beta-glucosidase GI:1732570 from
[Arabidopsis thaliana]; similar to beta-glucosidase 1
(GI:12043529) [Arabidopsis thaliana]
Length = 524
Score = 29.9 bits (64), Expect = 4.6
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = -3
Query: 310 ETLRTD-FRASPTWDRLFP*CYNHGRPNDGAREQISTFHHLMLGQVFGESV 161
+ L TD FR S W R+FP HGR G + F+H ++ ++ +
Sbjct: 103 KNLNTDAFRMSIAWPRIFP----HGRKEKGVSQAGVQFYHDLIDELIKNGI 149
>At2g41950.1 68415.m05190 expressed protein
Length = 266
Score = 29.5 bits (63), Expect = 6.1
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 542 KSAVWYPHLKFVPSLWLFRLSAIFIHFIPAILLDM 646
K W + +VP W L A+F++F+PA+ D+
Sbjct: 154 KVKCWQGEMIYVPEKWS-PLDAVFLYFLPALPFDL 187
>At1g06470.2 68414.m00686 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 29.5 bits (63), Expect = 6.1
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Frame = +2
Query: 296 GPQGFMMGAAKG-VVRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVYHCS-- 466
G + F +G + G + LP A D P DV+ + W+T +T LT+Y+ +
Sbjct: 42 GSRSFDVGYSSGDTLETLPKASK--VDISPADVLKTLFFILVWYTFST--FLTLYNKTLL 97
Query: 467 SSTQKPFCWSMLENSVNGNLHKYPLKSAVWYPHLKFVPSLWLFRLSAIFIHFIPAIL 637
F +L N+++ ++ K WY +F P + + F+ +P L
Sbjct: 98 GDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSGRFQPDVTI-SWRDYFVRVVPTAL 153
>At1g06470.1 68414.m00685 phosphate translocator-related low
similarity to SP|P52178 Triose phosphate/phosphate
translocator, non-green plastid, chloroplast precursor
(CTPT) {Brassica oleracea},
phosphoenolpyruvate/phosphate translocator precursor
[Mesembryanthemum crystallinum] GI:9295275
Length = 414
Score = 29.5 bits (63), Expect = 6.1
Identities = 28/117 (23%), Positives = 50/117 (42%), Gaps = 3/117 (2%)
Frame = +2
Query: 296 GPQGFMMGAAKG-VVRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVYHCS-- 466
G + F +G + G + LP A D P DV+ + W+T +T LT+Y+ +
Sbjct: 42 GSRSFDVGYSSGDTLETLPKASK--VDISPADVLKTLFFILVWYTFST--FLTLYNKTLL 97
Query: 467 SSTQKPFCWSMLENSVNGNLHKYPLKSAVWYPHLKFVPSLWLFRLSAIFIHFIPAIL 637
F +L N+++ ++ K WY +F P + + F+ +P L
Sbjct: 98 GDDLGKFPAPLLMNTIHFSIQAVLSKMITWYWSGRFQPDVTI-SWRDYFVRVVPTAL 153
>At5g07180.1 68418.m00818 leucine-rich repeat family protein /
protein kinase family protein contains Pfam domains
PF00560: Leucine Rich Repeat and PF00069: Protein kinase
domain
Length = 932
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/73 (23%), Positives = 33/73 (45%)
Frame = +2
Query: 317 GAAKGVVRRLPLAKDNIADYIPVDVVVNEILVAGWHTATTKSGLTVYHCSSSTQKPFCWS 496
G+ K V+ + +A D + V ++E + G+ ++T VY C+S T +P
Sbjct: 590 GSTKLVILHMDMAIHTFDDIMRVTENLDEKYIIGYGASST-----VYKCTSKTSRPIAIK 644
Query: 497 MLENSVNGNLHKY 535
+ N N ++
Sbjct: 645 RIYNQYPSNFREF 657
>At3g22440.1 68416.m02836 hydroxyproline-rich glycoprotein family
protein identical to hydroxyproline-rich glycoprotein
[Arabidopsis thaliana] gi|9293881|dbj|BAB01784
Length = 532
Score = 29.1 bits (62), Expect = 8.1
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 152 PNTYTFTKHLAEHEVVKCADLFPCTIVRPTMIVASWKEPVP 274
P+ +TF +HL +VK DL + R ++ ++W++ +P
Sbjct: 254 PDVHTFLQHLVTFGIVKSEDL---ALYRKLVVGSAWRKQMP 291
>At1g61550.1 68414.m06934 S-locus protein kinase, putative similar
to receptor protein kinase [Ipomoea trifida]
gi|836954|gb|AAC23542; contains S-locus glycoprotein
family domain, Pfam:PF00954
Length = 802
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 7/45 (15%)
Frame = +2
Query: 245 IVASWK---EPVPG----WTCSKVGPQGFMMGAAKGVVRRLPLAK 358
+++SWK +P+PG + ++V PQGF+M +K R P AK
Sbjct: 163 VLSSWKSYTDPLPGEFVGYITTQVPPQGFIMRGSKPYWRSGPWAK 207
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +2
Query: 449 TVYHCSSSTQKPFCWSMLENSVNGNLHKYPLKSAVWYP 562
T Y S K C ++ + N HKY + SA+WYP
Sbjct: 77 TDYEASGLIAKHKCIFTVDKQ-HENGHKYAISSAIWYP 113
>At1g19750.1 68414.m02469 transducin family protein / WD-40 repeat
family protein similar to Cockayne syndrome
complementaion group A proteins (GI:18077663)[Mus
musculus] and (SP:Q13216)[Homo sapiens]; confirmed by
full-length cDNA GI:15982896
Length = 450
Score = 29.1 bits (62), Expect = 8.1
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 449 TVYHCSSSTQKPFC-WSMLENSVNGNLHKYPLKSAVWYP 562
T Y S K C +++ + NG HKY + SA+WYP
Sbjct: 77 TDYEASGLIAKHKCIFTVRKQHENG--HKYAISSAIWYP 113
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,895,060
Number of Sequences: 28952
Number of extensions: 539271
Number of successful extensions: 1270
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1266
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4077124416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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