Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_D09_e356_07.seq
(1490 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 38 0.014
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 38 0.014
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 38 0.014
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.23
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.23
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.23
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 34 0.30
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.52
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.52
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 33 0.69
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 33 0.69
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 32 0.91
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 32 0.91
Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical pr... 32 0.91
Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical pr... 32 1.2
U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical pr... 32 1.2
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 32 1.2
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 31 1.6
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 31 1.6
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 31 2.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 31 2.1
Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical pr... 31 2.8
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 31 2.8
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 31 2.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.7
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 3.7
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 30 3.7
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 30 3.7
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 30 3.7
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.4
Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical p... 29 8.5
Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical pr... 29 8.5
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr... 29 8.5
X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein. 29 8.5
X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein. 29 8.5
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 29 8.5
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 38.3 bits (85), Expect = 0.014
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +2
Query: 1343 PXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXPXP 1489
P + GG P T GPPP P G PPPPG PP P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG--GLPPITGGP 742
Score = 36.3 bits (80), Expect = 0.056
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 1337 PXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXPXP 1489
P P GG P PPP G P G PPPP PP P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.9 bits (64), Expect = 4.9
Identities = 27/109 (24%), Positives = 28/109 (25%), Gaps = 3/109 (2%)
Frame = +2
Query: 1166 KKKPXGPXXPLGGGHXXGVPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXP-- 1339
K P GG G P P PP PG P P
Sbjct: 690 KMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Query: 1340 -XPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXP 1483
P + G P P PPP P PPPP P P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 6.4
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Frame = +2
Query: 1379 PXTXGPPPL---GXXRPXXXGXXXPPPPG----XAXXPPXXPXP 1489
P T GPPP G P G PPPPG + PP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 38.3 bits (85), Expect = 0.014
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +2
Query: 1343 PXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXPXP 1489
P + GG P T GPPP P G PPPPG PP P
Sbjct: 696 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG--GLPPITGGP 742
Score = 36.3 bits (80), Expect = 0.056
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 1337 PXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXPXP 1489
P P GG P PPP G P G PPPP PP P P
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 776
Score = 29.9 bits (64), Expect = 4.9
Identities = 27/109 (24%), Positives = 28/109 (25%), Gaps = 3/109 (2%)
Frame = +2
Query: 1166 KKKPXGPXXPLGGGHXXGVPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXP-- 1339
K P GG G P P PP PG P P
Sbjct: 690 KMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Query: 1340 -XPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXP 1483
P + G P P PPP P PPPP P P
Sbjct: 750 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 798
Score = 29.5 bits (63), Expect = 6.4
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Frame = +2
Query: 1379 PXTXGPPPL---GXXRPXXXGXXXPPPPG----XAXXPPXXPXP 1489
P T GPPP G P G PPPPG + PP P P
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 764
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 38.3 bits (85), Expect = 0.014
Identities = 19/49 (38%), Positives = 20/49 (40%)
Frame = +2
Query: 1343 PXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXPXP 1489
P + GG P T GPPP P G PPPPG PP P
Sbjct: 279 PSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPG--GLPPITGGP 325
Score = 36.3 bits (80), Expect = 0.056
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = +2
