Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_D12_e380_08.seq
         (1516 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q2IHA5 Cluster: Putative uncharacterized protein; n=1; ...    35   4.9  
UniRef50_UPI00006CBEEF Cluster: hypothetical protein TTHERM_0030...    35   6.4  
UniRef50_A0V080 Cluster: Putative uncharacterized protein; n=1; ...    34   8.5  
UniRef50_Q9S9J4 Cluster: T23K8.5; n=4; Arabidopsis thaliana|Rep:...    34   8.5  

>UniRef50_Q2IHA5 Cluster: Putative uncharacterized protein; n=1;
            Anaeromyxobacter dehalogenans 2CP-C|Rep: Putative
            uncharacterized protein - Anaeromyxobacter dehalogenans
            (strain 2CP-C)
          Length = 359

 Score = 35.1 bits (77), Expect = 4.9
 Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 1/56 (1%)
 Frame = +1

Query: 1270 PXGGVXGXPXXXPXGNXXGPXXPXX-GGXXXPXPXXXXXXEKGPXXPXPLXGGWGP 1434
            P G V G P   P G    P  P   GG   P P        GP  P    GGWGP
Sbjct: 70   PGGPVWGAPPPPPPGGELPPPPPPPPGGYGAPPPAW------GPPPPSGAPGGWGP 119


>UniRef50_UPI00006CBEEF Cluster: hypothetical protein TTHERM_00307640;
            n=1; Tetrahymena thermophila SB210|Rep: hypothetical
            protein TTHERM_00307640 - Tetrahymena thermophila SB210
          Length = 1595

 Score = 34.7 bits (76), Expect = 6.4
 Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
 Frame = +2

Query: 296  RQSDSMSVRQYVRQHDYATV*TVIINIENTFDN--ETTRQLVSTTDISDRETYYIYLYIN 469
            +Q   M + Q+V+ +    +     N  + + N  + T QL++  D+S++   Y YLY N
Sbjct: 825  QQQQQMDMPQFVQNNLAQNIQNYTSNQYDPYSNYNQITEQLINVDDLSNQ---YSYLYTN 881

Query: 470  NKYCN 484
            N YC+
Sbjct: 882  NPYCH 886


>UniRef50_A0V080 Cluster: Putative uncharacterized protein; n=1;
           Clostridium cellulolyticum H10|Rep: Putative
           uncharacterized protein - Clostridium cellulolyticum H10
          Length = 388

 Score = 34.3 bits (75), Expect = 8.5
 Identities = 24/78 (30%), Positives = 37/78 (47%)
 Frame = +2

Query: 350 TV*TVIINIENTFDNETTRQLVSTTDISDRETYYIYLYINNKYCNYNSLLLILYTSVE*Y 529
           T+ T  I++ N F N      V+     D +  Y YL I+++ CN N L+     SVE  
Sbjct: 5   TLITNDIDLYNVFSNSKLFSEVNIASSLDEKIEYDYLVISDRICNINELI----QSVEKG 60

Query: 530 FSAKYVYVVLHSVSDSEA 583
             AK +  +L S   S++
Sbjct: 61  IRAKKITYLLSSAKGSQS 78


>UniRef50_Q9S9J4 Cluster: T23K8.5; n=4; Arabidopsis thaliana|Rep:
           T23K8.5 - Arabidopsis thaliana (Mouse-ear cress)
          Length = 331

 Score = 34.3 bits (75), Expect = 8.5
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +3

Query: 594 EVPYKMV*NFYSVRYYCRSFDELCLESILMVYNVNIMIIEKK*ICRNKRFVINPIEHLPG 773
           E  Y ++ N  S+R Y  +F E   E+I+    +N+ ++  K  C  + +V   I +LP 
Sbjct: 154 ETSYGIIINANSLRVYKSAFKEFTFENIIKASMINVKMLCDKEGCGKRNYVDTMISNLPS 213

Query: 774 XY 779
            +
Sbjct: 214 AF 215


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,127,002,306
Number of Sequences: 1657284
Number of extensions: 19388641
Number of successful extensions: 38856
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 36559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38714
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 161311790000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)