Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_E01_e293_09.seq
(1571 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 292 1e-77
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 247 5e-64
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 210 8e-53
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 187 8e-46
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 170 1e-40
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 158 4e-37
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 138 4e-31
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 137 9e-31
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 134 8e-30
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 128 4e-28
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 127 7e-28
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 126 1e-27
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 126 1e-27
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 108 3e-22
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 108 3e-22
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 107 6e-22
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 95 3e-18
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 93 2e-17
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 92 3e-17
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 92 3e-17
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 92 3e-17
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 92 3e-17
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 77 2e-12
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 65 6e-09
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 65 6e-09
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 55 6e-06
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 53 2e-05
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 41 0.10
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 37 1.3
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 2.9
UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic D-r... 36 3.9
UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2; C... 35 5.1
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 35 5.1
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 34 8.9
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 292 bits (717), Expect = 1e-77
Identities = 137/151 (90%), Positives = 147/151 (97%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 247 bits (605), Expect = 5e-64
Identities = 118/151 (78%), Positives = 130/151 (86%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMH+ GKGIS SALPY+RS P+WLK T DV E I K KKGLTPSQIGV+LRDSHG+
Sbjct: 1 MGRMHSRGKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHGI 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
QV+ VTG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVES
Sbjct: 61 PQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYK LPP WKYES+TAS LVA
Sbjct: 121 RIHRLARYYKKTKKLPPVWKYESTTASTLVA 151
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 210 bits (513), Expect = 8e-53
Identities = 97/151 (64%), Positives = 122/151 (80%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
M RMH G+G + SALPYRR+ P WLK+ + +V + + K +KG+ PSQIG+ LRDS G+
Sbjct: 1 MVRMHGNGRGKASSALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMGI 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQV+ VTG+KILRI+K GLAP++PEDLY+L+K+A MRKHLER+ D+D+K+RLILVES
Sbjct: 61 AQVKNVTGRKILRILKHNGLAPEIPEDLYFLVKRATQMRKHLERHTTDRDTKYRLILVES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYK LPP WKYESSTASA+VA
Sbjct: 121 RIHRLARYYKRVKQLPPTWKYESSTASAMVA 151
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 187 bits (455), Expect = 8e-46
Identities = 99/151 (65%), Positives = 111/151 (73%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MG MHAP K +SQS LPY SV WLK T+DD+KEQI+KL KKGLTPSQIGV LRD+HG
Sbjct: 1 MGAMHAPRKALSQSVLPYHHSVLMWLKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTHG- 59
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
LA DLP DLY+LIKKAVA++KHLERNRKDKD+KF L L ES
Sbjct: 60 -------------------LALDLPGDLYHLIKKAVAVQKHLERNRKDKDAKFCLSLTES 100
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIH LARY KTK +LPP+WKYES +ASALVA
Sbjct: 101 RIHPLARYCKTKRMLPPSWKYESPSASALVA 131
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 170 bits (413), Expect = 1e-40
Identities = 75/136 (55%), Positives = 104/136 (76%)
Frame = +2
Query: 143 KGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTG 322
KGI+ S +P+ R+ P W+K + + + E I L KKGL PSQIG LRDS G+ V+ + G
