Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_D01_e292_07.seq
         (1545 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0565 + 4141592-4141879                                           32   1.1  
11_06_0294 + 22022630-22024006,22024109-22024234,22024319-220244...    30   4.3  
11_06_0278 - 21854859-21855101,21855529-21855587,21855684-218557...    30   4.3  
09_02_0036 + 3217163-3217584,3217752-3218322                           30   4.3  
10_08_0343 - 16960764-16960895,16961166-16961171,16961272-169616...    29   7.5  
02_05_0516 + 29694631-29695182                                         29   9.9  
02_01_0721 - 5373449-5373603,5373912-5373981,5374473-5374620,537...    29   9.9  

>02_01_0565 + 4141592-4141879
          Length = 95

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = +2

Query: 221 VKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYMI 400
           +K+ E+ G+L  R    + V  +  +A  R+  KY++       P F ++ G M F Y+I
Sbjct: 13  MKVREVPGYLKPRLSWEN-VKKSSDQAVDRYIDKYIETSSP--EPLFHVIYGLMAFSYLI 69

Query: 401 NYGKMKHH 424
           N  K + H
Sbjct: 70  NLPKERRH 77


>11_06_0294 +
           22022630-22024006,22024109-22024234,22024319-22024423,
           22024525-22024659,22024798-22024847,22026487-22026545,
           22026819-22026928,22027941-22028174,22028278-22028377,
           22028699-22028829,22029834-22029914,22029970-22030128
          Length = 888

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 679 LNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQIVSVNILLKFAL 822
           L+R +   PF SW N  +A  D+ +  L  LNG    +   + LK  L
Sbjct: 399 LSRPSRQDPFTSWDNMRQACLDKGTHALGKLNGRAAALIEKVNLKRGL 446


>11_06_0278 -
           21854859-21855101,21855529-21855587,21855684-21855711,
           21855812-21856702,21856792-21857011,21857638-21857687,
           21863174-21863284,21863379-21863483,21863568-21863693,
           21863796-21865187
          Length = 1074

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 16/48 (33%), Positives = 23/48 (47%)
 Frame = +1

Query: 679 LNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWQIVSVNILLKFAL 822
           L+R +   PF SW N  +A  D+ +  L  LNG    +   + LK  L
Sbjct: 404 LSRPSRQDPFTSWDNMRQACLDKGTHALGKLNGRAAALIEKVNLKRGL 451


>09_02_0036 + 3217163-3217584,3217752-3218322
          Length = 330

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 617 ITIHWPSFYNVV-TGKTLALPNLIALQH 697
           I+  W  F N+V +G TL++PN + LQH
Sbjct: 69  ISAGWSRFINLVQSGPTLSIPNYVLLQH 96


>10_08_0343 - 16960764-16960895,16961166-16961171,16961272-16961640,
            16962118-16962304,16962567-16962759,16962864-16963137,
            16963215-16963374,16963985-16964199,16964784-16964876,
            16965192-16965260,16965293-16965445,16965534-16965737,
            16966416-16966691,16967336-16967431,16967585-16967788,
            16967877-16968069,16968229-16968374,16968771-16969425,
            16971462-16971774,16971989-16972139,16972602-16973815,
            16973933-16974182,16974784-16975035
          Length = 1934

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
 Frame = +1

Query: 337  KSRHGSILPTACWQ-HDFLLYDQLWQDEAPQELQVPLKE 450
            + R G + P AC++ +  ++YD + Q + P+ L+ PL+E
Sbjct: 1550 RGRAGRVQPGACYRLYPKVIYDAMPQFQLPEILRTPLQE 1588


>02_05_0516 + 29694631-29695182
          Length = 183

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +2

Query: 245 WLGRRSKT-PS--AVMGACSRAWWRWQHKYVQPKKVGMA 352
           W  RRSK+ PS  A  G   + WW W   ++  KK G A
Sbjct: 67  WAFRRSKSAPSLGAFAGGPLKRWWDWGVGWLMSKKPGFA 105


>02_01_0721 -
           5373449-5373603,5373912-5373981,5374473-5374620,
           5374755-5374870,5374955-5375033,5375163-5375233,
           5376201-5376344,5376439-5376592,5376906-5376941,
           5377145-5377226,5377315-5377408,5377993-5378062,
           5378177-5378274,5378745-5378827,5379335-5379428,
           5379533-5380036
          Length = 665

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +2

Query: 116 EKMAFGDYPKEYNPAVHGPYDPARYYGKPDTPFG 217
           E + FGDY  + +     P DPA   GKP + +G
Sbjct: 596 EGVVFGDYGSDLSSGPKVPGDPAGARGKPGSGYG 629


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,785,063
Number of Sequences: 37544
Number of extensions: 638122
Number of successful extensions: 1834
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4977304332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)