Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_E02_e301_10.seq
(1558 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22) 71 3e-12
SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18) 68 2e-11
SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15) 65 1e-10
SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24) 61 3e-09
SB_54755| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-07
SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.016
SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10) 36 0.12
SB_48679| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.4
SB_683| Best HMM Match : zf-C2H2 (HMM E-Value=0.85) 31 3.3
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 30 4.4
SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5) 30 4.4
SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 5.8
SB_22182| Best HMM Match : DUF1626 (HMM E-Value=1.7) 30 5.8
>SB_19919| Best HMM Match : GST_N (HMM E-Value=4.7e-22)
Length = 79
Score = 70.5 bits (165), Expect = 3e-12
Identities = 34/77 (44%), Positives = 50/77 (64%), Gaps = 3/77 (3%)
Frame = +2
Query: 146 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK--TPFGQMPLLEIDG 319
MP+ YYF + E R++ A G EFED R++M +WP++K + PFGQ+PLL ID
Sbjct: 1 MPSYKLYYFNARGRAEPARLVFAAAGIEFEDNRMAMGEWPKVKKELHAPFGQVPLLVIDD 60
Query: 320 K-QYAQSIAISRYLGRK 367
K + AQS+AI ++ R+
Sbjct: 61 KIKLAQSLAIMTFIARE 77
>SB_28555| Best HMM Match : GST_N (HMM E-Value=3.5e-18)
Length = 195
Score = 68.1 bits (159), Expect = 2e-11
Identities = 61/203 (30%), Positives = 96/203 (47%), Gaps = 8/203 (3%)
Frame = +2
Query: 149 PNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKP--KTPFGQMPLLEI-DG 319
P YF +A E R+LL F D+R++ W +K + PFG++PLLEI DG
Sbjct: 3 PTYRVVYFDARARAECIRVLLHLADVPFTDERVAPPDWAAMKTSGRCPFGELPLLEISDG 62
Query: 320 KQYAQSIAISRYLGRKYGLAGADLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKL 499
++ AQS AI R+L +++ G D +N F K E VK +K
Sbjct: 63 RKLAQSHAIFRFLAKEH--EGGD-------SRNGAFF-------------KREHVKEQKS 100
Query: 500 AEFRETKYQFLIEKLNEILQKN---GGHIALGKLTWGDFIFAGMFD-YLKS-MLQEPTLE 664
EF E +E +N++ Q+N G++ K+T+ D F F+ ++ S L P
Sbjct: 101 KEFHEETLPKRLEFINKLFQENKGGKGYLVGDKITYADIDFFCFFNGFINSGKLDVPEQL 160
Query: 665 EKYPIFKKTIDTVLSLPKVKGYV 733
KYP+ + V++ K+ Y+
Sbjct: 161 SKYPLLVDLYNRVMNEKKILEYL 183
>SB_11982| Best HMM Match : GST_N (HMM E-Value=7.9e-15)
Length = 221
Score = 65.3 bits (152), Expect = 1e-10
Identities = 57/222 (25%), Positives = 101/222 (45%), Gaps = 22/222 (9%)
Frame = +2
Query: 146 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKP--KTPFGQMPLLEIDG 319
MPN YF + E R+ A GG +ED R++ ++W ++K KT G +P+LE+DG
Sbjct: 1 MPNYKLIYFNTRGRAEPTRLCFAAGGIPYEDVRLTGEEWTKMKAENKTIMGYLPVLEVDG 60
Query: 320 KQYAQSIAISRYLGRKYGL--------AGAD---LEEDFEIDQNVEFLNDI--------- 439
QY +S+AI R + GL A D L+E+F+ +Q++ DI
Sbjct: 61 IQYCESMAIFRLAAKLAGLCPTCPYEQARCDMKKLQEEFK-EQHLNKFWDIMERLLTAKC 119