Sbjct: 6 KGIASSLIPFERNAPLWVKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAG 65
Query: 323 KKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 502
+ I++I+K GL P++PEDL++LIKKA+ ++KHLERN+KDKDSKFRLIL ES+IHRL+RY
Sbjct: 66 RNIVKILKKNGLNPEIPEDLFFLIKKAINIKKHLERNKKDKDSKFRLILTESKIHRLSRY 125
Query: 503 YKTKSVLPPNWKYESS 550
YK +P NW+++SS
Sbjct: 126 YKRIQRIPINWRFDSS 141
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 158 bits (383), Expect = 4e-37
Identities = 74/150 (49%), Positives = 105/150 (70%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
M RMHA +G S S P R+ VP W++ T + V++ + +L KKG +QIG++LRD++G+
Sbjct: 1 MARMHARKRGRSGSKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYGI 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
V+ +TGKKI +IMK GL P +PEDL L+++AV +RKHLE++ KD SK L L+ES
Sbjct: 61 PDVKLITGKKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALV 568
+I RL +YYK+K VLP +W+Y TA LV
Sbjct: 121 KIRRLVKYYKSKGVLPADWRYTPETARLLV 150
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 138 bits (334), Expect = 4e-31
Identities = 61/140 (43%), Positives = 88/140 (62%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
M +MH+ GKG S S PY + PTWL + D++K + ++G KG+ IG LRD +G+
Sbjct: 1 MAKMHSSGKGRSGSVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYGI 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
+ V G+ I R ++ G+ P +P DL L+ +A +R HL RKD +K+RLILV S
Sbjct: 61 GKASDVLGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVSS 120
Query: 479 RIHRLARYYKTKSVLPPNWK 538
R++R+ARYYK K +P NWK
Sbjct: 121 RMYRVARYYKRKMRIPGNWK 140
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 137 bits (331), Expect = 9e-31
Identities = 66/141 (46%), Positives = 97/141 (68%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
M R+HA +G S S YR S P W+ ++ ++V++++ +L +G PS IG++LRD +G+
Sbjct: 1 MARIHARRRGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYGI 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
V+ VTGKKI +I+K G+ PEDL LIKKA+ +R HLE +RKDK ++ L L+E+
Sbjct: 61 PSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIEA 120
Query: 479 RIHRLARYYKTKSVLPPNWKY 541
+I RL+ YYK K VLP +WKY
Sbjct: 121 KIWRLSSYYKEKGVLPADWKY 141
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 134 bits (323), Expect = 8e-30
Identities = 69/157 (43%), Positives = 99/157 (63%), Gaps = 7/157 (4%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
M RMHA +G S S P R + P WL+ T +D++ + KL K+G + + IG +LRD +G+
Sbjct: 1 MARMHARKRGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYGI 60
Query: 299 AQVRFVT-----GKK--ILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKF 457
V+ +K I RI++ GLAP++PEDL +LIK+AV +RKHLE++ KD S
Sbjct: 61 PTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSMR 120
Query: 458 RLILVESRIHRLARYYKTKSVLPPNWKYESSTASALV 568
L L+ES+I RL +YYK K LP +W+Y+ A LV
Sbjct: 121 GLQLIESKIRRLVKYYKRKGKLPKDWRYDPEQAKLLV 157
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 128 bits (309), Expect = 4e-28
Identities = 62/148 (41%), Positives = 90/148 (60%), Gaps = 2/148 (1%)
Frame = +2
Query: 119 MGRMHAPGK--GISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSH 292
M R+HA + G S S P R + P W + V+ +I +L K+G +P+ IG++LRD +
Sbjct: 1 MSRLHAHKRYHGQSGSKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQY 60
Query: 293 GVAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 472
G+ VR GK + ++ GL PD+P DL YL+K+A + KH+E N +D +K L+
Sbjct: 61 GIPDVRLYIGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLI 120
Query: 473 ESRIHRLARYYKTKSVLPPNWKYESSTA 556
S+IHRLA+YYK K VLP +WKY A
Sbjct: 121 ISKIHRLAKYYKRKGVLPKDWKYSIEIA 148
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 127 bits (307), Expect = 7e-28
Identities = 64/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKG-LTPSQIGVMLRDSHG 295
MG+M++ GKGIS + +PYR+ W LT+ ++ + I L K L PS+IG++LRD
Sbjct: 1 MGKMYSKGKGISSTTVPYRKYSCEWKGLTSQNLIKIIANLAKNNNLPPSKIGLVLRDEKL 60
Query: 296 VAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 475
V R ++G I +I++ GL P +PEDL+YLIKKA ++ HL + D +++ L L+E
Sbjct: 61 VVDTRNISGMNISKILRLKGLVPLVPEDLFYLIKKANKIKAHLSDFKHDLANRYHLNLIE 120
Query: 476 SRIHRLARYYKTKSVLPPNWKYESS 550
S I+RL+RYYK LP NWKY S+
Sbjct: 121 SHIYRLSRYYKRIFRLPKNWKYISN 145
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 126 bits (305), Expect = 1e-27
Identities = 58/146 (39%), Positives = 90/146 (61%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMH G S S P P+W+ + +++E + K K GLTPSQIG+ LRD H +
Sbjct: 1 MGRMHTHRHGKSHSIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHSI 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
++ +T K I I++ L ++PEDL ++KKAV +++HL+ N+ D+ + L L+E+