Query: 1337 PXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXPXP 1489
P P GG P PPP G P G PPPP PP P P
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPP 359
Score = 29.9 bits (64), Expect = 4.9
Identities = 27/109 (24%), Positives = 28/109 (25%), Gaps = 3/109 (2%)
Frame = +2
Query: 1166 KKKPXGPXXPLGGGHXXGVPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXP-- 1339
K P GG G P P PP PG P P
Sbjct: 273 KMNLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
Query: 1340 -XPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXP 1483
P + G P P PPP P PPPP P P
Sbjct: 333 GLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPPGMFAPMAP 381
Score = 29.5 bits (63), Expect = 6.4
Identities = 18/44 (40%), Positives = 19/44 (43%), Gaps = 7/44 (15%)
Frame = +2
Query: 1379 PXTXGPPPL---GXXRPXXXGXXXPPPPG----XAXXPPXXPXP 1489
P T GPPP G P G PPPPG + PP P P
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPP 347
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 34.3 bits (75), Expect = 0.23
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 3/87 (3%)
Frame = +2
Query: 1223 PXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXPX---PXXAXGGXXPXXPXTXG 1393
P G+G P P PP G P P P G P P G
Sbjct: 248 PLAGSGSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 305
Query: 1394 PPPLGXXRPXXXGXXXPPPPGXAXXPP 1474
PP G P G PPP G PP
Sbjct: 306 SPPTGSLPPPQAG-GSPPPAGTGSPPP 331
Score = 33.9 bits (74), Expect = 0.30
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 1283 PPAPGXXXRFXXXXPXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXA 1462
PP P P P A G P + PPP G P G PPP +
Sbjct: 237 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 296
Query: 1463 XXPPXXP 1483
PP P
Sbjct: 297 PPPPPPP 303
Score = 31.5 bits (68), Expect = 1.6
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Frame = +2
Query: 1277 PXPPAPGXXXRFXXXXPXXXPX----PXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXP 1444
P PP G P P P G P + PPP G P P
Sbjct: 239 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 298
Query: 1445 PPPGXAXXPPXXPXP 1489
PPP PP P
Sbjct: 299 PPPPPRGSPPTGSLP 313
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 1325 PXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPP 1474
P P P G P PPP P PPPP PP
Sbjct: 233 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 282
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 34.3 bits (75), Expect = 0.23
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 3/87 (3%)
Frame = +2
Query: 1223 PXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXPX---PXXAXGGXXPXXPXTXG 1393
P G+G P P PP G P P P G P P G
Sbjct: 269 PLAGSGSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 326
Query: 1394 PPPLGXXRPXXXGXXXPPPPGXAXXPP 1474
PP G P G PPP G PP
Sbjct: 327 SPPTGSLPPPQAG-GSPPPAGTGSPPP 352
Score = 33.9 bits (74), Expect = 0.30
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 1283 PPAPGXXXRFXXXXPXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXA 1462
PP P P P A G P + PPP G P G PPP +
Sbjct: 258 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 317
Query: 1463 XXPPXXP 1483
PP P
Sbjct: 318 PPPPPPP 324
Score = 31.5 bits (68), Expect = 1.6
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Frame = +2
Query: 1277 PXPPAPGXXXRFXXXXPXXXPX----PXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXP 1444
P PP G P P P G P + PPP G P P
Sbjct: 260 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 319
Query: 1445 PPPGXAXXPPXXPXP 1489
PPP PP P
Sbjct: 320 PPPPPRGSPPTGSLP 334
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 1325 PXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPP 1474
P P P G P PPP P PPPP PP
Sbjct: 254 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 303
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 34.3 bits (75), Expect = 0.23
Identities = 26/87 (29%), Positives = 27/87 (31%), Gaps = 3/87 (3%)
Frame = +2
Query: 1223 PXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXPX---PXXAXGGXXPXXPXTXG 1393
P G+G P P PP G P P P G P P G
Sbjct: 254 PLAGSGSPPPPPAAGS--PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRG 311
Query: 1394 PPPLGXXRPXXXGXXXPPPPGXAXXPP 1474
PP G P G PPP G PP
Sbjct: 312 SPPTGSLPPPQAG-GSPPPAGTGSPPP 337
Score = 33.9 bits (74), Expect = 0.30
Identities = 20/67 (29%), Positives = 22/67 (32%)
Frame = +2
Query: 1283 PPAPGXXXRFXXXXPXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXA 1462
PP P P P A G P + PPP G P G PPP +
Sbjct: 243 PPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGS 302
Query: 1463 XXPPXXP 1483
PP P
Sbjct: 303 PPPPPPP 309
Score = 31.5 bits (68), Expect = 1.6
Identities = 21/75 (28%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Frame = +2
Query: 1277 PXPPAPGXXXRFXXXXPXXXPX----PXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXP 1444
P PP G P P P G P + PPP G P P
Sbjct: 245 PPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPP 304
Query: 1445 PPPGXAXXPPXXPXP 1489
PPP PP P
Sbjct: 305 PPPPPRGSPPTGSLP 319
Score = 30.3 bits (65), Expect = 3.7
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +2
Query: 1325 PXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPP 1474
P P P G P PPP P PPPP PP
Sbjct: 239 PAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPP 288
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical protein
F12F6.6 protein.
