Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_C11_e371_05.seq
(1545 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to endonuclea... 40 0.13
UniRef50_UPI0000F1F21F Cluster: PREDICTED: hypothetical protein;... 40 0.23
UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to endonuclea... 39 0.31
UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to endonuclea... 39 0.40
UniRef50_A0CZ14 Cluster: Chromosome undetermined scaffold_31, wh... 38 0.53
UniRef50_UPI0000F217CE Cluster: PREDICTED: hypothetical protein;... 38 0.71
UniRef50_UPI0000E4A747 Cluster: PREDICTED: similar to endonuclea... 37 1.2
UniRef50_Q7JP75 Cluster: Cytokinesis defect protein 1, isoform b... 37 1.6
UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=... 36 2.2
UniRef50_UPI00004D7E7F Cluster: CDNA FLJ45135 fis, clone BRAWH30... 36 3.8
UniRef50_A7DBQ1 Cluster: RNA-binding S4 domain protein; n=3; Alp... 35 5.0
UniRef50_A2F502 Cluster: Formin Homology 2 Domain containing pro... 35 5.0
UniRef50_Q1DAN5 Cluster: Putative serine/threonine protein kinas... 35 6.6
UniRef50_Q4Q7A5 Cluster: Putative uncharacterized protein; n=3; ... 35 6.6
UniRef50_A2YNB7 Cluster: Putative uncharacterized protein; n=1; ... 34 8.7
>UniRef50_UPI0000E490F6 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=5;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 1030
Score = 40.3 bits (90), Expect = 0.13
Identities = 16/66 (24%), Positives = 36/66 (54%)
Frame = +1
Query: 691 FEALPSFMCRQNVSKKSRLSVHPGVLVRTLMYGSECWVWQKNHESXINAVVMTGLRSIAG 870
F+ L + +++S +++ ++ +++ L+YG+E W +K + + M LR I G
Sbjct: 857 FQRLNNIWTSKSISSHTKMQLYQSLILSILLYGAESWTVKKEDSNRLQVFEMACLRRIMG 916
Query: 871 MRLIDK 888
+ +DK
Sbjct: 917 VTRLDK 922
>UniRef50_UPI0000F1F21F Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 1022
Score = 39.5 bits (88), Expect = 0.23
Identities = 19/56 (33%), Positives = 32/56 (57%)
Frame = +1
Query: 721 QNVSKKSRLSVHPGVLVRTLMYGSECWVWQKNHESXINAVVMTGLRSIAGMRLIDK 888
+ +S+K++LS + V + TL G + W + S I A ++ LR +AG LID+
Sbjct: 8 KELSRKAKLSSYQSVYIPTLTNGHDLWARTERTRSQIKAAKISFLRRVAGRTLIDR 63
>UniRef50_UPI0000E48520 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 958
Score = 39.1 bits (87), Expect = 0.31
Identities = 17/66 (25%), Positives = 36/66 (54%)
Frame = +1
Query: 691 FEALPSFMCRQNVSKKSRLSVHPGVLVRTLMYGSECWVWQKNHESXINAVVMTGLRSIAG 870
F+AL Q++ +++ ++ +++ L+YG+E W +K E+ ++ M LR I G
Sbjct: 770 FQALKKIWASQDIRCSTKVDLYKVLVLSILLYGAETWTLKKVDENRLHTFEMACLRRIMG 829
Query: 871 MRLIDK 888
+ D+
Sbjct: 830 VTRFDR 835
>UniRef50_UPI0000E4958A Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase, partial; n=7;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase, partial -
Strongylocentrotus purpuratus
Length = 787
Score = 38.7 bits (86), Expect = 0.40
Identities = 15/56 (26%), Positives = 33/56 (58%)
Frame = +1
Query: 721 QNVSKKSRLSVHPGVLVRTLMYGSECWVWQKNHESXINAVVMTGLRSIAGMRLIDK 888
Q++S+ ++ ++ +++ YG+E W +K+ + + M LR+I G+ L+DK
Sbjct: 367 QDISRSLKVRIYRALILPIATYGAESWTLRKSDRNKLEVFEMRCLRTILGVHLMDK 422
>UniRef50_A0CZ14 Cluster: Chromosome undetermined scaffold_31, whole
genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_31, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 417
Score = 38.3 bits (85), Expect = 0.53
Identities = 20/50 (40%), Positives = 21/50 (42%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPPXVRDLPQLFXXVXPGXXRPLGXP 1039
PP GG PPP PP F P PP +P PG RP G P
Sbjct: 362 PPLPGGARPPPPPPPPFGNAPPPPPPPPGSKIPG--PPPPPGGPRPPGPP 409
>UniRef50_UPI0000F217CE Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 654
Score = 37.9 bits (84), Expect = 0.71
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +1
Query: 721 QNVSKKSRLSVHPGVLVRTLMYGSECWVWQKNHESXINAVVMTGLRSIAGMRLID 885
+ +S+K++ S++ + V TL YG E WV + I ++ L +AG LID
Sbjct: 520 EELSRKAKFSIYRSIYVTTLTYGHELWVKTERTIFRIQVAEVSFLHRMAGSTLID 574
>UniRef50_UPI0000E4A747 Cluster: PREDICTED: similar to
endonuclease-reverse transcriptase; n=2;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
endonuclease-reverse transcriptase - Strongylocentrotus
purpuratus
Length = 555
Score = 37.1 bits (82), Expect = 1.2
