Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_D06_e332_08.seq
(1553 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0971 + 8169197-8169311,8170351-8170458,8170533-8170725,817... 213 4e-55
03_06_0563 - 34738732-34738890,34738965-34739009,34739154-347392... 210 3e-54
01_06_1654 - 38924090-38924101,38924183-38924215,38924737-389248... 201 1e-51
05_06_0014 + 24854462-24854570,24854958-24855065,24855240-248554... 194 2e-49
04_03_0812 - 19922208-19922357,19922448-19922564,19922681-199227... 103 3e-22
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 56 6e-08
11_06_0110 + 20212221-20214011,20214072-20214368 29 9.9
06_03_1219 - 28491185-28494415 29 9.9
>07_01_0971 +
8169197-8169311,8170351-8170458,8170533-8170725,
8170811-8171069,8171151-8171207,8171433-8171480,
8171571-8171657,8171743-8171800,8171891-8171958,
8172066-8172161,8172244-8172291,8172658-8172696,
8172782-8172868,8173136-8173147
Length = 424
Score = 213 bits (519), Expect = 4e-55
Identities = 101/171 (59%), Positives = 125/171 (73%), Gaps = 2/171 (1%)
Frame = +3
Query: 141 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 314
EVFF+EKF +D WES WV SE E G++ T+GK+ D E DKG+QTSED RFYA+
Sbjct: 30 EVFFQEKF-EDGWESRWVKSEWKKDENMAGEWNHTSGKWNGDPE-DKGIQTSEDYRFYAI 87
Query: 315 SRKFKPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDIC 494
S ++ FSN+ K LV+QFSVKHEQ +DCGGGY+K+ +DQK G+TPY IMFGPDIC
Sbjct: 88 SAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYSIMFGPDIC 147
Query: 495 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLSDN 647
G TKKVH IF+ KNHLIKKD+ C+ D +H+YTLI+ PD TY +L DN
Sbjct: 148 GYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYTILIDN 198
Score = 33.1 bits (72), Expect = 0.61
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 658 ESGELEADWDFLPXKKIKDPXAK 726
+SG + WD LP K+IKDP AK
Sbjct: 202 QSGSIYEHWDILPPKQIKDPEAK 224
>03_06_0563 -
34738732-34738890,34738965-34739009,34739154-34739201,
34739291-34739386,34739467-34739534,34739633-34739690,
34739783-34739869,34740004-34740051,34740360-34740416,
34740525-34740783,34740877-34741102,34741168-34741275,
34741885-34741987
Length = 453
Score = 210 bits (512), Expect = 3e-54
Identities = 124/297 (41%), Positives = 156/297 (52%), Gaps = 13/297 (4%)
Frame = +3
Query: 141 EVFFEEKFSDDSWESNWVYSE--HPGKEFGKFKLTAGKFYNDAEADKGL----------- 281
EVFF+EKF DD WE WV SE G++ T+GK+Y DA+ DKG+
Sbjct: 26 EVFFQEKF-DDGWEDRWVKSEWKKDDNRAGEWNHTSGKWYGDAD-DKGMCEVTLLLCAGI 83
Query: 282 QTSEDARFYALSRKFKPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGET 461
QTSED RFYA+S K+ FS++ K LV+QFSVKHEQ +DCGGGY+K+ +DQK GET
Sbjct: 84 QTSEDYRFYAISAKYPEFSSKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGET 143
Query: 462 PYEIMFGPDICGPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLS 641