Length = 1126
Score = 33.9 bits (74), Expect = 0.30
Identities = 25/89 (28%), Positives = 28/89 (31%), Gaps = 2/89 (2%)
Frame = +3
Query: 1212 PXXSPGXEPGXPTXXPXPXXXAXXXXXXXXXXDXXGXXPXXXRPLXXPXGAXSPXGPGXX 1391
P + G PG PT P D P P GA +P PG
Sbjct: 226 PPGTGGFPPGQPTAGSFPPGPQVPGSYPSGPADIP---QGPGMPRAFPPGASAPVAPGMP 282
Query: 1392 A--PPXWGXXGLXXXXXPXXPPPGXPXPP 1472
PP G G+ P P PG P P
Sbjct: 283 GAFPPGQGGPGMPGSFPPGAPGPGGPGMP 311
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 33.1 bits (72), Expect = 0.52
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Frame = +2
Query: 1277 PXPPAPGXXXR-----FXXXXPXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXX 1441
P PP PG R P P P G P P PPP P G
Sbjct: 276 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP-PGMPGMPPPPPPSRFGPPGMGGMP 334
Query: 1442 PPPPGXAXXPPXXPXP 1489
PPPP P P P
Sbjct: 335 PPPPPGMRYPGGMPPP 350
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 33.1 bits (72), Expect = 0.52
Identities = 24/76 (31%), Positives = 24/76 (31%), Gaps = 5/76 (6%)
Frame = +2
Query: 1277 PXPPAPGXXXR-----FXXXXPXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXX 1441
P PP PG R P P P G P P PPP P G
Sbjct: 286 PMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGP-PGMPGMPPPPPPSRFGPPGMGGMP 344
Query: 1442 PPPPGXAXXPPXXPXP 1489
PPPP P P P
Sbjct: 345 PPPPPGMRYPGGMPPP 360
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 32.7 bits (71), Expect = 0.69
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = +2
Query: 1337 PXPXXAXGGXXPXX-PXTXGPPPLGXXRPXXXGXXXPPPP---GXAXXPPXXPXP 1489
P P G P P PPP G P G PPPP G PP P P
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 32.7 bits (71), Expect = 0.69
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Frame = +2
Query: 1337 PXPXXAXGGXXPXX-PXTXGPPPLGXXRPXXXGXXXPPPP---GXAXXPPXXPXP 1489
P P G P P PPP G P G PPPP G PP P P
Sbjct: 270 PPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPPPFMPPP 324
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical protein
Y49E10.10 protein.
Length = 425
Score = 32.3 bits (70), Expect = 0.91
Identities = 24/95 (25%), Positives = 25/95 (26%), Gaps = 4/95 (4%)
Frame = +2
Query: 1202 GGHXXGVPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXX---PXXXP-XPXXAXGGXX 1369
GG G P G P P P P + P P P
Sbjct: 108 GGDPAGKPNPPAGDPSKTKPQGGD-PAKPKPQTGDPYATNSTVKPATAPVTPEPTVKNTT 166
Query: 1370 PXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPP 1474
P T PPP P PPPP PP
Sbjct: 167 AAEPTTEAPPPPTTKAPPPPTTKAPPPPTTKAPPP 201
Score = 29.9 bits (64), Expect = 4.9
Identities = 21/87 (24%), Positives = 21/87 (24%)
Frame = +2
Query: 1193 PLGGGHXXGVPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXPXPXXAXGGXXP 1372
P GG P G P P P P P P
Sbjct: 127 PQGGDPAKPKPQTGDPYATNSTVKPATAPVTPEPTVKNTTAAEPTTEAPPPPTTKA---P 183
Query: 1373 XXPXTXGPPPLGXXRPXXXGXXXPPPP 1453
P T PPP P PPPP
Sbjct: 184 PPPTTKAPPPPTTKAPPPPTTKAPPPP 210
Score = 29.5 bits (63), Expect = 6.4
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +2
Query: 1370 PXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPP 1474
P P T PPP P PPPP PP
Sbjct: 175 PPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPP 209
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical protein
F15B9.4 protein.
