Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_C10_e363_06.seq
         (1502 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   1.1  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   5.9  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   7.8  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   7.8  

>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +2

Query: 431 SDLLKNMCPLYYYLFHFLLISFIIVIQ 511
           S+++ +MC LYY L   L++++ + ++
Sbjct: 161 SNIINDMCSLYYILQITLIVNYALALK 187


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +2

Query: 428 TSDLLKNMCPLYYYLFHFLL-ISFIIVIQYGPFLVYV 535
           T  LL  +C  Y+Y  H L   +FII   +  FL+ +
Sbjct: 249 TVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCI 285


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 473  FHFLLI-SFIIVIQYGPFLVYVRGVFKKVL*TSRL*FSL 586
            F FL+  + ++VIQ+   +++  G F +++  ++L F L
Sbjct: 1285 FVFLIFFALLMVIQFFAMMIHRFGTFSQIITKTQLDFDL 1323


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 11/39 (28%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +2

Query: 473  FHFLLI-SFIIVIQYGPFLVYVRGVFKKVL*TSRL*FSL 586
            F FL+  + ++VIQ+   +++  G F +++  ++L F L
Sbjct: 1285 FVFLIFFALLMVIQFFAMMIHRFGTFSQIITKTQLDFDL 1323


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 270,003
Number of Sequences: 336
Number of extensions: 5386
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 45067000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)