Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_D03_e308_07.seq
(1610 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong s... 140 3e-33
At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong s... 139 4e-33
At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong s... 139 4e-33
At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar ... 126 3e-29
At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol sp... 112 5e-25
At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol spe... 105 6e-23
At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putati... 50 4e-06
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 34 0.23
At3g02890.1 68416.m00284 PHD finger protein-related contains low... 32 0.93
At2g33240.1 68415.m04072 myosin, putative similar to myosin (GI:... 30 4.9
At2g28990.1 68415.m03526 leucine-rich repeat protein kinase, put... 29 6.5
>At1g60740.1 68414.m06838 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 140 bits (338), Expect = 3e-33
Identities = 71/160 (44%), Positives = 102/160 (63%), Gaps = 4/160 (2%)
Frame = +3
Query: 150 MAPIKVGDMLP--SLDLF-EDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 320
MAPI VGD++P ++ F E+ V+ I AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 321 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNLPP 500
A+++KS+G+ EI+C SVNDP+VM AWG + V+ +AD +G + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYQENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 501 LG-GFRSKRFSMVINDSKVEELNVEPDGTGLSCSLADKLK 617
G G RS+RF++++++ KV NVE G S D LK
Sbjct: 121 KGLGIRSRRFALLLDNLKVTVANVENGGEFTVSSAEDILK 160
>At1g65980.1 68414.m07486 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 139 bits (337), Expect = 4e-33
Identities = 71/160 (44%), Positives = 101/160 (63%), Gaps = 4/160 (2%)
Frame = +3
Query: 150 MAPIKVGDMLP--SLDLF-EDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 320
MAPI VGD++P ++ F E+ + + AGKKV+LF VPGAFTP CS H+PG++
Sbjct: 1 MAPIAVGDVVPDGTISFFDENDQLQTASVHSLAAGKKVILFGVPGAFTPTCSMKHVPGFI 60
Query: 321 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNLPP 500
+ A+++KS+GV EI+C SVNDP+VM AWG + V+ +AD +G + L L +L
Sbjct: 61 EKAEELKSKGVDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 501 LG-GFRSKRFSMVINDSKVEELNVEPDGTGLSCSLADKLK 617
G G RS+RF+++++D KV NVE G S D LK
Sbjct: 121 KGLGVRSRRFALLLDDLKVTVANVESGGEFTVSSADDILK 160
>At1g65970.1 68414.m07485 peroxiredoxin type 2, putative strong
similarity to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profile: PF00578
AhpC/TSA (alkyl hydroperoxide reductase and
thiol-specific antioxidant) family
Length = 162
Score = 139 bits (337), Expect = 4e-33
Identities = 71/160 (44%), Positives = 102/160 (63%), Gaps = 4/160 (2%)
Frame = +3
Query: 150 MAPIKVGDMLP--SLDLF-EDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 320
MAPI VGD++P ++ F E+ V+ I AGKKV+LF VPGAFTP CS +H+PG++
Sbjct: 1 MAPITVGDVVPDGTISFFDENDQLQTVSVHSIAAGKKVILFGVPGAFTPTCSMSHVPGFI 60
Query: 321 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNLPP 500
A+++KS+G+ EI+C SVNDP+VM AWG + V+ +AD +G + L L +L
Sbjct: 61 GKAEELKSKGIDEIICFSVNDPFVMKAWGKTYPENKHVKFVADGSGEYTHLLGLELDLKD 120
Query: 501 LG-GFRSKRFSMVINDSKVEELNVEPDGTGLSCSLADKLK 617
G G RS+RF++++++ KV NVE G S D LK
Sbjct: 121 KGLGIRSRRFALLLDNLKVTVANVESGGEFTVSSAEDILK 160
>At3g52960.1 68416.m05838 peroxiredoxin type 2, putative similar to
type 2 peroxiredoxin [Brassica rapa subsp. pekinensis]
GI:4928472; contains Pfam profile: PF00578 AhpC/TSA
(alkyl hydroperoxide reductase and thiol-specific
antioxidant) family
Length = 234
Score = 126 bits (305), Expect = 3e-29
Identities = 70/172 (40%), Positives = 101/172 (58%), Gaps = 7/172 (4%)
Frame = +3
Query: 123 RALHTSKIAMAPIKVGDMLPSLDLFEDSPAN----KVNTCEITAGKKVVLFAVPGAFTPG 290
R+ T+ + A I VGD LP L P+ V +TAGKK +LFAVPGAFTP
Sbjct: 62 RSFATTPVT-ASISVGDKLPDSTLSYLDPSTGDVKTVTVSSLTAGKKTILFAVPGAFTPT 120
Query: 291 CSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIK 470
CS+ H+PG+V A +++S+G+ I C+SVND +VM AW +V +L+D NG F
Sbjct: 121 CSQKHVPGFVSKAGELRSKGIDVIACISVNDAFVMEAWRKDLGINDEVMLLSDGNGEFTG 180
Query: 471 ALDLGTNL--PPLG-GFRSKRFSMVINDSKVEELNVEPDGTGLSCSLADKLK 617
L + +L P+G G RS+R++++ +D V+ LN+E G + S D LK
Sbjct: 181 KLGVELDLRDKPVGLGVRSRRYAILADDGVVKVLNLEEGGAFTNSSAEDMLK 232
>At1g65990.1 68414.m07488 type 2 peroxiredoxin-related / thiol
specific antioxidant / mal allergen family protein
similar to type 2 peroxiredoxin [Brassica rapa subsp.