Sbjct: 61 PLIKPITKKTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIEA 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTA 556
++HRL+ YYK +P WKY+S A
Sbjct: 121 KVHRLSVYYKKIGRIPATWKYKSVVA 146
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 126 bits (305), Expect = 1e-27
Identities = 60/146 (41%), Positives = 91/146 (62%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGR+H+ G S S P P+W++ +V++ I K K+GL PSQIG LRD H +
Sbjct: 1 MGRLHSHRHGKSHSIRPSSPKAPSWIQ-GPGEVEDLIVKYAKEGLAPSQIGSKLRDQHAI 59
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
R +TGK + +IM+ G P+LPEDL +++KAV +++HL N+ D+ + L L+E+
Sbjct: 60 PLTRPITGKSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIEA 119
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTA 556
++HRL YYK +P +WKY+S A
Sbjct: 120 KVHRLDVYYKRIGRIPKDWKYKSVVA 145
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 108 bits (260), Expect = 3e-22
Identities = 49/61 (80%), Positives = 55/61 (90%)
Frame = +2
Query: 356 LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNW 535
L P++PEDLY+LIKKAVA+RKHLER+RKDKDSKFRLI+VESRIHRLARYYK LPP W
Sbjct: 69 LGPEIPEDLYHLIKKAVAIRKHLERSRKDKDSKFRLIVVESRIHRLARYYKRTKKLPPVW 128
Query: 536 K 538
K
Sbjct: 129 K 129
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 108 bits (260), Expect = 3e-22
Identities = 55/142 (38%), Positives = 83/142 (58%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
M RMH +G S S R P+W++ + D++KE I K+ K+G+T S IG+ LRD + +
Sbjct: 1 MARMHTRKRGRSGSKRIEVRERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYAI 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
R V K+ +++K L D+PEDL LI++ KHL N+ D ++K + L+ S
Sbjct: 61 PGTRPVLHMKLGQVLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIMS 120
Query: 479 RIHRLARYYKTKSVLPPNWKYE 544
++ RL RYYK S LP +W E
Sbjct: 121 KMLRLIRYYKRTSRLPQDWSLE 142
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 107 bits (258), Expect = 6e-22
Identities = 54/150 (36%), Positives = 84/150 (56%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
M RM+A +G S S+ P+ P W A +++ I + K G++ +QIG +LRD H V
Sbjct: 1 MARMYASKRGKSGSSKPFMTEAPEWSNKDAKEIESLILQYFKDGMSTAQIGTILRDKHAV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
VR V GK+I ++ + PEDL L+++AVA+ +HL N +D +K L L E+
Sbjct: 61 PNVRLVLGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTEA 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALV 568
+I RL YYK + L +W+Y+ +V
Sbjct: 121 KIRRLGNYYKAEGRLDSDWRYKRDQLRLIV 150
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 95.5 bits (227), Expect = 3e-18
Identities = 44/59 (74%), Positives = 51/59 (86%)
Frame = +2
Query: 110 AANMGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRD 286
AA GR+H PGKG+S+SAL Y SVPTWLKLT+D+VKEQI+KL KKGLTP QIGV+LRD
Sbjct: 211 AAITGRIHVPGKGLSRSALLYHHSVPTWLKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 93.1 bits (221), Expect = 2e-17
Identities = 53/150 (35%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDS--H 292
M RMH +G S S P P W + D ++ ++ +L ++G +PS+IG+ LRD
Sbjct: 1 MARMHTRRRGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGVQ 60
Query: 293 G--VAQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLI 466
G + V TGKK+ I++ PDLPEDL L+++AV +R H++ N D +K L
Sbjct: 61 GTPIPDVSLATGKKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRALQ 120
Query: 467 LVESRIHRLARYYKTKSVLPPNWKYESSTA 556
+S+I RL YY+ V N+ Y A
Sbjct: 121 NTQSKIRRLIDYYRGDEV-DENFTYSYDNA 149
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 92.3 bits (219), Expect = 3e-17
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 670 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEXARTDRPS 795
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSE ARTDRPS
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 109
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 92.3 bits (219), Expect = 3e-17
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 670 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEXARTDRPS 795
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSE ARTDRPS
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 63
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 92.3 bits (219), Expect = 3e-17
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 670 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEXARTDRPS 795
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSE ARTDRPS
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 67
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 92.3 bits (219), Expect = 3e-17
Identities = 41/42 (97%), Positives = 41/42 (97%)
Frame = +1