Query: 440 RANAAAVHYEKDEAVKAKKLAEFRETKYQFLIEKLNEILQKNGGHIALGKLTWGDFIFAG 619
+ +A ++ ++ ++ + +++NE + L +LT+ D I
Sbjct: 120 NLDGSAQYFVGNKVIRTVNNTGGSFNQCSVKHKEMNEQATYQITTLFLFQLTYADIILFS 179
Query: 620 MFDYLKSMLQEPTLEEKYPIFKKTIDTVLSLPKVKGYVDAAP 745
D +SM P + E +P + V P +K +++ P
Sbjct: 180 TSDTFESMF--PGMLENFPGLRDLFKRVGENPGIKAWIEKRP 219
>SB_37695| Best HMM Match : GST_N (HMM E-Value=2.4e-24)
Length = 102
Score = 60.9 bits (141), Expect = 3e-09
Identities = 33/78 (42%), Positives = 47/78 (60%), Gaps = 4/78 (5%)
Frame = +2
Query: 146 MPNVVFYYFPVKALGEGPRMLLAYGGQEFEDKRI-SMDQWPEIKPK--TPFGQMPLLEID 316
MP+ +YF + E R+ A G E+EDKR ++W +KP+ PFGQ+PLL ID
Sbjct: 23 MPSYKLHYFNARGRAEPARLAFAAAGIEYEDKRFEGREEWLRVKPELDPPFGQVPLLVID 82
Query: 317 GK-QYAQSIAISRYLGRK 367
K + AQS+AI Y+ R+
Sbjct: 83 DKIKLAQSMAILAYVARE 100
>SB_54755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 269
Score = 41.1 bits (92), Expect(2) = 3e-07
Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
Frame = +2
Query: 365 KYGLAGADLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEFRETKYQFLIEKL 544
K LA +D D V+ D+ + +E DE + +F + +E +
Sbjct: 130 KSSLAPSDDYLQARCDMLVDNNKDMMDRLGEIVWELDEVRQEMLKKKFYDEILPVQMENI 189
Query: 545 NEILQKNGG---HIALGKLTWGDFIFAGMFD-YLKS-MLQEPTLEEKYPIFKKTIDTVLS 709
N++LQ+N G ++ K+T+ D F F+ Y+ L P KYP+ + V++
Sbjct: 190 NKLLQENNGGKGYLVGDKITYADIDFFCFFNGYINGGKLDVPEQFSKYPLLADLYNRVMN 249
Query: 710 LPKVKGYV 733
PK+ Y+
Sbjct: 250 KPKILEYL 257
Score = 32.7 bits (71), Expect(2) = 3e-07
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 167 YFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIK 274
YF V+A GE R+LL F ++R ++ WP +K
Sbjct: 95 YFDVRARGECIRVLLHLADVPFTEERHGLEDWPAVK 130
>SB_34627| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1925
Score = 38.3 bits (85), Expect = 0.016
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 3/114 (2%)
Frame = +2
Query: 371 GLAGADLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEFRETKYQFLIEKLNE 550
GLA ++ + + D V D H+EKDEA K + + T + L +
Sbjct: 323 GLAPSNSLDIAKCDMIVGAEEDFLTKKIQCHFEKDEAKKKELDEAIQNTHLPAFMGALTK 382
Query: 551 ILQKNG-GHIALGKLTWGDFIFAGMFDYLKS--MLQEPTLEEKYPIFKKTIDTV 703
IL++NG G + K+T+ D I + L S + + P L++ + DT+
Sbjct: 383 ILEENGTGFLVTDKMTYADIIVFNACNNLDSGALDKFPKLKQHHDRIANNPDTI 436
>SB_19860| Best HMM Match : GST_C (HMM E-Value=9.6e-10)
Length = 260
Score = 35.5 bits (78), Expect = 0.12
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Frame = +2
Query: 239 KRISMDQWPEIKPKTPFGQMPLLEIDGKQYAQSIAISRYLGRKYG-LAGADLEEDFEIDQ 415
+ ++ D ++ +PF +PLLE + S I RYL L G+DL + ++DQ
Sbjct: 30 EEVNHDAHTDLSGLSPFNTLPLLETKEGTFFSSNTIIRYLAASSDKLYGSDLFQRGQVDQ 89
Query: 416 NVEFLN-DIRANAAAVHYEKD--EAVKAKKLAEFRETKYQFLIEK 541
++ D A AAV K+ + AK +A+ K+ +EK
Sbjct: 90 WLDITTCDFEAAVAAVAIAKEGRDVEGAKIVADI--NKFLGFVEK 132
>SB_48679| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 31.9 bits (69), Expect = 1.4