pekinensis] GI:4928472; contains Pfam profiles PF00646:
F-box domain, PF00578: AhpC/TSA family
Length = 553
Score = 112 bits (270), Expect = 5e-25
Identities = 62/161 (38%), Positives = 99/161 (61%), Gaps = 4/161 (2%)
Frame = +3
Query: 150 MAPIKVGDMLP--SLDLFEDSPA-NKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYV 320
MAPI VGD +P S+ F+D V+ + AGKKV+LF VPGAF P CS H+ G++
Sbjct: 1 MAPIDVGDFVPDGSISFFDDDDQLQTVSVHSLAAGKKVILFGVPGAFPPTCSMNHVNGFI 60
Query: 321 QNADKMKSEGVSEIVCVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNLPP 500
+ A+++KS GV EI+C+S +DP+++ A + V+ + D +G +I+ L L +
Sbjct: 61 EKAEELKSNGVDEIICLSGDDPFMITACSENKH----VKFVEDGSGEYIQLLGLELEVKD 116
Query: 501 LG-GFRSKRFSMVINDSKVEELNVEPDGTGLSCSLADKLKV 620
G G RS+ F++++++ KV +NV G+G CSL +K+
Sbjct: 117 KGLGVRSRGFALLLDNLKVIVVNV---GSGGDCSLFQLMKM 154
>At3g06050.1 68416.m00692 alkyl hydroperoxide reductase/thiol
specific antioxidant (AhpC/TSA)/mal allergen family
protein identical to SP|Q9M7T0 Putative peroxiredoxin,
mitochondrial precursor {Arabidopsis thaliana}; similar
to thioredoxin peroxidase [Capsicum annuum] GI:18654477;
contains Pfam profile: PF00578 AhpC/TSA (alkyl
hydroperoxide reductase and thiol-specific antioxidant)
family
Length = 201
Score = 105 bits (253), Expect = 6e-23
Identities = 64/177 (36%), Positives = 97/177 (54%), Gaps = 4/177 (2%)
Frame = +3
Query: 54 RAAGNSARGIVRGISTFNNGVYVRALHTSKIAMAPIKVGDMLPSLDLFEDSPANKVNTC- 230
R+A NSAR I + G A T + AP G L +++ ++K +T
Sbjct: 15 RSAANSAR-----IGVSSRGFSKLAEGTDITSAAP---GVSLQKARSWDEGVSSKFSTTP 66
Query: 231 --EITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAW 404
+I GKKVV+F +PGA+T CS+ H+P Y + DK K++G+ ++CVSVNDP+ + W
Sbjct: 67 LSDIFKGKKVVIFGLPGAYTGVCSQQHVPSYKSHIDKFKAKGIDSVICVSVNDPFAINGW 126
Query: 405 GAQHNTKGKVRMLADPNGAFIKALDLGTNL-PPLGGFRSKRFSMVINDSKVEELNVE 572
+ K + D +G F K+L L +L L G RS+R+S + D KV+ +NVE
Sbjct: 127 AEKLGAKDAIEFYGDFDGKFHKSLGLDKDLSAALLGPRSERWSAYVEDGKVKAVNVE 183
>At1g48130.1 68414.m05371 peroxiredoxin (PER1) / rehydrin, putative
identical to peroxiredoxin (Rehydrin homolog)
[Arabidopsis thaliana] SWISS-PROT:O04005; contains Pfam
profile: PF00578 AhpC/TSA (alkyl hydroperoxide reductase
and thiol-specific antioxidant) family
Length = 216
Score = 50.0 bits (114), Expect = 4e-06
Identities = 42/151 (27%), Positives = 72/151 (47%), Gaps = 5/151 (3%)
Frame = +3
Query: 150 MAPIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFAVPGAFTPGCSKTHLPGYVQNA 329
M I +GD +P+L++ ++ +K + A VLF+ PG FTP C+ T L + A
Sbjct: 1 MPGITLGDTVPNLEV--ETTHDKFKLHDYFANSWTVLFSHPGDFTPVCT-TELGAMAKYA 57
Query: 330 DKMKSEGVSEIVCVSVNDPYVMAAW-----GAQHNTKGKVRMLADPNGAFIKALDLGTNL 494
+ GV +++ +S +D W H +K ++ADPN I L++ +
Sbjct: 58 HEFDKRGV-KLLGLSCDDVQSHKDWIKDIEAFNHGSKVNYPIIADPNKEIIPQLNM---I 113
