Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_C10_e363_06.seq
         (1502 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   9.9  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   9.9  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   9.9  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +1

Query: 1432 PPPPXGXGXXXPPXXXPXP 1488
            PPPP G     PP   P P
Sbjct: 533  PPPPGGAVLNIPPQFLPPP 551


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = +2

Query: 38  TSGIPRAAG---NSARGFKEISRVSL 106
           TSG PRAAG   NS R  K++ R  L
Sbjct: 65  TSGEPRAAGSSSNSRRNSKQLQRDEL 90


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.2 bits (50), Expect = 9.9
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 3/26 (11%)
 Frame = +2

Query: 38  TSGIPRAAG---NSARGFKEISRVSL 106
           TSG PRAAG   NS R  K++ R  L
Sbjct: 65  TSGEPRAAGSSSNSRRNSKQLQRDEL 90


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,156,745
Number of Sequences: 2352
Number of extensions: 21234
Number of successful extensions: 94
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 92
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 175969035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)