Length = 1140
Score = 32.3 bits (70), Expect = 0.91
Identities = 22/72 (30%), Positives = 23/72 (31%), Gaps = 1/72 (1%)
Frame = +2
Query: 1277 PXPPAPGXXXRFXXXXPXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPP-P 1453
P PP P P P + G P P PPPL P PPP P
Sbjct: 470 PPPPGPPSSLLPLINTNAPPPPPMPSINGHAPNPPP---PPPLLGIAPMSTNAPPPPPMP 526
Query: 1454 GXAXXPPXXPXP 1489
G A P P
Sbjct: 527 GMAPLSTGAPTP 538
Score = 31.5 bits (68), Expect = 1.6
Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 3/54 (5%)
Frame = +2
Query: 1337 PXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPP---GXAXXPPXXPXP 1489
P P G P PPP+ P G PPPP G A P P P
Sbjct: 503 PPPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPP 556
>Z70208-2|CAA94136.1| 304|Caenorhabditis elegans Hypothetical protein
F54B11.2 protein.
Length = 304
Score = 32.3 bits (70), Expect = 0.91
Identities = 27/93 (29%), Positives = 27/93 (29%), Gaps = 1/93 (1%)
Frame = +2
Query: 1175 PXGPXXPLGGGHXXGVPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXPXPXXA 1354
P GP P G G P G P P P APG P P P A
Sbjct: 191 PSGPAGPAGNDGAAGTP--GPDGP----AGESTYPEPAAPGPA---GPPGPAGPPGPDGA 241
Query: 1355 XGGXXPXXPXTXGPP-PLGXXRPXXXGXXXPPP 1450
P GPP P G P PP
Sbjct: 242 SPTAAPGAAGPPGPPGPAGAPGPDGNPGTAGPP 274
>Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical
protein C08B6.2 protein.
Length = 430
Score = 31.9 bits (69), Expect = 1.2
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = -2
Query: 229 IVNFISSTLYRVYNLFLIYNNFKYFYHLI*LTINYNYKINKYRIPIRS 86
I+ + + V +LF Y+N KYF++ I + +++ +N +I + +
Sbjct: 378 IITLLDQENFFVLHLFCFYHNIKYFFYYIIFMLLFSFNLNYNQINLEN 425
>U41557-2|AAA83301.1| 309|Caenorhabditis elegans Hypothetical protein
C50F7.5 protein.
Length = 309
Score = 31.9 bits (69), Expect = 1.2
Identities = 30/115 (26%), Positives = 33/115 (28%), Gaps = 5/115 (4%)
Frame = +2
Query: 1154 ENXEKKKPXGPXXPLGGGHXXGVPXXGTGXPXXXXXXXXXXPX-PPAPGXXXRFXXXXPX 1330
E E +P GP P G+ P P PP+PG P
Sbjct: 165 EPSEDPQPSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPSGPPSPGPVDPSEDPKPS 224
Query: 1331 XXPXPXXAXGGXXPXXPXTXGPP-PLGXXRPXXXGXXXPP---PPGXAXXPPXXP 1483
P P P GPP P G G PP PPG P P
Sbjct: 225 EPPSPGPVDPSDEPSPSDPPGPPGPPGPPTRRPPGPPGPPTRRPPGPPGPPTRRP 279
Score = 31.5 bits (68), Expect = 1.6
Identities = 35/153 (22%), Positives = 37/153 (24%), Gaps = 5/153 (3%)
Frame = +2
Query: 1046 PXPGRXXPGGRXKXLGPP*PGVX--XFLPXXXGXGEFXENXEKKKPXGPXXPLGGGHXXG 1219
P PG P GPP PG P G + P P G
Sbjct: 88 PSPGTVAPSDEPSPSGPPSPGPVNPSEDPQPSGPPSPGPVDPSEDPQPSVEPSEDHQPSG 147
Query: 1220 VPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXPXPXXAX--GGXXPX-XPXTX 1390
P G P P P P P P + G P P
Sbjct: 148 PPSPGPVDPSEDPQPSVEPSEDPQPSGPPSPGPVDPSEDPQPSGSSSPGPVDPSDEPSPS 207
Query: 1391 GPPPLGXXRPXXXGXXXPPPPGXAXXPPXXPXP 1489
GPP G P PP P P P
Sbjct: 208 GPPSPGPVDPSEDPKPSEPPSPGPVDPSDEPSP 240