Query: 495 PPLGGFRSKRFSMVINDSKVEELNVEPDGTG 587
P+ S+ +V DSK++ + P TG
Sbjct: 114 DPIENGPSRALHIVGPDSKIKLSFLYPSTTG 144
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 34.3 bits (75), Expect = 0.23
Identities = 27/110 (24%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Frame = +3
Query: 96 STFNNGVYVRALHTSKIA---MAPIKVGDMLPSLDLFEDSPANKVNTCEITAGKKVVLFA 266
ST + Y+ + +S + A + G P L + + K + + GK VVL+
Sbjct: 45 STLTHSSYISPVSSSSLKGLIFAKVNKGQAAPDFTLKDQN--GKPVSLKKYKGKPVVLYF 102
Query: 267 VPGAFTPGCSKTHLPGYVQNADKMKSEGVSEIVCVSVNDPYVMAAWGAQH 416
P TPGC+K + + +K K G +E++ +S +D A+ +++
Sbjct: 103 YPADETPGCTK-QACAFRDSYEKFKKAG-AEVIGISGDDSASHKAFASKY 150
>At3g02890.1 68416.m00284 PHD finger protein-related contains low
similarity to PHD-finger domain proteins
Length = 963
Score = 32.3 bits (70), Expect = 0.93
Identities = 21/75 (28%), Positives = 39/75 (52%)
Frame = -2
Query: 475 RALMNAPFGSASIRTFPLVLCWAPQAAITYGSFTDTHTISETPSLFILSAFCTYPGK*VL 296
R + G+ ++ + P C A + GS +D S+ S +L++ C++ G +L
Sbjct: 4 RGRLEIQSGTCNVCSAPCSSCMHHNAEFS-GSKSDES--SDENSHGVLASQCSFNGDNLL 60
Query: 295 EHPGVNAPGTANKTT 251
GVNAPG+++ T+
Sbjct: 61 RSSGVNAPGSSHNTS 75
>At2g33240.1 68415.m04072 myosin, putative similar to myosin
(GI:433663) [Arabidopsis thaliana]; myosin my5A
(SP:Q02440) {Gallus gallus}
Length = 1770
Score = 29.9 bits (64), Expect = 4.9
Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +3
Query: 366 CVSVNDPYVMAAWGAQHNTKGKVRMLADPNGAFIKALDLGTNL-PPLGGFRSKRFSMVIN 542
C + +V ++W NT+ + +L + I DL TNL P L + R +
Sbjct: 1636 CSQATEDFVGSSWDELKNTRQALVLLVTEQKSTITYDDLTTNLCPALSTQQLYRICTLCK 1695
Query: 543 DSKVEELNVEPD 578
E+ NV PD
Sbjct: 1696 IDDHEDQNVSPD 1707
>At2g28990.1 68415.m03526 leucine-rich repeat protein kinase,
putative similar to light repressible receptor protein
kinase [Arabidopsis thaliana] gi|1321686|emb|CAA66376;
contains leucine rich repeat (LRR) domains,
Pfam:PF00560; contains protein kinase domain,
Pfam:PF00069
Length = 884
Score = 29.5 bits (63), Expect = 6.5
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 7/71 (9%)
Frame = +3
Query: 360 IVCVSVNDPYVMAAWGAQHNTKGKVRMLADPN-------GAFIKALDLGTNLPPLGGFRS 518
I+ S P+++ W + TKG +R + DPN G+ KA++L + L R
Sbjct: 778 IIQQSREKPHIVE-WVSFMITKGDLRSIMDPNLHQDYDIGSVWKAIELAMSCVSLSSARR 836
Query: 519 KRFSMVINDSK 551
S V+N+ K
Sbjct: 837 PNMSRVVNELK 847
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,882,246
Number of Sequences: 28952
Number of extensions: 460331
Number of successful extensions: 959
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 952
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4356643584
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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