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +1
Query: 724 NVSKKSRLSVHPGVLVRTLMYGSECWVWQKNHESXINAVVMTGLRSIAGMRLIDK 888
+VS + + ++ +++ TL+YG+E W K+ ++A +M LR+I + DK
Sbjct: 407 HVSTRVKCKIYRAIVLSTLLYGAESWTLYKSQVKKLHAFMMRHLRAIMRISWKDK 461
>UniRef50_Q7JP75 Cluster: Cytokinesis defect protein 1, isoform b;
n=6; cellular organisms|Rep: Cytokinesis defect protein
1, isoform b - Caenorhabditis elegans
Length = 1437
Score = 36.7 bits (81), Expect = 1.6
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPP 1108
PPP GG PPP PP F P PP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>UniRef50_Q1AKH8 Cluster: Reverse transcriptase family member; n=6;
Papilionoideae|Rep: Reverse transcriptase family member
- Glycine max (Soybean)
Length = 377
Score = 36.3 bits (80), Expect = 2.2
Identities = 17/59 (28%), Positives = 28/59 (47%)
Frame = +1
Query: 712 MCRQNVSKKSRLSVHPGVLVRTLMYGSECWVWQKNHESXINAVVMTGLRSIAGMRLIDK 888
+C V K + + + T++YG+ECW + HE+ + M LR + G DK
Sbjct: 224 LCDAKVPIKLKGKFYRTAVRPTILYGTECWAVKSQHENKVGVAEMRMLRWMCGKTRQDK 282
>UniRef50_UPI00004D7E7F Cluster: CDNA FLJ45135 fis, clone
BRAWH3038252, highly similar to Formin 1 isoform IV.;
n=4; Xenopus tropicalis|Rep: CDNA FLJ45135 fis, clone
BRAWH3038252, highly similar to Formin 1 isoform IV. -
Xenopus tropicalis
Length = 1182
Score = 35.5 bits (78), Expect = 3.8
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPPXVRDLPQLF 1081
PPP G PPP PP + S PP LP LF
Sbjct: 693 PPPFPGGGPPPPPPPFPGYGSSAVPPPLPLPLPGLF 728
>UniRef50_A7DBQ1 Cluster: RNA-binding S4 domain protein; n=3;
Alphaproteobacteria|Rep: RNA-binding S4 domain protein -
Methylobacterium extorquens PA1
Length = 669
Score = 35.1 bits (77), Expect = 5.0
Identities = 23/60 (38%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 1013 RAXXPGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXP-PXGGG 1189
R G G PRG PG + G+ GG G + GGR GGG P P GGG
Sbjct: 604 RGDFKGGAKGGPRGDFKPGG-GGRPGGRP---GGRPGGKPGGAPGGRPGGGGKPAPRGGG 659
>UniRef50_A2F502 Cluster: Formin Homology 2 Domain containing protein;
n=2; Trichomonas vaginalis G3|Rep: Formin Homology 2
Domain containing protein - Trichomonas vaginalis G3
Length = 1139
Score = 35.1 bits (77), Expect = 5.0
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 1/65 (1%)
Frame = -1
Query: 1218 GXFLIXXXQXPPPXG-GXXPPPXRPPXFAFXSXPXXPPXVRDLPQLFXXVXPGXXRPLGX 1042
G L+ PPP G PPP PP A P PP +P V PG P G
Sbjct: 595 GASLVPPPPPPPPGAAGLVPPPPPPPPGAGGIPPPPPPPGAGIPPPPPGV-PGIPPPPGA 653
Query: 1041 PXXXP 1027
P P
Sbjct: 654 PGLPP 658
>UniRef50_Q1DAN5 Cluster: Putative serine/threonine protein kinase;
n=1; Myxococcus xanthus DK 1622|Rep: Putative
serine/threonine protein kinase - Myxococcus xanthus
(strain DK 1622)
Length = 569
Score = 34.7 bits (76), Expect = 6.6
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +1
Query: 733 KKSRLSVHPGVLVRTLMYGSECWVWQKNHESXINAVVMTGLRSIAGMRLID 885
++SRL G+L+ L+ G+ W+W + I + TGLR A M ID
Sbjct: 458 RRSRLKRALGLLLVALLVGTGIWLWPQRSTLLIRVMSATGLRLSAPMLRID 508
>UniRef50_Q4Q7A5 Cluster: Putative uncharacterized protein; n=3;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 1024
Score = 34.7 bits (76), Expect = 6.6
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPP 1108
PPP PPP PP F+F + P PP
Sbjct: 180 PPPPPPPPPPPPPPPSFSFTATPPLPP 206
>UniRef50_A2YNB7 Cluster: Putative uncharacterized protein; n=1; Oryza
sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 444
Score = 34.3 bits (75), Expect = 8.7
Identities = 20/58 (34%), Positives = 23/58 (39%)
Frame = +2
Query: 1016 AXXPGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPPXGGG 1189
A PG G GR G G++ GG G +A GG GGG GGG
Sbjct: 158 ARPPGGGRGGALGRPPGGGGGGGGPGRAPGGGGGGGGPGRAPGGGGGGGGPGGGGGGG 215
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 987,879,575
Number of Sequences: 1657284
Number of extensions: 17426941
Number of successful extensions: 46669
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 35373
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43183
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 165344584750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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