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 31.9 bits (69), Expect = 1.2
Identities = 23/74 (31%), Positives = 23/74 (31%), Gaps = 3/74 (4%)
Frame = -3
Query: 1488 GXGXXGGXXAXPGGGGXXXPXXXGRXXPXGGG--PXVXGXXGXXP-PXAXXGXGXXXGXX 1318
G G GG GGGG G GGG P P P A G G G
Sbjct: 353 GAGGAGGYSGGGGGGGGGAAAGGGYNAGGGGGGAPQAAPAPQAAPAPAAPAGGGYNAGGG 412
Query: 1317 XXNRXXXPGAGGXG 1276
AGG G
Sbjct: 413 GGAGGGGGYAGGAG 426
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 31.5 bits (68), Expect = 1.6
Identities = 29/100 (29%), Positives = 29/100 (29%), Gaps = 1/100 (1%)
Frame = +2
Query: 1175 PXGPXXPLGGGHXXGVPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXPXPXXA 1354
P GP P G G P G P P PG P P P A
Sbjct: 182 PRGPPGPAGEAGAPG-PAGEPGTPAISE--------PLTPGAPGEPGDSGPPGPPGPPGA 232
Query: 1355 XGGXXPXXPXTXGPPPLGXXRPXXXGXXXPP-PPGXAXXP 1471
G P P P P G PP PPG A P
Sbjct: 233 PGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTP 272
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 1 (col-1) gene, complete cds. ).
Length = 296
Score = 31.5 bits (68), Expect = 1.6
Identities = 29/100 (29%), Positives = 29/100 (29%), Gaps = 1/100 (1%)
Frame = +2
Query: 1175 PXGPXXPLGGGHXXGVPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXPXPXXA 1354
P GP P G G P G P P PG P P P A
Sbjct: 182 PRGPPGPAGEAGAPG-PAGEPGTPAISE--------PLTPGAPGEPGDSGPPGPPGPPGA 232
Query: 1355 XGGXXPXXPXTXGPPPLGXXRPXXXGXXXPP-PPGXAXXP 1471
G P P P P G PP PPG A P
Sbjct: 233 PGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTP 272
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical protein
F23H12.4 protein.
Length = 301
Score = 31.1 bits (67), Expect = 2.1
Identities = 29/100 (29%), Positives = 29/100 (29%), Gaps = 1/100 (1%)
Frame = +2
Query: 1175 PXGPXXPLGGGHXXGVPXXGTGXPXXXXXXXXXXPXPPAPGXXXRFXXXXPXXXPXPXXA 1354
P GP P G G P G P P PG P P P A
Sbjct: 187 PRGPPGPAGEAGAPG-PAGEPGTPAISE--------PLTPGAPGEPGDSGPPGPPGPPGA 237
Query: 1355 XGGXXPXXPXTXGPPPLGXXRPXXXGXXXPP-PPGXAXXP 1471
G P P P P G PP PPG A P
Sbjct: 238 PGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPGPAGTP 277
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 31.1 bits (67), Expect = 2.1
Identities = 45/159 (28%), Positives = 48/159 (30%), Gaps = 10/159 (6%)
Frame = +2
Query: 1043 GPXPGRXXPGGRXKXLGPP*P-GVXXFLPXXXGXGEF--XENXEKKKPXGPXXPLGGGHX 1213
GP PG P G GPP P G P G F E P GP P G
Sbjct: 165 GP-PGLFDPSGAPPSGGPPGPFGPSGAPPSGGPPGPFNPSEAPPSGGPTGPFDPSGAPPS 223
Query: 1214 XGV--PXXGTGXPXXXXXXXXXXP--XPPAPGXXXRFXXXXPXXXPXPXXAXGGXXPX-X 1378
G P +G P P PP+ G F P P G P
Sbjct: 224 GGPPGPFNPSGAPPSGGPPGPFDPSGAPPSGGPPGPF---NPSGAPPSGGPPGPFDPSGA 280
Query: 1379 PXTXGPP-PLG-XXRPXXXGXXXPPPPGXAXXPPXXPXP 1489
P + GPP P P G P P A P P
Sbjct: 281 PPSGGPPGPFDPSGAPPSGGPPGPFDPSGAQPSGGPPGP 319
>Z99773-3|CAE11316.1| 305|Caenorhabditis elegans Hypothetical protein
H06A10.2 protein.
