Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_E01_e293_09.seq
(1571 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13 pro... 292 2e-78
L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13 pro... 292 2e-78
D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13 pro... 292 2e-78
BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13 p... 292 2e-78
BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13 p... 292 2e-78
BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13 p... 292 2e-78
BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13 p... 292 2e-78
BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13 p... 292 2e-78
L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13 pro... 217 1e-55
AL596244-1|CAI39809.1| 451|Homo sapiens tubulin tyrosine ligase... 32 5.0
AL445587-1|CAI40705.1| 451|Homo sapiens tubulin tyrosine ligase... 32 5.0
AL442634-1|CAI39983.1| 451|Homo sapiens tubulin tyrosine ligase... 32 5.0
DQ201638-1|ABA27097.1| 527|Homo sapiens oxidative-stress respon... 32 6.6
BC008726-1|AAH08726.1| 527|Homo sapiens oxidative-stress respon... 32 6.6
AF087893-1|AAP97192.1| 295|Homo sapiens DCHT2 protein. 32 6.6
AB029024-1|BAA83053.2| 467|Homo sapiens KIAA1101 protein protein. 32 6.6
AB017642-1|BAA75674.1| 527|Homo sapiens oxidative-stress respon... 32 6.6
>X79239-1|CAA55821.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 292 bits (717), Expect = 2e-78
Identities = 137/151 (90%), Positives = 147/151 (97%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>L01124-1|AAA60283.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 292 bits (717), Expect = 2e-78
Identities = 137/151 (90%), Positives = 147/151 (97%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>D88010-1|BAA13528.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 292 bits (717), Expect = 2e-78
Identities = 137/151 (90%), Positives = 147/151 (97%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC100032-1|AAI00033.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 292 bits (717), Expect = 2e-78
Identities = 137/151 (90%), Positives = 147/151 (97%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC066322-1|AAH66322.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 292 bits (717), Expect = 2e-78
Identities = 137/151 (90%), Positives = 147/151 (97%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC029732-1|AAH29732.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 292 bits (717), Expect = 2e-78
Identities = 137/151 (90%), Positives = 147/151 (97%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC006772-1|AAH06772.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 292 bits (717), Expect = 2e-78
Identities = 137/151 (90%), Positives = 147/151 (97%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>BC000475-1|AAH00475.1| 151|Homo sapiens ribosomal protein S13
protein.
Length = 151
Score = 292 bits (717), Expect = 2e-78
Identities = 137/151 (90%), Positives = 147/151 (97%)
Frame = +2
Query: 119 MGRMHAPGKGISQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGV 298
MGRMHAPGKG+SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGV
Sbjct: 1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGV 60
Query: 299 AQVRFVTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 478
AQVRFVTG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ES
Sbjct: 61 AQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIES 120
Query: 479 RIHRLARYYKTKSVLPPNWKYESSTASALVA 571
RIHRLARYYKTK VLPPNWKYESSTASALVA
Sbjct: 121 RIHRLARYYKTKRVLPPNWKYESSTASALVA 151
>L05090-1|AAC15854.1| 116|Homo sapiens ribosomal protein S13
protein.
Length = 116
Score = 217 bits (529), Expect = 1e-55
Identities = 103/116 (88%), Positives = 112/116 (96%)
Frame = +2
Query: 152 SQSALPYRRSVPTWLKLTADDVKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFVTGKKI 331
SQSALPYRRSVPTWLKLT+DDVKEQI+KL KKGLTPSQIGV+LRDSHGVAQVRFVTG KI
Sbjct: 1 SQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKI 60
Query: 332 LRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLAR 499
LRI+K+ GLA DLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+ESRIHRLAR
Sbjct: 61 LRILKSKGLASDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIESRIHRLAR 116
>AL596244-1|CAI39809.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 32.3 bits (70), Expect = 5.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 258 GVRPFLPSLKICS--LTSSAVSFNQVGTLRRYGSADWDIPLPGACIRPILAAFYYIA 94
G R F+ S K+ S L+ +AV + RR+ S D G C++ + AF+++A
Sbjct: 313 GFRTFIRSCKLSSSSLSMAAVDILYIDITRRWNSMTLDQRDSGMCLQAFVEAFFFLA 369
>AL445587-1|CAI40705.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 32.3 bits (70), Expect = 5.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 258 GVRPFLPSLKICS--LTSSAVSFNQVGTLRRYGSADWDIPLPGACIRPILAAFYYIA 94
G R F+ S K+ S L+ +AV + RR+ S D G C++ + AF+++A
Sbjct: 313 GFRTFIRSCKLSSSSLSMAAVDILYIDITRRWNSMTLDQRDSGMCLQAFVEAFFFLA 369
>AL442634-1|CAI39983.1| 451|Homo sapiens tubulin tyrosine
ligase-like family, member 11 protein.
Length = 451
Score = 32.3 bits (70), Expect = 5.0
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Frame = -3
Query: 258 GVRPFLPSLKICS--LTSSAVSFNQVGTLRRYGSADWDIPLPGACIRPILAAFYYIA 94
G R F+ S K+ S L+ +AV + RR+ S D G C++ + AF+++A
Sbjct: 313 GFRTFIRSCKLSSSSLSMAAVDILYIDITRRWNSMTLDQRDSGMCLQAFVEAFFFLA 369
>DQ201638-1|ABA27097.1| 527|Homo sapiens oxidative-stress
responsive 1 protein.
Length = 527
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 698 GKTLALPNLIALQHIPLSPAGVIAXRPAPIALPTVAQP 811
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 379 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 414
>BC008726-1|AAH08726.1| 527|Homo sapiens oxidative-stress
responsive 1 protein.
Length = 527
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 698 GKTLALPNLIALQHIPLSPAGVIAXRPAPIALPTVAQP 811
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 379 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 414
>AF087893-1|AAP97192.1| 295|Homo sapiens DCHT2 protein.
Length = 295
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 698 GKTLALPNLIALQHIPLSPAGVIAXRPAPIALPTVAQP 811
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 147 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 182
>AB029024-1|BAA83053.2| 467|Homo sapiens KIAA1101 protein protein.
Length = 467
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 698 GKTLALPNLIALQHIPLSPAGVIAXRPAPIALPTVAQP 811
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 319 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 354
>AB017642-1|BAA75674.1| 527|Homo sapiens oxidative-stress
responsive 1 protein.
Length = 527
Score = 31.9 bits (69), Expect = 6.6
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +2
Query: 698 GKTLALPNLIALQHIPLSPAGVIAXRPAPIALPTVAQP 811
G L +P I+ H+P PAG IA +P ++LP A+P
Sbjct: 379 GTLLQVPEQISA-HLP-QPAGQIATQPTQVSLPPTAEP 414
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,926,549
Number of Sequences: 237096
Number of extensions: 3224019
Number of successful extensions: 9319
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 9051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9319
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23411404302
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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