Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_E02_e301_10.seq
(1558 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 41 0.003
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 40 0.007
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 39 0.012
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 38 0.016
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 38 0.021
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 35 0.15
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 34 0.26
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 34 0.26
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 31 1.9
02_02_0359 - 9390175-9390416,9390924-9391044,9391069-9391410,939... 31 3.3
09_06_0310 - 22212348-22212695,22213561-22213766,22213796-222139... 30 4.3
03_05_0468 - 24630701-24631399 30 5.7
11_04_0255 - 15422536-15422640,15422734-15422790,15422917-154230... 29 7.5
01_06_0246 + 27845898-27846001,27846235-27846237,27846472-278467... 29 7.5
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 29 9.9
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 40.7 bits (91), Expect = 0.003
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +2
Query: 236 DKRISMDQWPEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYGLAGADL 391
D R + + P PFGQ+P+L+ + +S AI+RY+ KY GADL
Sbjct: 39 DLRTAAHKQPHFLALNPFGQIPVLQDGDEVLYESRAINRYIATKYKAEGADL 90
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 39.5 bits (88), Expect = 0.007
Identities = 46/185 (24%), Positives = 74/185 (40%), Gaps = 12/185 (6%)
Frame = +2
Query: 221 GQEFEDKRISMDQWPEIKP----KTPFGQMPLLEIDGKQYAQSIAISRYLGRKYG---LA 379
G E+E + M +P + PFGQ+P E +S AIS+Y+ RK+G L
Sbjct: 26 GAEYEVVPVDMSTGEHKRPPHISRNPFGQVPAFEDGDLTLFESRAISKYILRKHGSDLLR 85
Query: 380 GADLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEFRETKYQFLIEKLNEILQ 559
++L E +D +E + A + + V +EKL + L+
Sbjct: 86 ESNLSESAMVDVWLEVESSHFDGAMSPIIFQCFIVPMFMGGATDIGVVNESLEKLKKALE 145
Query: 560 KNGGHIALGKLTWGDFIFAGMFDYLKSML-----QEPTLEEKYPIFKKTIDTVLSLPKVK 724
++ K GDFI + ++ ++ E YP K ID V+ P VK
Sbjct: 146 VYEAQLSKSKYLAGDFISLADISHFPTVYYLLASAHASVLEAYPRVKAWIDDVMQRPSVK 205
Query: 725 GYVDA 739
+A
Sbjct: 206 KVTEA 210
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 38.7 bits (86), Expect = 0.012
Identities = 44/166 (26%), Positives = 74/166 (44%), Gaps = 12/166 (7%)
Frame = +2
Query: 263 PEIKPKTPFGQMPLLEIDGKQYA-QSIAISRYLGRKYGLAGADL--EEDFEIDQNVEFLN 433
PE + PFGQ+P + DG Y +S AI +Y+ RKY ADL E + V+
Sbjct: 44 PEHLKRNPFGQIPAFQ-DGDLYLFESRAIGKYILRKYKTREADLLREGNLREAAMVDVWT 102
Query: 434 DIRANA--AAVHYEKDEAV--KAKKLAEFRETKYQFLIEKLNEILQKNGGHIALGKLTWG 601
++ + +A+ E + A + + EKL ++L+ ++ G
Sbjct: 103 EVETHQYNSAISPIVYECIINPAMRGIPTNQKVVDESAEKLKKVLEVYEARLSQSTYLAG 162
Query: 602 DFI-FAGM--FDYLKSMLQEP--TLEEKYPIFKKTIDTVLSLPKVK 724
DF+ FA + F Y + P +L + YP K + +++ P VK
Sbjct: 163 DFVSFADLNHFPYTFYFMGTPYASLFDSYPHVKAWWERLMARPSVK 208
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 38.3 bits (85), Expect = 0.016
Identities = 40/166 (24%), Positives = 78/166 (46%), Gaps = 12/166 (7%)