Length = 305
Score = 30.7 bits (66), Expect = 2.8
Identities = 27/94 (28%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Frame = +3
Query: 1200 GGXXPXXSPGXEPGXPTXXPXPXXXAXXXXXXXXXXDXXGXXPXXXRPLXXPXGAXSPXG 1379
G P SPG +PG P P + P P P G P G
Sbjct: 110 GPPGPGGSPG-KPGKPGKPGAPGAPGAAGKGASAPCEAKTPPPCQPCP-AGPPGPPGPDG 167
Query: 1380 PGXXAPPXWGXXGLXXXXXPXXPP-PGXPXPPXG 1478
P A P G G P PP P P P G
Sbjct: 168 PAGPAGPD-GEAGSPAAPSPPGPPGPPGPAGPAG 200
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 30.7 bits (66), Expect = 2.8
Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = -3
Query: 1488 GXGXXGGXXAXPGGGGXXXPXXXGRXXPXGGGPXVXGXXGXXPPXAXXGXGXXXGXXXXN 1309
G G G PG GG P G P GGP V G G P G G G
Sbjct: 42 GAGLGGPGIGGPGLGG---PGIGG---PGLGGPGVGGGPGAFGPYGRYGGGGYGGYGRYG 95
Query: 1308 RXXXPGA-GGXG 1276
R G GG G
Sbjct: 96 RYGRYGGYGGYG 107
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 30.7 bits (66), Expect = 2.8
Identities = 25/72 (34%), Positives = 25/72 (34%), Gaps = 1/72 (1%)
Frame = -3
Query: 1488 GXGXXGGXXAXPGGGGXXXPXXXGRXXPXGGGPXVXGXXGXXPPXAXXGXGXXXGXXXXN 1309
G G G PG GG P G P GGP V G G P G G G
Sbjct: 42 GAGLGGPGIGGPGLGG---PGIGG---PGLGGPGVGGGPGAFGPYGRYGGGGYGGYGRYG 95
Query: 1308 RXXXPGA-GGXG 1276
R G GG G
Sbjct: 96 RYGRYGGYGGYG 107
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.7
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = -3
Query: 1488 GXGXXGGXXAXPGGGGXXXPXXXGRXXPXGGGPXVXGXXGXXPPXAXXGXGXXXGXXXXN 1309
G G GG + GGG P G GG G G G G G
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSGGGGYATSGG-----GGSGGYATGGSSGGGYSSGGSSGG 262
Query: 1308 RXXXPGAGG 1282
G GG
Sbjct: 263 GYSTGGGGG 271
Score = 29.5 bits (63), Expect = 6.4
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = -3
Query: 1488 GXGXXGGXXAXPGGGGX-XXPXXXGRXXPXGGGPXVXGXXGXXPPXAXXGXGXXXGXXXX 1312
G G GG GGGG P GGG G G PP A G G G
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGC 90
Query: 1311 NRXXXPGAGGXG 1276
G GG G
Sbjct: 91 G-GGGGGCGGGG 101
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical protein
ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 3.7
Identities = 19/69 (27%), Positives = 20/69 (28%)
Frame = -3
Query: 1488 GXGXXGGXXAXPGGGGXXXPXXXGRXXPXGGGPXVXGXXGXXPPXAXXGXGXXXGXXXXN 1309
G G GG + GGG P G GG G G G G G
Sbjct: 208 GGGGCGGGGSSGGGGYASAPSGGGGYATSGG-----GGSGGYATGGSSGGGYSSGGSSGG 262
Query: 1308 RXXXPGAGG 1282
G GG
Sbjct: 263 GYSTGGGGG 271
Score = 29.5 bits (63), Expect = 6.4
Identities = 24/72 (33%), Positives = 24/72 (33%), Gaps = 1/72 (1%)
Frame = -3
Query: 1488 GXGXXGGXXAXPGGGGX-XXPXXXGRXXPXGGGPXVXGXXGXXPPXAXXGXGXXXGXXXX 1312
G G GG GGGG P GGG G G PP A G G G
Sbjct: 31 GGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGC 90
Query: 1311 NRXXXPGAGGXG 1276
G GG G
Sbjct: 91 G-GGGGGCGGGG 101
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 1283 PPAPGXXXRFXXXXPXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPP 1453