PY IMFGPDICG TKKVH I + GKNHLIKKD+ CK D TH+YTLI++PD Y +L
Sbjct: 144 PYSIMFGPDICGYATKKVHAILTKNGKNHLIKKDVPCKTDQLTHVYTLIIRPDAKYSILI 203
Query: 642 DNEKV*IW*IRSRLGLPTXEEDQGSXSKXNLKIWDHXXXXXXXXXXXXXXDWDKPLSXIS 821
DN + I + + + +K + WD D P I+
Sbjct: 204 DNTEKQTGSIYDDWNIIPPKNKRDPEAK-KPEDWDDNEYIPDPEDKKPEGYDDIP-KEIT 261
Query: 822 DP*XP*ALXIWMMRXXXXWNHPMXXTPDYXGXWAXXKLXPLLXRXXGXTPXXXXPEY 992
DP W W P P+Y G W KL + P P+Y
Sbjct: 262 DPEAT-KPEDWDDEEDGEWTAPTIPNPEYKGPWNQKKLKNPNYKGKWKAPLIPNPDY 317
Score = 31.1 bits (67), Expect = 2.5
Identities = 22/80 (27%), Positives = 27/80 (33%)
Frame = +2
Query: 731 PEDLGPQTHXSPDPEDNETRXLGQTLEXHFGPLMXVSPEXLDDEXXXXXEPPYDXXPXLX 910
PED + PDPED + + P PE DDE P P
Sbjct: 233 PEDWDDNEYI-PDPEDKKPEGYDDIPKEITDP-EATKPEDWDDEEDGEWTAPTIPNPEYK 290
Query: 911 GRLGPXQIXTPAXKGPWXHP 970
G ++ P KG W P
Sbjct: 291 GPWNQKKLKNPNYKGKWKAP 310
>01_06_1654 -
38924090-38924101,38924183-38924215,38924737-38924829,
38924909-38924965,38925048-38925143,38925237-38925304,
38925429-38925486,38925572-38925658,38925935-38925982,
38926060-38926116,38926200-38926458,38926666-38926858,
38926991-38927098,38927849-38927957
Length = 425
Score = 201 bits (491), Expect = 1e-51
Identities = 91/173 (52%), Positives = 127/173 (73%), Gaps = 2/173 (1%)
Frame = +3
Query: 141 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 314
EV FEE+F +D WES WV S+ E G FK TAG++ D + DKG+QT+ DAR +A+
Sbjct: 28 EVIFEERF-EDGWESRWVKSDWKRSEGKAGTFKHTAGRYSGDPD-DKGIQTTLDARHFAI 85
Query: 315 SRKFKPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDIC 494
S K FSN+G+ LV+Q+S+K EQDI+CGGGY+K+ ++QK G+TPY +MFGPDIC
Sbjct: 86 SAKIPEFSNKGRTLVLQYSIKFEQDIECGGGYIKLMSGYVNQKKFSGDTPYSLMFGPDIC 145
Query: 495 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLSDNEK 653
G TKK+H+I SY+G+N+ IKKD++C+ D TH+YT I++PD +Y +L DN +
Sbjct: 146 GTQTKKLHLILSYQGQNYPIKKDLQCETDKLTHVYTFILRPDASYSILVDNRE 198
Score = 35.1 bits (77), Expect = 0.15
Identities = 15/26 (57%), Positives = 17/26 (65%)
Frame = +1
Query: 649 RRFESGELEADWDFLPXKKIKDPXAK 726
R ESG + DWD LP +KIKD AK
Sbjct: 197 RERESGSMYTDWDILPPRKIKDVHAK 222
>05_06_0014 +
24854462-24854570,24854958-24855065,24855240-24855432,
24855892-24856150,24856236-24856292,24856370-24856417,
24856725-24856811,24856885-24856942,24857084-24857151,
24857279-24857374,24857483-24857539,24857906-24857952,
24858184-24858210,24858312-24858504
Length = 468
Score = 194 bits (473), Expect = 2e-49
Identities = 89/173 (51%), Positives = 122/173 (70%), Gaps = 2/173 (1%)
Frame = +3
Query: 141 EVFFEEKFSDDSWESNWVYSEHPGKE--FGKFKLTAGKFYNDAEADKGLQTSEDARFYAL 314
EV FEE+F DD W S WV S+ E G FK TAG + D + D+G+QT+ DA+ +A+
Sbjct: 28 EVIFEERFDDD-WGSRWVKSDWKKSEGKAGTFKHTAGSYSGDPD-DRGIQTTSDAKHFAI 85
Query: 315 SRKFKPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVFDCRLDQKDMHGETPYEIMFGPDIC 494
