Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_D10_e364_08.seq
(1502 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X65923-1|CAA46716.1| 133|Homo sapiens fau protein. 120 2e-26
X65921-1|CAA46714.1| 133|Homo sapiens fau 1 protein. 120 2e-26
CR541974-1|CAG46772.1| 133|Homo sapiens FAU protein. 120 2e-26
BC033877-1|AAH33877.1| 133|Homo sapiens Finkel-Biskis-Reilly mu... 120 2e-26
AY398663-1|AAQ87877.1| 133|Homo sapiens Finkel-Biskis-Reilly mu... 120 2e-26
AK026639-1|BAB15515.1| 133|Homo sapiens protein ( Homo sapiens ... 120 2e-26
U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29 pro... 106 2e-22
L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens (c... 106 2e-22
BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29 p... 106 2e-22
BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29 p... 106 2e-22
AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29 p... 106 2e-22
AB007165-1|BAA25827.1| 26|Homo sapiens ribosomal protein S29 p... 51 1e-05
X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein. 37 0.22
AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein. 33 2.7
AK126220-1|BAC86492.1| 122|Homo sapiens protein. 33 2.7
>X65923-1|CAA46716.1| 133|Homo sapiens fau protein.
Length = 133
Score = 120 bits (288), Expect = 2e-26
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +1
Query: 91 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--- 261
MQL +R Q H +V GQE++ IK + L + E+ + + GAPLED + +
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 262 SSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVV 441
+ T L++ +LGGKVHGSLARAGKV+GQTP +QYNRRFVNVV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120
Query: 442 QTFGRRRGPNSNS 480
TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133
>X65921-1|CAA46714.1| 133|Homo sapiens fau 1 protein.
Length = 133
Score = 120 bits (288), Expect = 2e-26
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +1
Query: 91 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--- 261
MQL +R Q H +V GQE++ IK + L + E+ + + GAPLED + +
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 262 SSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVV 441
+ T L++ +LGGKVHGSLARAGKV+GQTP +QYNRRFVNVV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120
Query: 442 QTFGRRRGPNSNS 480
TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133
>CR541974-1|CAG46772.1| 133|Homo sapiens FAU protein.
Length = 133
Score = 120 bits (288), Expect = 2e-26
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +1
Query: 91 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--- 261
MQL +R Q H +V GQE++ IK + L + E+ + + GAPLED + +
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 262 SSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVV 441
+ T L++ +LGGKVHGSLARAGKV+GQTP +QYNRRFVNVV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120
Query: 442 QTFGRRRGPNSNS 480
TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133
>BC033877-1|AAH33877.1| 133|Homo sapiens Finkel-Biskis-Reilly
murine sarcoma virus (FBR-MuSV) ubiquitously expressed
protein.
Length = 133
Score = 120 bits (288), Expect = 2e-26
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +1
Query: 91 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--- 261
MQL +R Q H +V GQE++ IK + L + E+ + + GAPLED + +
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 262 SSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVV 441
+ T L++ +LGGKVHGSLARAGKV+GQTP +QYNRRFVNVV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120
Query: 442 QTFGRRRGPNSNS 480
TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133
>AY398663-1|AAQ87877.1| 133|Homo sapiens Finkel-Biskis-Reilly
murine sarcoma virus (FBR-MuSV) ubiquitously expressed
(fo protein.
Length = 133
Score = 120 bits (288), Expect = 2e-26
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +1
Query: 91 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--- 261
MQL +R Q H +V GQE++ IK + L + E+ + + GAPLED + +
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 262 SSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVV 441
+ T L++ +LGGKVHGSLARAGKV+GQTP +QYNRRFVNVV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120
Query: 442 QTFGRRRGPNSNS 480
TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133
>AK026639-1|BAB15515.1| 133|Homo sapiens protein ( Homo sapiens
cDNA: FLJ22986 fis, clone KAT11742. ).
