Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_D10_e364_08.seq
         (1502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosoma...   111   7e-26
DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.       25   7.5  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           24   9.9  

>AJ439060-15|CAD27766.1|   56|Anopheles gambiae putative ribosomal
           protein protein.
          Length = 56

 Score =  111 bits (266), Expect = 7e-26
 Identities = 46/56 (82%), Positives = 50/56 (89%)
 Frame = +3

Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
           MG AN+WYSHPR+YGQGSR  RACSN HG+IRKYGLNICRQC REYA DIGF+KLD
Sbjct: 1   MGFANLWYSHPRKYGQGSRFWRACSNNHGMIRKYGLNICRQCFREYAKDIGFRKLD 56


>DQ974173-1|ABJ52813.1|  553|Anopheles gambiae serpin 16 protein.
          Length = 553

 Score = 24.6 bits (51), Expect = 7.5
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -1

Query: 314 PCTLPPRRGTVRSSSVDESSDTRHESSRGA 225
           P +   RRGT  S++++ ++  + E +RGA
Sbjct: 454 PSSTDIRRGTSNSNNINAATGQQQEPARGA 483


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 280 GRAQLMKALTQDMSPQGAHRT*TESPPHSQHQQE 179
           G+AQ  ++  Q   PQ   +   +  P SQ QQ+
Sbjct: 398 GQAQPSQSAAQQYQPQQQQQQQQQQQPQSQQQQQ 431


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,158,328
Number of Sequences: 2352
Number of extensions: 21659
Number of successful extensions: 26
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 175969035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)