Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_D02_e300_08.seq
         (1493 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        24   9.8  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        24   9.8  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        24   9.8  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        24   9.8  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   9.8  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    24   9.8  

>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 103 CSCGSSYIGPSCQ 65
           CSC  S+ GP C+
Sbjct: 47  CSCDESFFGPFCE 59


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 103 CSCGSSYIGPSCQ 65
           CSC  S+ GP C+
Sbjct: 47  CSCDESFFGPFCE 59


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 103 CSCGSSYIGPSCQ 65
           CSC  S+ GP C+
Sbjct: 47  CSCDESFFGPFCE 59


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 103 CSCGSSYIGPSCQ 65
           CSC  S+ GP C+
Sbjct: 47  CSCDESFFGPFCE 59


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 822 QHK*HNRNECILKKDSSISTY 884
           +H+  NR   + K DS+I TY
Sbjct: 346 EHRIRNREALVAKTDSTIDTY 366


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 24.2 bits (50), Expect = 9.8
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 103 CSCGSSYIGPSCQ 65
           CSC  S+ GP C+
Sbjct: 623 CSCDESFFGPFCE 635


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,127,379
Number of Sequences: 2352
Number of extensions: 21222
Number of successful extensions: 75
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 75
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 174749850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)