Query: 670 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEXARTDRPS 795
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSE ARTDRPS
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 49
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 76.6 bits (180), Expect = 2e-12
Identities = 39/55 (70%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
Frame = +2
Query: 668 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAXRPAPIALPT--VAQPEWRMA 826
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI+ A P+ + +WRMA
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIS-EEARTDRPSQQLRSLKWRMA 58
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 64.9 bits (151), Expect = 6e-09
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = +2
Query: 110 AANMGRMHAPGKGISQSALPYRRSVPTWLKLTADDVK 220
+A +GRMHAPGKG+SQSALPYRRSV WLKL +DDVK
Sbjct: 441 SAIVGRMHAPGKGLSQSALPYRRSVLMWLKLMSDDVK 477
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 64.9 bits (151), Expect = 6e-09
Identities = 27/42 (64%), Positives = 32/42 (76%)
Frame = +1
Query: 670 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEXARTDRPS 795
L +L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPS 56
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 54.8 bits (126), Expect = 6e-06
Identities = 20/44 (45%), Positives = 30/44 (68%)
Frame = +1
Query: 670 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEXARTDRPSNS 801
LA +L R DW+NP +T +NRL +H P WR+++ AR PS++
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPSDA 61
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 52.8 bits (121), Expect = 2e-05
Identities = 23/40 (57%), Positives = 27/40 (67%)
Frame = +1
Query: 679 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEXARTDRPSN 798
VL R DW N +T LNRL AHP FASWR+ AR + PS+
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSS 56
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 40.7 bits (91), Expect = 0.10
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +1
Query: 679 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEXARTDRPS 795
++ RRDWENP Q+N++ AH P ++ E AR + S
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQS 45
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.1 bits (82), Expect = 1.3
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 617 RGGARYPIRPIVSRIT 664
RGGARYPIRPIVSRIT
Sbjct: 260 RGGARYPIRPIVSRIT 275
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 2.9
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 679 VLQRRDWENPGVTQLNRLAAHPP 747
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic
D-ribose-binding protein; n=4; Rhizobiales|Rep: Ribose
ABC transporter, periplasmic D-ribose-binding protein -
Brucella suis
Length = 355
Score = 35.5 bits (78), Expect = 3.9
Identities = 16/44 (36%), Positives = 28/44 (63%)
Frame = +2
Query: 179 SVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVR 310
+VPTW+K T D + +++ +L K+GL +M+ D+ G AQ +
Sbjct: 57 AVPTWMKQTEDTIVDEVAQLKKEGLVKD---LMITDAQGNAQTQ 97
>UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2;
Cryptosporidium|Rep: 3CCCH domain containing protein -
Cryptosporidium parvum Iowa II
Length = 591
Score = 35.1 bits (77), Expect = 5.1
Identities = 23/64 (35%), Positives = 34/64 (53%)
Frame = +2
Query: 188 TWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKILRIMKAMGLAPD 367
T L++T D K + + K G+ GV+ R +HG A++R T K +LR K L P
Sbjct: 154 TELRVTNDFYKTSVCRYWKMGVK-CDAGVLCRHAHGEAELRKKTNKHLLR-RKDDQLPPS 211
Query: 368 LPED 379
+ ED
Sbjct: 212 IRED 215
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 35.1 bits (77), Expect = 5.1
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 389 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYKTKSVLPPNWKY 541
L K + + +HL+ KDK +K L L+ + +L RY + K P W++
Sbjct: 238 LTAKIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLRKKERGGPRWQH 288
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 34.3 bits (75), Expect = 8.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +1
Query: 691 RDWENPGVTQLNRLAAHPPFASWRNSEXA 777
R+WEN +TQ+NR H P+ ++ + E A
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQA 31
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,024,536,201
Number of Sequences: 1657284
Number of extensions: 19832275
Number of successful extensions: 45965
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 44097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45953
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 168974100025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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