S KF FSN+ + LVVQ+S+K EQDI+CGG Y+K+ ++QK G+TPY MFGPDIC
Sbjct: 86 SAKFPEFSNKNRTLVVQYSIKIEQDIECGGAYIKLMSGYVNQKKFGGDTPYSFMFGPDIC 145
Query: 495 GPGTKKVHVIFSYKGKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLSDNEK 653
G TKK+H+I SY+G+N+ IKKD++C+ D TH YT I++PD +Y +L DN +
Sbjct: 146 GDQTKKLHLILSYQGQNYPIKKDLKCETDKLTHFYTFILRPDASYSLLVDNRE 198
Score = 31.5 bits (68), Expect = 1.9
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 649 RRFESGELEADWDFLPXKKIKDPXAK 726
R E G + DWD LP +KIK+ AK
Sbjct: 197 REREFGSMYTDWDILPPRKIKESNAK 222
>04_03_0812 -
19922208-19922357,19922448-19922564,19922681-19922752,
19922864-19923993,19924939-19925008,19925125-19925199
Length = 537
Score = 103 bits (248), Expect = 3e-22
Identities = 70/178 (39%), Positives = 95/178 (53%), Gaps = 10/178 (5%)
Frame = +3
Query: 150 FEEKFSDDSWESNWVYSEHPGKEFGKFKLTAGKFYNDAEADKGLQTSEDARFYALSRKF- 326
F E F D+S+E WV S GK+ K K +D D GL SE A+ YA+ ++
Sbjct: 27 FYEPF-DESFEGRWVLS---GKDDYKGVWKHEK--SDGHEDYGLLVSEKAKKYAIIKELD 80
Query: 327 KPFSNEGKPLVVQFSVKHEQDIDCGGGYLKVF---DCRLDQKDMHGETPYEIMFGPDICG 497
+P + + +V+QF V+ + ++CGG YLK D D K+ ETPY IMFGPD CG
Sbjct: 81 EPVTLKDGTVVLQFEVRLQNGLECGGAYLKYIRPQDAAWDAKEFDNETPYTIMFGPDKCG 140
Query: 498 PGTKKVHVIFSYK----GK--NHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLSDNEK 653
T KVH I +K GK H +K D +H+YT I+KPDN +L D E+
Sbjct: 141 -STNKVHFILKHKNPKTGKYVEHHLKFPPSVPYDKLSHVYTAILKPDNEVRILVDGEE 197
>03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 56.4 bits (130), Expect = 6e-08
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +3
Query: 537 GKNHLIKKDIRCKDDVYTHLYTLIVKPDNTYEVLSDN 647
G NHLIKKD+ C+ D TH+YTLI++PD Y +L DN
Sbjct: 515 GNNHLIKKDVPCETDQLTHVYTLIIRPDAKYSILIDN 551
>11_06_0110 + 20212221-20214011,20214072-20214368
Length = 695
Score = 29.1 bits (62), Expect = 9.9
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = -2
Query: 397 QSMSCSCFTLNCT--TKGLPSLLNGLNFLDRA*NLASSDVCKPLSASASL*NFPAVNLNL 224
++MS L+C +P + L LD + NL S DV + + L N L
Sbjct: 526 ENMSLEKLYLDCNHIADRIPRMPRNLMLLDISYNLISGDVPQSICELQKLNGLDLSNNLL 585
Query: 223 PNSFPGCSLYTQ 188
FP CSL ++
Sbjct: 586 EGEFPQCSLMSR 597
>06_03_1219 - 28491185-28494415
Length = 1076
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 208 GCSLYTQFDSHESSENFSSKNTSQFIDEIANKLAIAST 95
G SL+ S ++N SSK+T F+ E+A + A A T
Sbjct: 741 GASLFDSMSSELYNDNDSSKDTIFFMSEVAGEAAKAVT 778
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,606,831
Number of Sequences: 37544
Number of extensions: 530102
Number of successful extensions: 1269
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1210
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5012110656
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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