Length = 133
Score = 120 bits (288), Expect = 2e-26
Identities = 59/133 (44%), Positives = 80/133 (60%), Gaps = 3/133 (2%)
Frame = +1
Query: 91 MQLHIRGQSTHVLDVNGQESIGDIKNRLRLLADVESEEVTLSMCGAPLEDSCLVSEL--- 261
MQL +R Q H +V GQE++ IK + L + E+ + + GAPLED + +
Sbjct: 1 MQLFVRAQELHTFEVTGQETVAQIKAHVASLEGIAPEDQVVLLAGAPLEDEATLGQCGVE 60
Query: 262 SSTELDLTVPLLGGKVHGSLARAGKVKGQTPXXXXXXXXXXXXXXXXXXIQYNRRFVNVV 441
+ T L++ +LGGKVHGSLARAGKV+GQTP +QYNRRFVNVV
Sbjct: 61 ALTTLEVAGRMLGGKVHGSLARAGKVRGQTPKVAKQEKKKKKTGRAKRRMQYNRRFVNVV 120
Query: 442 QTFGRRRGPNSNS 480
TFG+++GPN+NS
Sbjct: 121 PTFGKKKGPNANS 133
>U14973-1|AAA85661.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 106 bits (255), Expect = 2e-22
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQC R+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>L31610-1|AAB27426.1| 56|Homo sapiens protein ( Homo sapiens
(clone cori-1cl5) S29 ribosomal protein mRNA, complete
cds. ).
Length = 56
Score = 106 bits (255), Expect = 2e-22
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQC R+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>BC035313-1|AAH35313.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 106 bits (255), Expect = 2e-22
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQC R+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>BC032813-1|AAH32813.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 106 bits (255), Expect = 2e-22
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQC R+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>AB061847-1|BAB79485.1| 56|Homo sapiens ribosomal protein S29
protein.
Length = 56
Score = 106 bits (255), Expect = 2e-22
Identities = 43/56 (76%), Positives = 50/56 (89%)
Frame = +3
Query: 624 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCXREYAHDIGFKKLD 791
MGH +++SHPR++GQGSRSCR CSNRHGLIRKYGLN+CRQC R+YA DIGF KLD
Sbjct: 1 MGHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
>AB007165-1|BAA25827.1| 26|Homo sapiens ribosomal protein S29
protein.
Length = 26
Score = 50.8 bits (116), Expect = 1e-05
Identities = 21/26 (80%), Positives = 23/26 (88%)
Frame = +3
Query: 708 GLIRKYGLNICRQCXREYAHDIGFKK 785
GLIRKYGLN+CRQC R+YA DIGF K
Sbjct: 1 GLIRKYGLNMCRQCFRQYAKDIGFIK 26
>X75315-1|CAA53064.1| 230|Homo sapiens SEB4B protein.
Length = 230
Score = 36.7 bits (81), Expect = 0.22
Identities = 14/19 (73%), Positives = 18/19 (94%)
Frame = +1
Query: 409 IQYNRRFVNVVQTFGRRRG 465
+QYNRRFVNVV TFG+++G
Sbjct: 3 MQYNRRFVNVVPTFGKKKG 21
>AY204751-1|AAP13576.1| 5058|Homo sapiens ABC A13 protein.
Length = 5058
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -1
Query: 413 WILRLARPVLF---FFFCC--FSTLGVWPLTLPARARDPCTLPPR 294
W+ RL PVLF FF+ C F L V P R RD C L PR
Sbjct: 16 WLCRLRNPVLFLAEFFWPCILFVILTVLRFQEPPRYRDICYLQPR 60
>AK126220-1|BAC86492.1| 122|Homo sapiens protein.
Length = 122
Score = 33.1 bits (72), Expect = 2.7
Identities = 21/45 (46%), Positives = 23/45 (51%), Gaps = 5/45 (11%)
Frame = -1
Query: 413 WILRLARPVLF---FFFCC--FSTLGVWPLTLPARARDPCTLPPR 294
W+ RL PVLF FF+ C F L V P R RD C L PR
Sbjct: 16 WLCRLRNPVLFLAEFFWPCILFVILTVLRFQEPPRYRDICYLQPR 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,428,820
Number of Sequences: 237096
Number of extensions: 3375903
Number of successful extensions: 21418
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21412
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 22307317538
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -