Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_E04_e317_10.seq
         (1610 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   9.8  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      23   9.8  
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    23   9.8  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 511 YLFF*RCNVLIS**YFVVDFEGFMY 437
           Y +F +C+ LI+    V +F+G MY
Sbjct: 462 YTYFDKCDTLINNAVAVENFKGGMY 486


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -2

Query: 511 YLFF*RCNVLIS**YFVVDFEGFMY 437
           Y +F +C+ LI+    V +F+G MY
Sbjct: 462 YTYFDKCDTLINNAVAVENFKGGMY 486


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 669 EIHSYYTMV*NNVFLYLKISNLDGTN 746
           E+HS+ T++  +  L  K S+ DG N
Sbjct: 90  ELHSWMTLMWTDSHLSWKPSDFDGIN 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,040
Number of Sequences: 438
Number of extensions: 5966
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 56821875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)