P AP P P P GG P PPP P G PPPP
Sbjct: 198 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPP--PLPPVGAGAPPPPPP 252
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +2
Query: 1337 PXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPP----GXAXXPPXXPXP 1489
P P P P PPP+G P PPPP G PP P P
Sbjct: 201 PPPPVPLTSNIPQAP-PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 254
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 1283 PPAPGXXXRFXXXXPXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPP 1453
P AP P P P GG P PPP P G PPPP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPP--PLPPVGAGAPPPPPP 238
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +2
Query: 1337 PXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPP----GXAXXPPXXPXP 1489
P P P P PPP+G P PPPP G PP P P
Sbjct: 187 PPPPVPLTSNIPQAP-PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = +2
Query: 1283 PPAPGXXXRFXXXXPXXXPXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPP 1453
P AP P P P GG P PPP P G PPPP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPP--PLPPVGAGAPPPPPP 238
Score = 30.3 bits (65), Expect = 3.7
Identities = 18/55 (32%), Positives = 19/55 (34%), Gaps = 4/55 (7%)
Frame = +2
Query: 1337 PXPXXAXGGXXPXXPXTXGPPPLGXXRPXXXGXXXPPPP----GXAXXPPXXPXP 1489
P P P P PPP+G P PPPP G PP P P
Sbjct: 187 PPPPVPLTSNIPQAP-PAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPPPPP 240
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 6.4
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 3/60 (5%)
Frame = +3
Query: 1308 DXXGXXPXXXRPLXXPXGAXSPXGPGXXAPPXWGXXGLXXXXXPXXPPP---GXPXPPXG 1478
D G RP P G SP P P G P PPP G P PP G
Sbjct: 240 DLSGEGNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPP--PPPKGTGTPPPPTG 297
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.5 bits (63), Expect = 6.4
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = +2
Query: 1370 PXXPXTXGPPPLGXXRPXXXGXXXPPPPGXAXXPPXXPXP 1489
P P G PP P PPPPG PP P P
Sbjct: 686 PGQPRPAGLPP---GVPPMFNLNAPPPPGIPGYPPAPPPP 722
>Z81533-12|CAB04333.2| 356|Caenorhabditis elegans Hypothetical
protein F36G9.1 protein.
Length = 356
Score = 29.1 bits (62), Expect = 8.5
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = -2
Query: 613 LVSTITNLWEKSKRMDMAVVNILFVINIFTIILLSRE 503
++ TI ++E +D V I ++NIF +I+LSR+
Sbjct: 25 IMQTIIPIFEHQSHLDFLVAVIGVLVNIFHLIVLSRK 61
>Z73972-2|CAA98258.1| 316|Caenorhabditis elegans Hypothetical protein
F15H10.2 protein.
Length = 316
Score = 29.1 bits (62), Expect = 8.5
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Frame = +2
Query: 1277 PXPPAPGXXXRFXXXXPXXXP-XPXXAXGGXXPXXPXTXGPP-PLGXXRPXXXG-XXXPP 1447
P P PG P P P + G P P GPP P G +P G P
Sbjct: 174 PAGP-PGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAG--QPGSNGNAGAPG 230
Query: 1448 PPGXAXXPPXXPXP 1489
PG P P P
Sbjct: 231 APGQVVDVPGTPGP 244
>Z73972-1|CAA98257.1| 316|Caenorhabditis elegans Hypothetical protein
F15H10.1 protein.
