Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_D10_e364_08.seq
(1502 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31; Eukary... 118 4e-25
UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep: S... 114 5e-24
UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66; Eukary... 106 1e-21
UniRef50_P90983 Cluster: Ribosomal protein, small subunit protei... 99 1e-19
UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal ... 95 6e-18
UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4; Eukaryo... 93 2e-17
UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=... 89 2e-16
UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellul... 85 3e-15
UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces cere... 84 8e-15
UniRef50_Q1DQB3 Cluster: Predicted protein; n=4; Pezizomycotina|... 82 3e-14
UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protei... 80 2e-13
UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila m... 78 7e-13
UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|R... 73 2e-11
UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n... 71 6e-11
UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30; Eukary... 71 8e-11
UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7; Methan... 68 7e-10
UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5; T... 67 1e-09
UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal ... 66 3e-09
UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1; ... 65 4e-09
UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4; Magnoli... 65 4e-09
UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellul... 62 4e-08
UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11; Therm... 59 3e-07
UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n... 58 6e-07
UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2; Archae... 58 8e-07
UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1; Encepha... 56 2e-06
UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2; Tr... 52 3e-05
UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37; Eukary... 52 5e-05
UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12; Archa... 52 5e-05
UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10; Archa... 51 7e-05
UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lambli... 49 3e-04
UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8; Euryar... 48 8e-04
UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3; ... 46 0.003
UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3; Haloba... 45 0.006
UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=... 43 0.024
UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to UBIQUITIN-... 40 0.13
UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n... 40 0.13
UniRef50_UPI000023DF20 Cluster: hypothetical protein FG07181.1; ... 38 0.90
UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;... 37 1.6
UniRef50_Q5D8K9 Cluster: SJCHGC02785 protein; n=1; Schistosoma j... 36 3.6
UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, wh... 34 8.4
>UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31;
Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila
melanogaster (Fruit fly)
Length = 56
Score = 118 bits (284), Expect = 4e-25
Identities = 49/56 (87%), Positives = 52/56 (92%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
MG A +WYSHPR+YGQGSR CRACSNRHGLIRKYGLNICRQC REYA+DIGFKKLD
Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 56
>UniRef50_Q4KTB1 Cluster: S30-ubiquitin-like; n=4; Metazoa|Rep:
S30-ubiquitin-like - Suberites domuncula (Sponge)
Length = 134
Score = 114 bits (275), Expect = 5e-24