Frame = +2
Query: 263 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYGLAGADL--EEDFEIDQNVEFLND 436
PE + PFG++P L+ +S AI++Y+ RKY + DL E D V+ +
Sbjct: 44 PEHVERNPFGKIPALQDGDLVLFESRAIAKYILRKYKSSKVDLLRESDIREAALVDVWTE 103
Query: 437 IRAN-----AAAVHYEKDEAVKAKKLAEFRETKYQFLIEKLNEILQKNGGHIALGKLTWG 601
+ A+ + + +E + + ++ ++ L EKL ++L+ ++ + G
Sbjct: 104 VEAHQYYPALSPIVFECIIFPIMRGVPTNQQVVHESL-EKLKKVLETYEARLSGSRYLAG 162
Query: 602 DFI-FAGM--FDYLKSMLQEP--TLEEKYPIFKKTIDTVLSLPKVK 724
DF+ FA + F + + P +L + YP K + ++S P +K
Sbjct: 163 DFLSFADLNHFPFTFYFMATPCASLFDAYPHVKAWWEGLMSRPSIK 208
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 37.9 bits (84), Expect = 0.021
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 6/56 (10%)
Frame = +2
Query: 263 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKY-----GLA-GADLEEDFEID 412
PE + PFG++P+LE QS AI+RY+ RKY GL G LEE +D
Sbjct: 44 PEHLARNPFGEIPVLEDGDLTLYQSRAIARYIFRKYKPEFLGLGEGGSLEESAMVD 99
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 35.1 bits (77), Expect = 0.15
Identities = 43/193 (22%), Positives = 87/193 (45%), Gaps = 17/193 (8%)
Frame = +2
Query: 209 LAYGGQEFE----DKRISMDQWPEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYGL 376
L G+++E D I+ + PE + PFGQ+P L+ +S AIS+Y+ RK
Sbjct: 21 LEEAGEQYEVVPIDFSIAEHKSPEHTSRNPFGQVPALQDGDLILFESRAISKYVLRK--- 77
Query: 377 AGADLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEF-----RETKYQFL--- 532
++L ++ + + D+ A + H+++ +V + +T + +
Sbjct: 78 NNSELLKEHNLSDAAKV--DVWLEAESHHFDEPMSVVIYQCLILPVYFGGQTDAKVVEEN 135
Query: 533 IEKLNEILQKNGGHIALGKLTWGDFIFAGMFDYLKS---MLQEP--TLEEKYPIFKKTID 697
+EKL + Q + + GDF+ + + +L P + +++P+ K ID
Sbjct: 136 LEKLKKTFQVYEERLCKFRYLAGDFLSLADLSHFPTAYYLLATPHAAMLDEFPLVKAWID 195
Query: 698 TVLSLPKVKGYVD 736
+L+ P VK ++
Sbjct: 196 GMLARPSVKKVIE 208
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 34.3 bits (75), Expect = 0.26
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 5/159 (3%)
Frame = +2
Query: 263 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGR---KYGLAGADLEEDFEIDQNVEF-L 430
PE P G++P+LE +S AI+RY+ R L G+ L + I+Q ++F
Sbjct: 67 PEFLKMNPLGKIPVLETPEGAVFESNAIARYVARLKDNSSLCGSSLIDYSHIEQWMDFSA 126
Query: 431 NDIRANAAAVHYEK-DEAVKAKKLAEFRETKYQFLIEKLNEILQKNGGHIALGKLTWGDF 607
++ AN Y + L EF T + + LN L N ++ +T D
Sbjct: 127 TEVDANIGRWLYPRLGFGPYVPVLEEFAITSLKRSLGALNTHLASN-TYLVGHSVTLADI 185
Query: 608 IFAGMFDYLKSMLQEPTLEEKYPIFKKTIDTVLSLPKVK 724
+ Y + + ++P ++ T+++ P K
Sbjct: 186 VMTCNLYYGFVRILIKSFTSEFPHVERYFWTMVNQPNFK 224
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 34.3 bits (75), Expect = 0.26
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 263 PEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYGLAGADL 391
PE + PFGQMP + +S A+ RY+ RKY + A+L
Sbjct: 44 PEHLKRNPFGQMPAFQDGDLLLFESRAVGRYILRKYKTSEANL 86
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 31.5 bits (68), Expect = 1.9
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Frame = +2
Query: 278 KTPFGQMPLLEIDGKQYAQSIAISRYLGRKYG----LAGADLEEDFEIDQNVEFLNDIRA 445