Length = 316
Score = 29.1 bits (62), Expect = 8.5
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Frame = +2
Query: 1277 PXPPAPGXXXRFXXXXPXXXP-XPXXAXGGXXPXXPXTXGPP-PLGXXRPXXXG-XXXPP 1447
P P PG P P P + G P P GPP P G +P G P
Sbjct: 174 PAGP-PGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAG--QPGSNGNAGAPG 230
Query: 1448 PPGXAXXPPXXPXP 1489
PG P P P
Sbjct: 231 APGQVVDVPGTPGP 244
>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical protein
R08B4.1b protein.
Length = 1160
Score = 29.1 bits (62), Expect = 8.5
Identities = 21/75 (28%), Positives = 21/75 (28%), Gaps = 4/75 (5%)
Frame = -3
Query: 1488 GXGXXGGXXAXPGGGGXXXPXXXGRXXPXGG----GPXVXGXXGXXPPXAXXGXGXXXGX 1321
G G GG GGGG G GG G G G A G G G
Sbjct: 800 GGGGGGGGSGGSGGGGSNSNSGGGGGNGGGGNGGGGNGNGGGAGDGNGGAGAGNGNGAGA 859
Query: 1320 XXXNRXXXPGAGGXG 1276
N G G
Sbjct: 860 GNGNGAGAGNGNGAG 874
>X51623-1|CAA35955.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.1 bits (62), Expect = 8.5
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Frame = +2
Query: 1277 PXPPAPGXXXRFXXXXPXXXP-XPXXAXGGXXPXXPXTXGPP-PLGXXRPXXXG-XXXPP 1447
P P PG P P P + G P P GPP P G +P G P
Sbjct: 174 PAGP-PGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAG--QPGSNGNAGAPG 230
Query: 1448 PPGXAXXPPXXPXP 1489
PG P P P
Sbjct: 231 APGQVVDVPGTPGP 244
>X51622-1|CAA35954.1| 316|Caenorhabditis elegans collagen protein.
Length = 316
Score = 29.1 bits (62), Expect = 8.5
Identities = 23/74 (31%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Frame = +2
Query: 1277 PXPPAPGXXXRFXXXXPXXXP-XPXXAXGGXXPXXPXTXGPP-PLGXXRPXXXG-XXXPP 1447
P P PG P P P + G P P GPP P G +P G P
Sbjct: 174 PAGP-PGPSGAPGQKGPSGAPGAPGQSGGAALPGPPGPAGPPGPAG--QPGSNGNAGAPG 230
Query: 1448 PPGXAXXPPXXPXP 1489
PG P P P
Sbjct: 231 APGQVVDVPGTPGP 244
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 29.1 bits (62), Expect = 8.5
Identities = 32/127 (25%), Positives = 34/127 (26%), Gaps = 9/127 (7%)
Frame = +2
Query: 1136 GXGEFXENXEKKKPXGPXXPLGGGHXXGVPXXGTGXPXXXXXXXXXXPXPPAP----GXX 1303
G E K P GP P G G P P P P G
Sbjct: 173 GASEGSAGGCKTCPAGPPGPPGPAGQAGRPGNDGQPGAPSFGGGVGAPGAPGPAGDAGSP 232
Query: 1304 XRFXXXXPXXXPXPXXAXGGXXPXXPXTXGP--PPLGXXRPXXXGXXXPP-PPGXAXXP- 1471
+ P G P P GP PP P PP PPG + P
Sbjct: 233 GQPGAPGQPGRPGKNAQGGSSRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSGRPG 292
Query: 1472 -PXXPXP 1489
P P P
Sbjct: 293 APGQPGP 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,237,387
Number of Sequences: 27780
Number of extensions: 555486
Number of successful extensions: 1847
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 1134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1591
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4287551336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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