Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_D01_e292_07.seq
         (1545 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR542155-1|CAG46952.1|   94|Homo sapiens ATP5J2 protein.               59   4e-08
CR456891-1|CAG33172.1|   94|Homo sapiens ATP5J2 protein.               59   4e-08
AY046911-1|AAL06647.1|   88|Homo sapiens F1Fo-ATP synthase compl...    59   4e-08
AF088918-1|AAC34895.1|   94|Homo sapiens F1F0-type ATPase subuni...    59   4e-08
AK223348-1|BAD97068.1|   94|Homo sapiens ATP synthase, H+ transp...    59   5e-08
BC003678-1|AAH03678.1|   94|Homo sapiens ATP synthase, H+ transp...    58   9e-08

>CR542155-1|CAG46952.1|   94|Homo sapiens ATP5J2 protein.
          Length = 94

 Score = 59.3 bits (137), Expect = 4e-08
 Identities = 26/75 (34%), Positives = 42/75 (56%)
 Frame = +2

Query: 218 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 397
           +VKL E+  W+  R  +PS + GA  R ++R+ +KY+  KK  ++    +L   + F Y 
Sbjct: 20  EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79

Query: 398 INYGKMKHHRNYKYH 442
            +Y  +KH R  KYH
Sbjct: 80  FSYKHLKHERLRKYH 94


>CR456891-1|CAG33172.1|   94|Homo sapiens ATP5J2 protein.
          Length = 94

 Score = 59.3 bits (137), Expect = 4e-08
 Identities = 26/75 (34%), Positives = 42/75 (56%)
 Frame = +2

Query: 218 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 397
           +VKL E+  W+  R  +PS + GA  R ++R+ +KY+  KK  ++    +L   + F Y 
Sbjct: 20  EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79

Query: 398 INYGKMKHHRNYKYH 442
            +Y  +KH R  KYH
Sbjct: 80  FSYKHLKHERLRKYH 94


>AY046911-1|AAL06647.1|   88|Homo sapiens F1Fo-ATP synthase complex
           Fo membrane domain f subunit protein.
          Length = 88

 Score = 59.3 bits (137), Expect = 4e-08
 Identities = 26/75 (34%), Positives = 42/75 (56%)
 Frame = +2

Query: 218 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 397
           +VKL E+  W+  R  +PS + GA  R ++R+ +KY+  KK  ++    +L   + F Y 
Sbjct: 14  EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 73

Query: 398 INYGKMKHHRNYKYH 442
            +Y  +KH R  KYH
Sbjct: 74  FSYKHLKHERLRKYH 88


>AF088918-1|AAC34895.1|   94|Homo sapiens F1F0-type ATPase subunit f
           protein.
          Length = 94

 Score = 59.3 bits (137), Expect = 4e-08
 Identities = 26/75 (34%), Positives = 42/75 (56%)
 Frame = +2

Query: 218 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 397
           +VKL E+  W+  R  +PS + GA  R ++R+ +KY+  KK  ++    +L   + F Y 
Sbjct: 20  EVKLGELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79

Query: 398 INYGKMKHHRNYKYH 442
            +Y  +KH R  KYH
Sbjct: 80  FSYKHLKHERLRKYH 94


>AK223348-1|BAD97068.1|   94|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit f
           isoform 2a v protein.
          Length = 94

 Score = 58.8 bits (136), Expect = 5e-08
 Identities = 26/75 (34%), Positives = 42/75 (56%)
 Frame = +2

Query: 218 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 397
           +VKL E+  W+  R  +PS + GA  R ++R+ +KY+  KK  ++    +L   + F Y 
Sbjct: 20  EVKLGELPSWVLMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79

Query: 398 INYGKMKHHRNYKYH 442
            +Y  +KH R  KYH
Sbjct: 80  FSYKHLKHERLRKYH 94


>BC003678-1|AAH03678.1|   94|Homo sapiens ATP synthase, H+
           transporting, mitochondrial F0 complex, subunit F2
           protein.
          Length = 94

 Score = 58.0 bits (134), Expect = 9e-08
 Identities = 26/75 (34%), Positives = 42/75 (56%)
 Frame = +2

Query: 218 QVKLNEIGGWLGRRSKTPSAVMGACSRAWWRWQHKYVQPKKVGMAPFFQLLVGSMTFFYM 397
           +VKL E+  W+  R  +PS + GA  R ++R+ +KY+  KK  ++    +L   + F Y 
Sbjct: 20  EVKLLELPSWILMRDFSPSGIFGAFQRGYYRYYNKYINVKKGSISGITMVLACYVLFSYS 79

Query: 398 INYGKMKHHRNYKYH 442
            +Y  +KH R  KYH
Sbjct: 80  FSYKHLKHERLRKYH 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,041,266
Number of Sequences: 237096
Number of extensions: 3629739
Number of successful extensions: 10683
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10683
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23074645414
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)