++PFG++P E +S AI RY+ R Y L +LEE +D +E +
Sbjct: 48 RSPFGKIPAFEDGEVTLFESRAIQRYVLRNYNKPDLLREGNLEESAMVDMWME-VEAHHY 106
Query: 446 NAAAVHYEKDEAVKAKKLAEFRETK-YQFLIEKLNEILQKNGGHIALGKLTWGDFI 610
+ A H ++ +K R+ +EKL ++L+ ++ + GDF+
Sbjct: 107 DPAIFHIIRECVIKPMIGGGARDQAIVDENVEKLRKVLEVYERRLSESEYLAGDFV 162
>02_02_0359 -
9390175-9390416,9390924-9391044,9391069-9391410,
9392400-9392759
Length = 354
Score = 30.7 bits (66), Expect = 3.3
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 386 DLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEFRETKYQFLIEKL 544
DLEE E V+ +AA E+ V A +LAE + KY+ + E L
Sbjct: 111 DLEEHLEFLHTVQSQQRAEQDAAIARLEQSRLVLAMRLAEHQGKKYRVIDEAL 163
>09_06_0310 -
22212348-22212695,22213561-22213766,22213796-22213905,
22214351-22214427,22214466-22214486,22214518-22215651
Length = 631
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/54 (29%), Positives = 32/54 (59%)
Frame = +2
Query: 404 EIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEFRETKYQFLIEKLNEILQKN 565
E++ ++F + A A A +D A K+ KLA+ R T+ + +E++N L+++
Sbjct: 533 ELENKLKFKEETAAAAMAA---RDAAEKSLKLADMRSTRLRERLEEINRQLEES 583
>03_05_0468 - 24630701-24631399
Length = 232
Score = 29.9 bits (64), Expect = 5.7
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +2
Query: 152 NVVFYYFPVKALGEGPRMLLAYGGQEFEDK--RISMDQWPEIKPKTPFGQMPLLEIDGKQ 325
+VV V G R+ LA G +E+K ++ + GQ+P+L + GK
Sbjct: 7 SVVLINCAVSMYGNRVRIALARKGVAYEEKPENLAAKSALLLSSNPVHGQVPVLLVGGKP 66
Query: 326 YAQSIAISRYLGRKYGLAGADL 391
+S+ I ++ ++ G L
Sbjct: 67 VCESLVILEFIDEEFAGVGEPL 88
>11_04_0255 -
15422536-15422640,15422734-15422790,15422917-15423013,
15423155-15423222,15423299-15423344,15423467-15423621,
15423767-15423995,15424124-15424200,15425804-15425856,
15426082-15426139
Length = 314
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Frame = -2
Query: 276 GLISGHWSIDMRLSSNS--CP--P*ASNIRGPSPSAFT 175
GL+S HW + +R S N+ CP P ++ PSP T
Sbjct: 270 GLVSDHWHVGVRTSHNNSGCPSQPLLVLVQNPSPKVST 307
>01_06_0246 +
27845898-27846001,27846235-27846237,27846472-27846700,
27846814-27846968,27847091-27847136,27847233-27847324,
27847425-27847521,27847649-27847705,27847799-27847927
Length = 303
Score = 29.5 bits (63), Expect = 7.5
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = -2
Query: 276 GLISGHWSIDMRLS--SNSCP--P*ASNIRGPSPSAFT 175
GL+S HW + +R S ++SCP P ++ PSP T
Sbjct: 251 GLVSDHWHVGVRTSHTNSSCPSQPLLVLVQNPSPKVST 288
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 29.1 bits (62), Expect = 9.9
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Frame = +2
Query: 263 PEIKPKTPFGQMPLLEIDGKQYA-QSIAISRYLGRKYG---LAGADLEEDFEID 412
P+ + PFGQ+P L+ DG + +S AI +Y+ RK L DL+E +D
Sbjct: 44 PDHLARNPFGQVPALQ-DGDLFLWESRAICKYVCRKNKPELLKDGDLKESAMVD 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,233,924
Number of Sequences: 37544
Number of extensions: 504744
Number of successful extensions: 1228
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5023712764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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