Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_D09_e356_07.seq
         (1490 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    24   2.9  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   6.8  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    23   6.8  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    23   8.9  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 535 NIFTIILLSREETGDYVCIE*RPLGYPLNTPTLQ 434
           ++ +I  L+ E +GDY C+   P      T  LQ
Sbjct: 672 SLLSITNLAAEHSGDYTCVAANPAAEVRYTAKLQ 705


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 505  EETGDYVCIE*RPLGYPLNTP 443
            E  G  + ++ +PLG+PL+ P
Sbjct: 960  EVIGGAISLDGKPLGFPLDRP 980


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 23.0 bits (47), Expect = 6.8
 Identities = 9/28 (32%), Positives = 19/28 (67%)
 Frame = +3

Query: 729 YSETKX*LKIDLVLEEETGYSELMVXSI 812
           + ET+  L++ LV+EE++   E ++ S+
Sbjct: 213 FLETRQSLEVQLVIEEQSTEQERLLLSV 240


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 9/13 (69%), Positives = 10/13 (76%)
 Frame = +2

Query: 470 SLFYTNVIPCFLP 508
           S+FYT VIP F P
Sbjct: 153 SVFYTAVIPMFSP 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 336,861
Number of Sequences: 438
Number of extensions: 7668
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 52036875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)