BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= 030723E4_D12_e380_08.seq (1516 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. 29 0.14 AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. 29 0.14 AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. 29 0.14 DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 25 1.7 AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 23 6.9 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 6.9 AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc fi... 23 6.9 >EF625896-1|ABR45903.1| 683|Apis mellifera hexamerin protein. Length = 683 Score = 28.7 bits (61), Expect = 0.14 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -3 Query: 755 GVNNKSLISTYLLLFYDHYVNIIHH*NAFQAKFIE*PTIIPYRIKILNHLVRHFHVTV-- 582 GV+ +S+ L+ ++DH+ +++++ + Q+ T+I R LNH +H+ V Sbjct: 447 GVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIVVNS 506 Query: 581 PRNLRHYVR 555 +N++ VR Sbjct: 507 DKNVKGMVR 515 >AY601637-1|AAT11850.1| 683|Apis mellifera hexamerin 70b protein. Length = 683 Score = 28.7 bits (61), Expect = 0.14 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -3 Query: 755 GVNNKSLISTYLLLFYDHYVNIIHH*NAFQAKFIE*PTIIPYRIKILNHLVRHFHVTV-- 582 GV+ +S+ L+ ++DH+ +++++ + Q+ T+I R LNH +H+ V Sbjct: 447 GVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIVVNS 506 Query: 581 PRNLRHYVR 555 +N++ VR Sbjct: 507 DKNVKGMVR 515 >AF134821-1|AAD40236.1| 226|Apis mellifera hexamerin protein. Length = 226 Score = 28.7 bits (61), Expect = 0.14 Identities = 18/69 (26%), Positives = 38/69 (55%), Gaps = 2/69 (2%) Frame = -3 Query: 755 GVNNKSLISTYLLLFYDHYVNIIHH*NAFQAKFIE*PTIIPYRIKILNHLVRHFHVTV-- 582 GV+ +S+ L+ ++DH+ +++++ + Q+ T+I R LNH +H+ V Sbjct: 73 GVSIESVTVDKLITYFDHFESMLNNGVSIQSHAKAKNTMIKARQYRLNHKPFTYHIVVNS 132 Query: 581 PRNLRHYVR 555 +N++ VR Sbjct: 133 DKNVKGMVR 141 >DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex determiner protein. Length = 182 Score = 25.0 bits (52), Expect = 1.7 Identities = 12/37 (32%), Positives = 18/37 (48%) Frame = +2 Query: 389 DNETTRQLVSTTDISDRETYYIYLYINNKYCNYNSLL 499 + E +R+ + +S+ Y Y NN Y NYN L Sbjct: 72 ERERSREPKIISSLSNNYNYSNYNNYNNNYNNYNKKL 108 >AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex determiner protein. Length = 425 Score = 23.0 bits (47), Expect = 6.9 Identities = 10/35 (28%), Positives = 18/35 (51%) Frame = +2 Query: 389 DNETTRQLVSTTDISDRETYYIYLYINNKYCNYNS 493 + E +++ + +S+ Y Y NN Y NYN+ Sbjct: 305 ERERSKEPKIISSLSNNYKYSNYNNYNNNYNNYNN 339 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 23.0 bits (47), Expect = 6.9 Identities = 9/27 (33%), Positives = 15/27 (55%) Frame = +2 Query: 368 INIENTFDNETTRQLVSTTDISDRETY 448 +N+E NE +L+ T ++DR Y Sbjct: 1081 LNVETAKTNEEMWELIDTEKLTDRLPY 1107 >AB208107-1|BAE72139.1| 71|Apis mellifera Broad complex zinc finger domain-Z2 isoform protein. Length = 71 Score = 23.0 bits (47), Expect = 6.9 Identities = 9/28 (32%), Positives = 16/28 (57%) Frame = +2 Query: 431 SDRETYYIYLYINNKYCNYNSLLLILYT 514 ++R+ Y + YC+ NSL+ +YT Sbjct: 30 AERQEEYRCVICERVYCSRNSLMTHIYT 57 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 335,499 Number of Sequences: 438 Number of extensions: 6872 Number of successful extensions: 24 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 23 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 24 length of database: 146,343 effective HSP length: 61 effective length of database: 119,625 effective search space used: 52993875 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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