Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_C11_e371_05.seq
(1545 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK126537-1|BAC86582.1| 467|Homo sapiens protein ( Homo sapiens ... 34 1.6
AK124073-1|BAC85767.1| 536|Homo sapiens protein ( Homo sapiens ... 34 1.6
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 33 2.1
Z14000-1|CAA78389.1| 377|Homo sapiens RING1 protein. 33 2.8
BT007352-1|AAP36016.1| 377|Homo sapiens ring finger protein 1 p... 33 2.8
BC051866-1|AAH51866.1| 406|Homo sapiens ring finger protein 1 p... 33 2.8
BC002922-1|AAH02922.2| 406|Homo sapiens ring finger protein 1 p... 33 2.8
AL844527-13|CAI41841.1| 406|Homo sapiens ring finger protein 1 ... 33 2.8
AL713971-1|CAI17650.1| 406|Homo sapiens ring finger protein 1 p... 33 2.8
AL645940-11|CAI18069.1| 406|Homo sapiens ring finger protein 1 ... 33 2.8
AL031228-9|CAI95620.1| 406|Homo sapiens ring finger protein 1 p... 33 2.8
AL031228-8|CAA20235.1| 377|Homo sapiens ring finger protein 1 p... 33 2.8
AB061793-1|BAB84554.1| 197|Homo sapiens MOB-LAK protein. 32 6.5
BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein. 31 8.6
AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein. 31 8.6
>AK126537-1|BAC86582.1| 467|Homo sapiens protein ( Homo sapiens
cDNA FLJ44573 fis, clone UTERU3016789, moderately
similar to SH3 domain-binding protein 3BP-2. ).
Length = 467
Score = 33.9 bits (74), Expect = 1.6
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 701 CLALCADRMCLKSHVCLYIRVC*SVRLCMVVS 796
C ++CA +CL ++ C+++ VC +R+CM VS
Sbjct: 34 CQSMCAC-VCLSAYPCVHVCVCQRIRVCMCVS 64
>AK124073-1|BAC85767.1| 536|Homo sapiens protein ( Homo sapiens
cDNA FLJ42079 fis, clone SYNOV2021320, highly similar
to SH3 DOMAIN-BINDING PROTEIN 3BP-2. ).
Length = 536
Score = 33.9 bits (74), Expect = 1.6
Identities = 13/32 (40%), Positives = 23/32 (71%)
Frame = +2
Query: 701 CLALCADRMCLKSHVCLYIRVC*SVRLCMVVS 796
C ++CA +CL ++ C+++ VC +R+CM VS
Sbjct: 34 CQSMCAC-VCLSAYPCVHVCVCQRIRVCMCVS 64
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 33.5 bits (73), Expect = 2.1
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +2
Query: 689 CLRPCLALCADRMCLKSHVCLYIRVC*SVRLCMVVS 796
C+ C+ +C MC+ VC+Y+ +C V +C+ VS
Sbjct: 52 CICVCVCVCVS-MCVSISVCVYLCLCVCVSVCVYVS 86
Score = 32.3 bits (70), Expect = 4.9
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +2
Query: 701 CLALCADRMCLKSHVCLYIRVC*SVRLCMVV 793
CL+LC +C++ VCL +RVC V LC+ V
Sbjct: 138 CLSLC---VCIRVSVCLSLRVCVCVCLCVSV 165
>Z14000-1|CAA78389.1| 377|Homo sapiens RING1 protein.
Length = 377
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1025 PGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPP 1177
PG PRG G + G + GG G E GG GGG P
Sbjct: 167 PGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGP 217
>BT007352-1|AAP36016.1| 377|Homo sapiens ring finger protein 1
protein.
Length = 377
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1025 PGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPP 1177
PG PRG G + G + GG G E GG GGG P
Sbjct: 167 PGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGP 217
>BC051866-1|AAH51866.1| 406|Homo sapiens ring finger protein 1
protein.
Length = 406
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1025 PGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPP 1177
PG PRG G + G + GG G E GG GGG P
Sbjct: 196 PGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGP 246
>BC002922-1|AAH02922.2| 406|Homo sapiens ring finger protein 1
protein.
Length = 406
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1025 PGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPP 1177
PG PRG G + G + GG G E GG GGG P
Sbjct: 196 PGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGP 246
>AL844527-13|CAI41841.1| 406|Homo sapiens ring finger protein 1
protein.
Length = 406
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1025 PGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPP 1177
PG PRG G + G + GG G E GG GGG P
Sbjct: 196 PGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGP 246
>AL713971-1|CAI17650.1| 406|Homo sapiens ring finger protein 1
protein.
Length = 406
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1025 PGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPP 1177
PG PRG G + G + GG G E GG GGG P
Sbjct: 196 PGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGP 246
>AL645940-11|CAI18069.1| 406|Homo sapiens ring finger protein 1
protein.
Length = 406
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1025 PGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPP 1177
PG PRG G + G + GG G E GG GGG P
Sbjct: 196 PGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGP 246
>AL031228-9|CAI95620.1| 406|Homo sapiens ring finger protein 1
protein.
Length = 406
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1025 PGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPP 1177
PG PRG G + G + GG G E GG GGG P
Sbjct: 196 PGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGP 246
>AL031228-8|CAA20235.1| 377|Homo sapiens ring finger protein 1
protein.
Length = 377
Score = 33.1 bits (72), Expect = 2.8
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +2
Query: 1025 PGXXXGXPRGRXXPGXTXXKSWGKSRTXGGXXGXEXKAKXGGRXGGGXXPP 1177
PG PRG G + G + GG G E GG GGG P
Sbjct: 167 PGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGTLGP 217
>AB061793-1|BAB84554.1| 197|Homo sapiens MOB-LAK protein.
Length = 197
Score = 31.9 bits (69), Expect = 6.5
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +1
Query: 724 NVSKKSRLSVHPGVLVRTLMYGSECWV----WQKNH 819
NV++ R+S+ PGVL R + +CW W +NH
Sbjct: 139 NVAENDRISIRPGVLRRGDKHPCQCWAQCSQWFQNH 174
>BC044636-1|AAH44636.1| 520|Homo sapiens YLPM1 protein protein.
Length = 520
Score = 31.5 bits (68), Expect = 8.6
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPPXVRDLPQLFXXVXPGXXRPLGXPXXXP 1027
PP PPP PP PP V LP L P P G P P
Sbjct: 421 PPSLSSAGPPPVLPPP---SLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIP 471
>AK090435-1|BAC03416.1| 1766|Homo sapiens FLJ00353 protein protein.
Length = 1766
Score = 31.5 bits (68), Expect = 8.6
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPPXVRDLPQLFXXVXPGXXRPLGXPXXXP 1027
PP PPP PP PP V LP L P P G P P
Sbjct: 219 PPSLSSAGPPPVLPPP---SLSSTAPPPVMPLPPLSSATPPPGIPPPGVPQGIP 269
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,113,594
Number of Sequences: 237096
Number of extensions: 2942611
Number of successful extensions: 8159
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5914
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7682
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 23074645414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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