Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_C12_e379_06.seq
         (1539 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...   174   1e-45
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...   114   1e-27
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...   113   4e-27

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score =  174 bits (424), Expect = 1e-45
 Identities = 85/130 (65%), Positives = 94/130 (72%), Gaps = 3/130 (2%)
 Frame = -3

Query: 799 FDRHYEQNRAPTRASISMPHG*KIXLNS*KLSCTGLMKFYKIITMYISV---TMTQVIQW 629
           FDRHYE+NRAP        H   +  N   L    L    +I+  +  V   TMTQVIQW
Sbjct: 409 FDRHYEENRAPLGLYF---HAAWLKNNPEFLDAF-LYWVDEILANHNDVYFVTMTQVIQW 464

Query: 628 IQNPRTITEAKNFEPWREKCAVEGIPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPW 449
           IQNPRTITE+KNFEPWREKC VEG P CWVPHSCKLTSKEVPGETINLQTC+RCP NYPW
Sbjct: 465 IQNPRTITESKNFEPWREKCVVEGNPHCWVPHSCKLTSKEVPGETINLQTCVRCPNNYPW 524

Query: 448 LNDPTGDGHY 419
           +NDPTGDG +
Sbjct: 525 VNDPTGDGFF 534



 Score = 90.2 bits (214), Expect = 4e-20
 Identities = 47/87 (54%), Positives = 52/87 (59%)
 Frame = -2

Query: 917 EXXXREAPTNGEILAGCAMVTQLXXS*QEINSTNFLXPQX*PPL*AKSCSHSGLYFHAAW 738
           E   RE PTN E L GCAMV             NFL          ++ +  GLYFHAAW
Sbjct: 370 ELDRREDPTNDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHY-EENRAPLGLYFHAAW 428

Query: 737 LKNXPEFLEAFLYWIDEILQNHNDVYF 657
           LKN PEFL+AFLYW+DEIL NHNDVYF
Sbjct: 429 LKNNPEFLDAFLYWVDEILANHNDVYF 455



 Score = 36.7 bits (81), Expect = 5e-04
 Identities = 38/135 (28%), Positives = 48/135 (35%), Gaps = 4/135 (2%)
 Frame = -1

Query: 1095 GGXPQFRXRXXGXFXXSIFXXXXLSPP*AGXXVL--RMPQXXPGNCKXCPXKXHAVWKG- 925
            GG  QF       F         LS P      +  RMP    GN + CP + HAVW+  
Sbjct: 308  GGNNQFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQSCPTRSHAVWEMV 367

Query: 924  -SX*VXXS*GPHQRRNPGRVRYGDSALXXLTGDQFYKLPXPPXLTAIMSKIVLPLGPLFP 748
             +         +    PG     DS    LTGDQFY             +   PLG  F 
Sbjct: 368  LNELDRREDPTNDEYLPGCAMV-DSCSNILTGDQFYNF-LNHNFDRHYEENRAPLGLYFH 425

Query: 747  CRMVEKXP*ILRSFL 703
               ++  P  L +FL
Sbjct: 426  AAWLKNNPEFLDAFL 440


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score =  114 bits (275), Expect = 1e-27
 Identities = 57/128 (44%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
 Frame = -3

Query: 799 FDRHYEQNRAPTRASISMPHG*KIXLNS*KLSCTGLMKFYKIITM---YISVTMTQVIQW 629
           F+RH   NRAP        H     L S K     L+KF + +        VT  QVIQW
Sbjct: 401 FNRHLNSNRAPLGL-----HFHASWLKSKKEFKEELIKFIEEMLQRNDVYFVTNLQVIQW 455

Query: 628 IQNPRTITEAKNFEPWREKCAVEGIPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPW 449
           +QNP  +   ++F+ W+EKC ++G P C +P+SC LT++E+PGET+ L TC+ CP NYPW
Sbjct: 456 MQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPW 515

Query: 448 LNDPTGDG 425
           + DPTGDG
Sbjct: 516 ILDPTGDG 523



 Score = 29.9 bits (64), Expect = 0.052
 Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
 Frame = -1

Query: 1095 GGXPQFRXRXXGXFX--XSIFXXXXLSPP*AGXXVLRMPQXXPGNCKXCPXKXHAVWK 928
            GG  QF       F    SI       P        RMP    GN   CP + H VW+
Sbjct: 300  GGNKQFEMMADQFFVYDASITASLGRVPIWPYTLYFRMPHKCNGNAHNCPSRSHPVWE 357


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score =  113 bits (271), Expect = 4e-27
 Identities = 56/128 (43%), Positives = 77/128 (60%), Gaps = 3/128 (2%)
 Frame = -3

Query: 799 FDRHYEQNRAPTRASISMPHG*KIXLNS*KLSCTGLMKFYKIITM---YISVTMTQVIQW 629
           F+RH   NRAP        H     L S K     L+KF + +        VT  QVIQW
Sbjct: 408 FNRHLNSNRAPLGL-----HFHASWLKSKKEFKEELIKFIEEMLQRNDVYFVTNLQVIQW 462

Query: 628 IQNPRTITEAKNFEPWREKCAVEGIPACWVPHSCKLTSKEVPGETINLQTCLRCPVNYPW 449
           +QNP  +   ++F+ W+EKC ++G P C +P+SC LT++E+PGET+ L TC+ CP NYPW
Sbjct: 463 MQNPTELNGLRDFQEWKEKCDIKGQPYCSLPNSCALTTRELPGETLRLFTCMECPNNYPW 522

Query: 448 LNDPTGDG 425
           + +PTGDG
Sbjct: 523 ILEPTGDG 530



 Score = 29.9 bits (64), Expect = 0.052
 Identities = 18/58 (31%), Positives = 20/58 (34%), Gaps = 2/58 (3%)
 Frame = -1

Query: 1095 GGXPQFRXRXXGXFX--XSIFXXXXLSPP*AGXXVLRMPQXXPGNCKXCPXKXHAVWK 928
            GG  QF       F    SI       P        RMP    GN   CP + H VW+
Sbjct: 307  GGNKQFEMMADQFFVYDASITASLGRVPIWPYTLYFRMPHKCNGNAHNCPSRSHPVWE 364


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 273,897
Number of Sequences: 336
Number of extensions: 5404
Number of successful extensions: 28
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46296100
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)