Identities = 60/132 (45%), Positives = 79/132 (59%), Gaps = 2/132 (1%)
Frame = +1
Query: 91 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--S 264
MQ+ ++G + H ++V+ + + +K+ L L + E+ LS G PLED LV E+
Sbjct: 1 MQVFVQGGALHAINVSEETTFNQLKSELVLSEGITVEDQVLSYGGVPLEDDTLVCEIVPE 60
Query: 265 STELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQ 444
L L V ++GGKVHGSLARAGKV+GQTP +QYNRRFVNVV
Sbjct: 61 LATLSLAVRVVGGKVHGSLARAGKVRGQTPKVEAQEKKKKKTGRAKRRMQYNRRFVNVVA 120
Query: 445 TFGRRRGPNSNS 480
FGRRRGPNSN+
Sbjct: 121 QFGRRRGPNSNA 132
>UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66;
Eukaryota|Rep: 40S ribosomal protein S29 - Homo sapiens
(Human)
Length = 56
Score = 106 bits (255), Expect = 1e-21
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQC R+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>UniRef50_P90983 Cluster: Ribosomal protein, small subunit protein
29; n=18; Eukaryota|Rep: Ribosomal protein, small
subunit protein 29 - Caenorhabditis elegans
Length = 56
Score = 99 bits (238), Expect = 1e-19
Identities = 39/56 (69%), Positives = 47/56 (83%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
MG N+W+SHPR++G GSRSCR C+ HGLIRKYGL++CR+C RE A DIGFKKLD
Sbjct: 1 MGFQNLWFSHPRKFGPGSRSCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKKLD 56
>UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal
protein S29; n=4; Theria|Rep: PREDICTED: similar to
ribosomal protein S29 - Pan troglodytes
Length = 56
Score = 94.7 bits (225), Expect = 6e-18
Identities = 39/56 (69%), Positives = 46/56 (82%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
MGH +++SHP+++GQGSRSCR SNRHG IRKYGLN CRQC +YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPQKFGQGSRSCRVYSNRHGRIRKYGLNKCRQCFHQYAKDIGFIKLD 56
>UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4;
Eukaryota|Rep: 40S ribosomal protein S29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 56
Score = 93.1 bits (221), Expect = 2e-17
Identities = 37/54 (68%), Positives = 42/54 (77%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
MGH+N+W SHP++YG GSR CR C N HGLIRKYGLN CRQC R A +IGF K
Sbjct: 1 MGHSNVWNSHPKKYGPGSRLCRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54
>UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=2;
Fungi/Metazoa group|Rep: 40S ribosomal protein S29,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 86
Score = 89.4 bits (212), Expect = 2e-16
Identities = 35/55 (63%), Positives = 45/55 (81%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKL 788
M H ++WYS PR++G+GSR CR C++R GLIRKYG++ICRQC RE A DIGF K+
Sbjct: 1 MTHESVWYSRPRKFGKGSRECRVCAHRAGLIRKYGMDICRQCFREKAQDIGFYKV 55
>UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellular
organisms|Rep: 40S ribosomal protein S29 -
Schizosaccharomyces pombe (Fission yeast)
Length = 56
Score = 85.4 bits (202), Expect = 3e-15
Identities = 36/54 (66%), Positives = 41/54 (75%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
M H N+W+SHPR+YG+GSR C R GLIRKYGLNI RQ REYA+DIGF K
Sbjct: 1 MAHENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVK 54
>UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces
cerevisiae YLR388w YS29A ribosomal protein S29; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P41057
Saccharomyces cerevisiae YLR388w YS29A ribosomal protein
S29 - Yarrowia lipolytica (Candida lipolytica)
Length = 78
Score = 84.2 bits (199), Expect = 8e-15
Identities = 34/54 (62%), Positives = 41/54 (75%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
M H NIW+SHPR YG+G R CR +N++ +IRKYGLN+CRQ RE A DIGF K
Sbjct: 23 MAHENIWFSHPRHYGKGGRKCRITNNQNAVIRKYGLNLCRQSFREKAADIGFTK 76
