Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_C11_e371_05.seq
(1545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 34 0.31
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 34 0.31
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 34 0.31
Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical pr... 33 0.72
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 6.7
U42438-7|AAN84875.1| 201|Caenorhabditis elegans Hypothetical pr... 29 6.7
U42438-6|AAM75370.1| 314|Caenorhabditis elegans Hypothetical pr... 29 6.7
U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical pr... 29 6.7
U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical pr... 29 6.7
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 29 6.7
Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical pr... 29 8.8
Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical pr... 29 8.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.9 bits (74), Expect = 0.31
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPP 1108
PPP GG PPP PP F P PP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.9 bits (74), Expect = 0.31
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPP 1108
PPP GG PPP PP F P PP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.9 bits (74), Expect = 0.31
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPP 1108
PPP GG PPP PP F P PP
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPP 371
>Z93378-4|CAE17803.1| 514|Caenorhabditis elegans Hypothetical protein
F19H8.5 protein.
Length = 514
Score = 32.7 bits (71), Expect = 0.72
Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = -2
Query: 1052 PWAXLPAXXVPXPXXLLGEILXPPXXXPKLIRXPFPNWNYILYPXXTVPYXTIP-XLSIN 876
PW PA VP P L +L P P L+ PF Y+L P PY P LS
Sbjct: 396 PWIFSPA--VPLPFILSPYLLSPYIFSP-LVMAPFILNPYVLSPNIFNPYVLSPLVLSPL 452
Query: 875 LMPAILLXPVITTALIXLSWFFCQTQHSLPYISVRTSTP 759
+ + P++ +I F S YI +P
Sbjct: 453 FLCPDVFSPMVLGGVILSPNSFSPAVFSKSYIMATVLSP 491
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 29.5 bits (63), Expect = 6.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPPXVRDLP 1090
PPP G PPP PP FA P PP + +P
Sbjct: 76 PPPGPGGIPPP--PPMFA-GGIPPPPPMMGGIP 105
>U42438-7|AAN84875.1| 201|Caenorhabditis elegans Hypothetical
protein C09G4.2d protein.
Length = 201
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +1
Query: 646 PRKVRRKCHDFITTLFEALPSFMCRQNVSKKSRLSVHPGVLVRTLMYGSECWVWQK 813
P V K HD ++ AL FMC S P V ++ G E W W +
Sbjct: 59 PEIVLNKGHDLSVDIW-ALGIFMCELLTGSPPFSSTDPMVTYNAILKGLEKWAWPR 113
>U42438-6|AAM75370.1| 314|Caenorhabditis elegans Hypothetical
protein C09G4.2b protein.
Length = 314
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +1
Query: 646 PRKVRRKCHDFITTLFEALPSFMCRQNVSKKSRLSVHPGVLVRTLMYGSECWVWQK 813
P V K HD ++ AL FMC S P V ++ G E W W +
Sbjct: 172 PEIVLNKGHDLSVDIW-ALGIFMCELLTGSPPFSSTDPMVTYNAILKGLEKWAWPR 226
>U42438-5|AAM75369.1| 581|Caenorhabditis elegans Hypothetical
protein C09G4.2a protein.
Length = 581
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +1
Query: 646 PRKVRRKCHDFITTLFEALPSFMCRQNVSKKSRLSVHPGVLVRTLMYGSECWVWQK 813
P V K HD ++ AL FMC S P V ++ G E W W +
Sbjct: 439 PEIVLNKGHDLSVDIW-ALGIFMCELLTGSPPFSSTDPMVTYNAILKGLEKWAWPR 493
>U42438-4|AAM75371.1| 617|Caenorhabditis elegans Hypothetical
protein C09G4.2c protein.
Length = 617
Score = 29.5 bits (63), Expect = 6.7
Identities = 17/56 (30%), Positives = 22/56 (39%)
Frame = +1
Query: 646 PRKVRRKCHDFITTLFEALPSFMCRQNVSKKSRLSVHPGVLVRTLMYGSECWVWQK 813
P V K HD ++ AL FMC S P V ++ G E W W +
Sbjct: 475 PEIVLNKGHDLSVDIW-ALGIFMCELLTGSPPFSSTDPMVTYNAILKGLEKWAWPR 529
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 29.5 bits (63), Expect = 6.7
Identities = 18/57 (31%), Positives = 20/57 (35%)
Frame = -1
Query: 1194 QXPPPXGGXXPPPXRPPXFAFXSXPXXPPXVRDLPQLFXXVXPGXXRPLGXPXXXPG 1024
Q P P PP PP F + PP P + PG P G P PG
Sbjct: 401 QYPGPMHYPGMPPMMPPGAPFSAGASYPPMGGPFPPNPYGMHPGMT-PGGYPMSAPG 456
>Z69360-4|CAC42291.2| 732|Caenorhabditis elegans Hypothetical protein
F25H8.5c protein.
Length = 732
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPPXVRDLP 1090
PPP PPP PP P PP R P
Sbjct: 95 PPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQP 127
>Z69360-3|CAA93286.2| 369|Caenorhabditis elegans Hypothetical protein
F25H8.5b protein.
Length = 369
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPPXVRDLP 1090
PPP PPP PP P PP R P
Sbjct: 95 PPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQP 127
>Z69360-2|CAA93285.2| 780|Caenorhabditis elegans Hypothetical protein
F25H8.5a protein.
Length = 780
Score = 29.1 bits (62), Expect = 8.8
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -1
Query: 1188 PPPXGGXXPPPXRPPXFAFXSXPXXPPXVRDLP 1090
PPP PPP PP P PP R P
Sbjct: 95 PPPRNNCLPPPGPPPPCQQYQQPQPPPCQRPQP 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,555,668
Number of Sequences: 27780
Number of extensions: 461939
Number of successful extensions: 1330
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4452547242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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