Identities = 24/73 (32%), Positives = 33/73 (45%)
Frame = +2
Query: 332 QSIAISRYLGRKYGLAGADLEEDFEIDQNVEFLNDIRANAAAVHYEKDEAVKAKKLAEFR 511
QS AI RY+GRKY + G EE +D L + N A ++KA A+F
Sbjct: 19 QSNAILRYIGRKYDMCGKTEEEKVIVD----ILENQEENKPAYIQSAQSSIKA--FADFL 72
Query: 512 ETKYQFLIEKLNE 550
K + LN+
Sbjct: 73 GQKSYLAGDNLNQ 85
>SB_683| Best HMM Match : zf-C2H2 (HMM E-Value=0.85)
Length = 272
Score = 30.7 bits (66), Expect = 3.3
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = -1
Query: 679 DRVLLFKCRFLKHRLQVIEHTGEDEIA--------PSQLSKSDVAAVLLEYFIQFLNEEL 524
+++++ L+H E G++ IA PS+ SK D+A + EYF +E
Sbjct: 198 EKMIITVLERLRHENDCHETEGQESIATQESQDTKPSEFSKPDMAHLRREYFCADCKKEF 257
Query: 523 VFGLAEFCQFLGFHR 479
VF +E + HR
Sbjct: 258 VFTSSEILKHKRSHR 272
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 30.3 bits (65), Expect = 4.4
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = -1
Query: 730 VPLHFGKR*Y--CIYGLLKDRVLLFKCRFLKHRLQVIE 623
V H G++ + C+YGLLKDR+ C + H+LQ ++
Sbjct: 184 VDTHVGRQLFDECVYGLLKDRI----CVLVTHQLQYLK 217
>SB_16617| Best HMM Match : Vicilin_N (HMM E-Value=5.5)
Length = 547
Score = 30.3 bits (65), Expect = 4.4
Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 1/121 (0%)
Frame = +3
Query: 219 AGRNSKTNAYQWTNGLKSSPRPRSVKCRCWKLTVNSTLRASPSAGTSVASTASLVQT*RK 398
A R +KT+ Q + + PR K + K ASP + T S Q R+
Sbjct: 358 ASRKTKTSKPQDQDKQAARPRQAGRKTKTSKPQAQDKQAASPRQASRKTKT-SKQQDARQ 416
Query: 399 TSRLIRTWSSLTIFVQTPPP-SITRKTRR*KPRNWQNSARPNTSSSLRN*MKYSRRTAAT 575
SR +T Q P +RKT+ KP++ + + R +S + + + R T
Sbjct: 417 ASRKTKTRKPQDQDKQAARPRQASRKTKTSKPQDARRARRARRKTSKQQDARQASRQTKT 476
Query: 576 S 578
S
Sbjct: 477 S 477
>SB_25424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 29.9 bits (64), Expect = 5.8
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +2
Query: 155 VVFYYFPVKALGEGPRMLLAYGGQEFEDKRISMDQWPEIKPK 280
V +YF + EG R+++ G + + + + WP +K K
Sbjct: 54 VTLHYFGSRGKAEGIRLMMEDNGVLYAETNYTKEDWPTVKQK 95
>SB_22182| Best HMM Match : DUF1626 (HMM E-Value=1.7)
Length = 357
Score = 29.9 bits (64), Expect = 5.8
Identities = 29/101 (28%), Positives = 44/101 (43%)
Frame = +2
Query: 428 LNDIRANAAAVHYEKDEAVKAKKLAEFRETKYQFLIEKLNEILQKNGGHIALGKLTWGDF 607
+N R ++ E +KAKK E +ET Q ++ LN+ K + L L
Sbjct: 83 VNSTRKGVVSLCAEVASLLKAKKRQESKETSLQMSVKHLNKETYKVVHNRGLADLDIRRK 142
Query: 608 IFAGMFDYLKSMLQEPTLEEKYPIFKKTIDTVLSLPKVKGY 730
IF+ YL ++ + KKT D VL + VKG+
Sbjct: 143 IFSSEERYLALGTTIDLENRRWFLVKKT-DIVLHI--VKGF 180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,018,504
Number of Sequences: 59808
Number of extensions: 551921
Number of successful extensions: 1381
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1372
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 5082457441
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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