>UniRef50_Q1DQB3 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Coccidioides
immitis
Length = 123
Score = 82.2 bits (194), Expect = 3e-14
Identities = 33/54 (61%), Positives = 42/54 (77%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
M H +++YS PR YG+GSR CR C+++ GLIRKYGL +CRQC RE + DIGF K
Sbjct: 1 MTHESVFYSRPRNYGKGSRQCRVCAHKAGLIRKYGLLVCRQCFREKSQDIGFVK 54
>UniRef50_Q18231 Cluster: Ribosomal protein, small subunit protein
30; n=3; Caenorhabditis|Rep: Ribosomal protein, small
subunit protein 30 - Caenorhabditis elegans
Length = 130
Score = 79.8 bits (188), Expect = 2e-13
Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 5/135 (3%)
Frame = +1
Query: 91 MQLHIRG--QSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL- 261
MQ+ + G +TH LDV+ ++ IK + EE ++S L + + E
Sbjct: 1 MQIFLLGLDNTTHTLDVDASTTLSAIKGVIGA-----GEEFSISYGSKVLSEELTLGECQ 55
Query: 262 --SSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVN 435
S + L + LLGGKVHGSLARAGKV+ QTP +QY RR+VN
Sbjct: 56 IESLSTLSVNGRLLGGKVHGSLARAGKVRAQTPKVDKQDKKKKKRGRAFRRVQYTRRYVN 115
Query: 436 VVQTFGRRRGPNSNS 480
V G++RGPNSNS
Sbjct: 116 VASGPGKKRGPNSNS 130
>UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila
melanogaster|Rep: CG8495-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 55
Score = 77.8 bits (183), Expect = 7e-13
Identities = 33/35 (94%), Positives = 34/35 (97%)
Frame = +3
Query: 687 RACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
RACSNRHGLIRKYGLNICRQC REYA+DIGFKKLD
Sbjct: 21 RACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 55
>UniRef50_P62861 Cluster: 40S ribosomal protein S30; n=74; root|Rep:
40S ribosomal protein S30 - Homo sapiens (Human)
Length = 59
Score = 72.9 bits (171), Expect = 2e-11
Identities = 34/59 (57%), Positives = 40/59 (67%)
Frame = +1
Query: 304 KVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 480
KVHGSLARAGKV+GQTP +QYNRRFVNVV TFG+++GPN+NS
Sbjct: 1 KVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVVPTFGKKKGPNANS 59
>UniRef50_UPI0000F33F66 Cluster: UPI0000F33F66 related cluster; n=3;
Laurasiatheria|Rep: UPI0000F33F66 UniRef100 entry - Bos
Taurus
Length = 128
Score = 71.3 bits (167), Expect = 6e-11
Identities = 49/132 (37%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Frame = +1
Query: 100 HIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDS-----CLVSELS 264
H + Q H L V GQE + IK + A +E ++ L + G PLED C V LS
Sbjct: 4 HAQSQELHTLKVTGQEMVAQIKAHV---ASLEGKDQVLLLAGTPLEDEVTLGQCEVEALS 60
Query: 265 STELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQ 444
+ L++ +LGGKVHGSL AGKV+GQTP YN FV VV
Sbjct: 61 T--LEVVGRMLGGKVHGSLDCAGKVRGQTP--KVDKESKRRWGQAKRGTYYNPCFVKVVP 116
Query: 445 TFGRRRGPNSNS 480
+++G N +S
Sbjct: 117 HLKKKKGTNVSS 128
>UniRef50_Q9W6Y0 Cluster: 40S ribosomal protein S30; n=30;
Eukaryota|Rep: 40S ribosomal protein S30 - Oryzias
latipes (Medaka fish) (Japanese ricefish)
Length = 59
Score = 70.9 bits (166), Expect = 8e-11
Identities = 34/59 (57%), Positives = 39/59 (66%)
Frame = +1
Query: 304 KVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 480
KVHGSLARAGKV+GQTP IQYNRRFVNVV TFG+++G N+NS
Sbjct: 1 KVHGSLARAGKVRGQTPNVDKHEEKEEEDGRAKRRIQYNRRFVNVVPTFGKKKGANANS 59
>UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7;
Methanococcales|Rep: 30S ribosomal protein S14P -
Methanococcus jannaschii
Length = 53
Score = 67.7 bits (158), Expect = 7e-10
Identities = 29/46 (63%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Frame = +3
Query: 657 RRYGQGSRSCRACSN-RHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
++YG G R C+ C + GLIRKYGLN+CRQC RE AH +GFKKLD
Sbjct: 8 KKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD 53
>UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5;
Trypanosomatidae|Rep: Ribosomal protein s29, putative -
Leishmania major
Length = 57
Score = 66.9 bits (156), Expect = 1e-09
Identities = 31/56 (55%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Frame = +3
Query: 624 MGHANIWYSHPR-RYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKL 788
MGH + W S + G+G+R C CSN+ LIRKY LN+CRQC RE A IGF KL
Sbjct: 1 MGHLDQWRSRQKIGMGKGARCCVICSNQKALIRKYELNVCRQCFRENAEHIGFTKL 56
>UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal
protein S29; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein S29 -
Ornithorhynchus anatinus
Length = 168
Score = 65.7 bits (153), Expect = 3e-09
Identities = 27/33 (81%), Positives = 29/33 (87%)
Frame = +3
Query: 687 RACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
R CSNRHGLIRKYGLN+CRQC R+YA DIGF K
Sbjct: 85 RVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 117
>UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 239
Score = 65.3 bits (152), Expect = 4e-09
Identities = 26/50 (52%), Positives = 33/50 (66%)
Frame = +3
Query: 639 IWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKL 788
+W +HPR YG+ S+ CR C R GLI KY + CR+C RE A IGF K+
Sbjct: 5 LWRTHPRNYGKDSKECRVCGARQGLITKYEMMTCRRCFREQAPHIGFVKV 54
>UniRef50_P49689 Cluster: 40S ribosomal protein S30; n=4;
Magnoliophyta|Rep: 40S ribosomal protein S30 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 62
Score = 65.3 bits (152), Expect = 4e-09
Identities = 31/59 (52%), Positives = 37/59 (62%)
Frame = +1
Query: 301 GKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSN 477
GKVHGSLARAGKV+GQTP +Q+NRRFV V FG++RGPNS+
Sbjct: 2 GKVHGSLARAGKVRGQTPKVAKQDKKKKPRGRAHKRLQHNRRFVTAVVGFGKKRGPNSS 60
>UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellular
organisms|Rep: 30S ribosomal protein S14P -
Archaeoglobus fulgidus
Length = 51
Score = 62.1 bits (144), Expect = 4e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Frame = +3
Query: 663 YGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
+G+G+ CR C R GLIR YGL +CRQC RE A ++GFKK
Sbjct: 9 FGRGANECRRCGRRRGLIRMYGLYLCRQCFREVASELGFKK 49
>UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11;
Thermoprotei|Rep: 30S ribosomal protein S14P -
Sulfolobus acidocaldarius
Length = 54
Score = 58.8 bits (136), Expect = 3e-07
Identities = 22/43 (51%), Positives = 33/43 (76%)
Frame = +3
Query: 657 RRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
RR+G+G + C+ C +R +I+KYGL +CRQC RE A+ +GF+K
Sbjct: 10 RRFGKGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRK 52
>UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n=1;
Ostreococcus tauri|Rep: RS29_CULQU 40S ribosomal protein
S29 - Ostreococcus tauri
Length = 157
Score = 58.0 bits (134), Expect = 6e-07
Identities = 24/36 (66%), Positives = 27/36 (75%)
Frame = +3
Query: 678 RSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
R R C N+ +IRKY LNICRQC REYA DIGF+K
Sbjct: 120 RRSRVCENQWAIIRKYNLNICRQCFREYAKDIGFQK 155
Score = 37.5 bits (83), Expect = 0.90
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +3
Query: 621 IMGHANIWYSHPRRYGQGSR 680
+MGH+++W SHP YG+GSR
Sbjct: 22 VMGHSDVWASHPANYGKGSR 41
>UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2;
Archaea|Rep: 30S ribosomal protein S14P - Nanoarchaeum
equitans
Length = 69
Score = 57.6 bits (133), Expect = 8e-07
Identities = 20/43 (46%), Positives = 31/43 (72%)
Frame = +3
Query: 657 RRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
R++G+G+R C C G+IR+YGL +C+ C +E AH++GF K
Sbjct: 24 RKFGKGARRCERCGRYDGIIRRYGLYLCKDCFKEVAHELGFFK 66
>UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S29
- Encephalitozoon cuniculi
Length = 55
Score = 56.0 bits (129), Expect = 2e-06
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +3
Query: 645 YSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
+SH + +G+GSRSC +C G+IRK L +CR+C REYA DIGF D
Sbjct: 9 HSHRKPFGKGSRSCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIYD 55
>UniRef50_A1DL63 Cluster: Ribosomal S30/ubiquitin fusion; n=2;
Trichocomaceae|Rep: Ribosomal S30/ubiquitin fusion -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 78
Score = 52.4 bits (120), Expect = 3e-05
Identities = 26/54 (48%), Positives = 30/54 (55%)
Frame = +1
Query: 301 GKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRR 462
GKVHGSLARAGKVK TP ++Y RRFVNV T G+R+
Sbjct: 2 GKVHGSLARAGKVKSATPKVEKQEKKKEPKGRALKRLKYTRRFVNVTMTGGKRK 55
>UniRef50_O42952 Cluster: 40S ribosomal protein S30; n=37;
Eukaryota|Rep: 40S ribosomal protein S30 -
Schizosaccharomyces pombe (Fission yeast)
Length = 61
Score = 51.6 bits (118), Expect = 5e-05
Identities = 28/60 (46%), Positives = 31/60 (51%)
Frame = +1
Query: 301 GKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFGRRRGPNSNS 480
GKVHGSLARAGKVK QTP + Y RRFVNV G +R N +S
Sbjct: 2 GKVHGSLARAGKVKSQTPKVEKQEKPKQPKGRAYKRLLYVRRFVNVTNMVGGKRRMNPSS 61
>UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12;
Archaea|Rep: 30S ribosomal protein S14P - Thermoplasma
volcanium
Length = 53
Score = 51.6 bits (118), Expect = 5e-05
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 657 RRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
++YG C C + G++RKYGL++CRQC RE A +GF+K
Sbjct: 10 KKYGHID-GCVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEK 51
>UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10;
Archaea|Rep: 30S ribosomal protein S14P - Pyrococcus
abyssi
Length = 56
Score = 51.2 bits (117), Expect = 7e-05
Identities = 20/46 (43%), Positives = 30/46 (65%)
Frame = +3
Query: 654 PRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
PR++G+G+R C C +IR +GL +CR C RE A +GF+K +
Sbjct: 11 PRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKYE 56
>UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_44835_45248 - Giardia lamblia
ATCC 50803
Length = 137
Score = 49.2 bits (112), Expect = 3e-04
Identities = 21/37 (56%), Positives = 25/37 (67%)
Frame = +3
Query: 678 RSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKL 788
R CR C N + + RKYGL ICR+C +E A IGF KL
Sbjct: 100 RECRICGNYNSVYRKYGLFICRRCFKENAGKIGFVKL 136
>UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S14P -
Halobacterium salinarium (Halobacterium halobium)
Length = 52
Score = 47.6 bits (108), Expect = 8e-04
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 675 SRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
+ CR C GL+ KY + +CRQC RE A +GFKK
Sbjct: 14 THECRRCGREQGLVGKYDIWLCRQCFREIARSMGFKK 50
>UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 46.0 bits (104), Expect = 0.003
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSN 701
MGH+N+W SHP+ YG GSR C CS+
Sbjct: 1 MGHSNVWNSHPKNYGPGSRVCFVCSS 26
>UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S14P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 61
Score = 44.8 bits (101), Expect = 0.006
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +3
Query: 660 RYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKK 785
R GQ SC+ C GL+ KY + +CRQC RE + +GF+K
Sbjct: 19 RTGQ-LESCQRCGREQGLVGKYDIWLCRQCFREISRGMGFRK 59
>UniRef50_Q4Q7P0 Cluster: 40S ribosomal protein S30, putative; n=4;
Leishmania|Rep: 40S ribosomal protein S30, putative -
Leishmania major
Length = 66
Score = 42.7 bits (96), Expect = 0.024
Identities = 20/45 (44%), Positives = 25/45 (55%)
Frame = +1
Query: 301 GKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVN 435
GK+HGSLARAGKVK QTP ++Y RRF++
Sbjct: 2 GKIHGSLARAGKVKNQTPKVAKQEKPKQPRGRALKRLKYTRRFLS 46
>UniRef50_UPI00005A3817 Cluster: PREDICTED: similar to
UBIQUITIN-LIKE PROTEIN FUBI; n=1; Canis lupus
familiaris|Rep: PREDICTED: similar to UBIQUITIN-LIKE
PROTEIN FUBI - Canis familiaris
Length = 166
Score = 40.3 bits (90), Expect = 0.13
Identities = 23/91 (25%), Positives = 43/91 (47%), Gaps = 3/91 (3%)
Frame = +1
Query: 91 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--- 261
+QL +R H L+V G E+ IK + L +E+ + + G+PL ++ +
Sbjct: 17 VQLLVRAWELHTLEVTGLEAFAHIKTHVASLEGHTTEDKVVLLAGSPLPGEAILGQCGVE 76
Query: 262 SSTELDLTVPLLGGKVHGSLARAGKVKGQTP 354
+ L++ +LGG G+ R G ++ P
Sbjct: 77 ALATLEMVGRMLGGSGGGARMRTGALRQPPP 107
>UniRef50_UPI0000EB013B Cluster: UPI0000EB013B related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB013B UniRef100
entry - Canis familiaris
Length = 109
Score = 40.3 bits (90), Expect = 0.13
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +1
Query: 91 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLED-----SCLVS 255
MQL + Q H L+V GQE++ IK + L + E+ + + G L D C
Sbjct: 1 MQLFVWTQELHTLEVTGQETVTQIKTYVASLESIAPEDQVMLLAGMTLMDGATLGQCGAE 60
Query: 256 ELSSTELDLTV--PLLGGKVHGSLARAGKVK 342
LS+ E+ +LGG+ H LA GK +
Sbjct: 61 ALSTLEVACCTFGDMLGGEEH--LACVGKAR 89
>UniRef50_UPI000023DF20 Cluster: hypothetical protein FG07181.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07181.1 - Gibberella zeae PH-1
Length = 59
Score = 37.5 bits (83), Expect = 0.90
Identities = 13/21 (61%), Positives = 16/21 (76%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSC 686
M H ++W S PR YG+GSRSC
Sbjct: 1 MSHESVWNSRPRNYGKGSRSC 21
>UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Clostridium perfringens
Length = 61
Score = 36.7 bits (81), Expect = 1.6
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = +3
Query: 642 WYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAH 767
W P+ + CR C H +++K+G ICR C RE A+
Sbjct: 10 WKKEPKYKTRAYTRCRLCGRPHSVLKKFG--ICRICFRELAY 49
>UniRef50_Q5D8K9 Cluster: SJCHGC02785 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC02785 protein - Schistosoma
japonicum (Blood fluke)
Length = 153
Score = 35.5 bits (78), Expect = 3.6
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Frame = +1
Query: 82 RYKMQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL 261
R ++ H+ G V+ ES+ +K+++ + + + +L G PL DS L+ EL
Sbjct: 2 RLLVRSHLGGSI--VVSAGPNESVKSLKDKISVATGIHASTQSLYHHGLPLLDSSLLEEL 59
Query: 262 SSTEL---DLTVPLLGG 303
T+L D+ LLGG
Sbjct: 60 DFTDLDNVDVNCELLGG 76
>UniRef50_A0CN43 Cluster: Chromosome undetermined scaffold_22, whole
genome shotgun sequence; n=6; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_22,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 92
Score = 34.3 bits (75), Expect = 8.4
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Frame = +1
Query: 301 GKVHGSLARAGKVKGQTP-XXXXXXXXXXXXXXXXXXIQYNRRFVNVVQTFG----RRRG 465
GK+HG+LA+AGKV+ QTP I +NRRF + +R+G
Sbjct: 2 GKLHGTLAKAGKVRKQTPKIEKQVRRHKIPKGRAYKRICFNRRFGSAAAAGAGPQQKRKG 61
Query: 466 PN 471
PN
Sbjct: 62 PN 63
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,100,139,218
Number of Sequences: 1657284
Number of extensions: 19018809
Number of successful extensions: 40876
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 39169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40854
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 159698672100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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