Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_C10_e363_06.seq
(1502 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 40 0.003
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 36 0.075
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 36 0.075
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 36 0.075
AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen prot... 35 0.17
Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical pr... 34 0.23
U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protei... 33 0.70
AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular col... 33 0.70
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 32 1.2
Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical pr... 32 1.2
U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protei... 32 1.2
U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protei... 32 1.2
U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protei... 32 1.2
U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protei... 32 1.2
U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protei... 32 1.2
U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protei... 32 1.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 32 1.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 32 1.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 32 1.2
Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical pr... 31 1.6
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 31 2.1
Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical pr... 31 2.1
AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical ... 31 2.1
AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen prot... 31 2.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 2.8
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 2.8
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 31 2.8
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 2.8
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 2.8
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 31 2.8
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 30 4.9
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 4.9
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 4.9
U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protei... 30 4.9
L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen... 30 4.9
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 4.9
Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical pr... 29 6.5
U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helica... 29 6.5
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 29 6.5
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 29 6.5
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 29 6.5
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 8.6
M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein. 29 8.6
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 8.6
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 8.6
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 40.3 bits (90), Expect = 0.003
Identities = 29/100 (29%), Positives = 29/100 (29%), Gaps = 2/100 (2%)
Frame = +3
Query: 1173 GTRXPXXXAXPSXGKXGPPPPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXG 1352
G P PS G PPP P A P G P GP G
Sbjct: 349 GAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQGPGGPGG 408
Query: 1353 TXGXPPPXXGXXXPAXXXP--XXKGXXXPPPPXXXGPXXP 1466
PPP G P P G PPPP G P
Sbjct: 409 Y--GPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGP 446
Score = 30.7 bits (66), Expect = 2.8
Identities = 34/121 (28%), Positives = 36/121 (29%), Gaps = 2/121 (1%)
Frame = +1
Query: 1114 RGGPXXPPXGXXXRPGSXGXEPGXXXXXXPLPGXXKAPX--XPXPXGGXXXXXTRXXNPF 1287
+GGP P P P P P AP P P G + F
Sbjct: 340 QGGP--PQGSFGAPPPQQFHAPSPQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAF 397
Query: 1288 XXPXDP*KXXGGXXXTXTAPXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXP 1467
P P GG P P G P G P P G PPPP G G P
Sbjct: 398 GAPQGP----GGPGGYGPPP--PGG--PGAPGSYGPPQGGP---GGFGPPPPGGPGAYGP 446
Query: 1468 P 1470
P
Sbjct: 447 P 447
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical protein
F23H12.4 protein.
Length = 301
Score = 35.9 bits (79), Expect = 0.075
Identities = 28/86 (32%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Frame = +3
Query: 1212 GKXGPP-PPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXX 1388
G GPP PP G P P A RG P GP G G P P
Sbjct: 153 GPPGPPGPPGAPGDPGEAGTPG-RPGTDAAPGSPGPRGPP----GPAGEAGAPGPAGEPG 207
Query: 1389 XPAXXXPXXKGXXXPPPPXXXGPXXP 1466
PA P G P P GP P
Sbjct: 208 TPAISEPLTPG--APGEPGDSGPPGP 231
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 35.9 bits (79), Expect = 0.075
Identities = 28/86 (32%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Frame = +3
Query: 1212 GKXGPP-PPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXX 1388
G GPP PP G P P A RG P GP G G P P
Sbjct: 148 GPPGPPGPPGAPGDPGEAGTPG-RPGTDAAPGSPGPRGPP----GPAGEAGAPGPAGEPG 202
Query: 1389 XPAXXXPXXKGXXXPPPPXXXGPXXP 1466
PA P G P P GP P
Sbjct: 203 TPAISEPLTPG--APGEPGDSGPPGP 226
Score = 29.1 bits (62), Expect = 8.6
Identities = 29/103 (28%), Positives = 31/103 (30%), Gaps = 2/103 (1%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXXGXPFXGXXRPPXXPXPXXXXXXXEPEXXTXXPGRGTXKKXXGXXX 1330
PG G+PG P G P EP PG G
Sbjct: 171 PGTDAAPGSPGPRGPPGP-AGEAGAPGPAGEPGTPAISEP-LTPGAPGEPGDSGPPGPPG 228
Query: 1331 XPXRPXGNXGGPXPXXGGXXPGPXX-PXXERAXXPP-PPXXXG 1453
P P GN G P P PGP P + PP PP G
Sbjct: 229 PPGAP-GNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAG 270
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 1 (col-1) gene, complete cds. ).
Length = 296
Score = 35.9 bits (79), Expect = 0.075
Identities = 28/86 (32%), Positives = 28/86 (32%), Gaps = 1/86 (1%)
Frame = +3
Query: 1212 GKXGPP-PPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXX 1388
G GPP PP G P P A RG P GP G G P P
Sbjct: 148 GPPGPPGPPGAPGDPGEAGTPG-RPGTDAAPGSPGPRGPP----GPAGEAGAPGPAGEPG 202
Query: 1389 XPAXXXPXXKGXXXPPPPXXXGPXXP 1466
PA P G P P GP P
Sbjct: 203 TPAISEPLTPG--APGEPGDSGPPGP 226
Score = 29.1 bits (62), Expect = 8.6
Identities = 29/103 (28%), Positives = 31/103 (30%), Gaps = 2/103 (1%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXXGXPFXGXXRPPXXPXPXXXXXXXEPEXXTXXPGRGTXKKXXGXXX 1330
PG G+PG P G P EP PG G
Sbjct: 171 PGTDAAPGSPGPRGPPGP-AGEAGAPGPAGEPGTPAISEP-LTPGAPGEPGDSGPPGPPG 228
Query: 1331 XPXRPXGNXGGPXPXXGGXXPGPXX-PXXERAXXPP-PPXXXG 1453
P P GN G P P PGP P + PP PP G
Sbjct: 229 PPGAP-GNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAG 270
>AF045646-2|AAK29827.1| 371|Caenorhabditis elegans Collagen protein
103 protein.
Length = 371
Score = 34.7 bits (76), Expect = 0.17
Identities = 31/110 (28%), Positives = 33/110 (30%), Gaps = 9/110 (8%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXX-GXP-FXGXXRPPXXPXPXXXXXXXEPEXXTXXPGR-------GT 1303
PG G PG G P F G P P P PGR G+
Sbjct: 193 PGPAGQAGRPGNDGQPGAPSFGGGVGAPGAPGPAGDAGSPGQPGAPGQPGRPGKNAQGGS 252
Query: 1304 XKKXXGXXXXPXRPXGNXGGPXPXXGGXXPGPXXPXXERAXXPPPPXXXG 1453
+ P P GN G P G PGP P R P P G
Sbjct: 253 SRPGPPGPAGPPGPPGNNGAPGGGYGVGPPGPPGPSG-RPGAPGQPGPDG 301
>Z79694-1|CAB01959.1| 303|Caenorhabditis elegans Hypothetical protein
C15A11.1 protein.
Length = 303
Score = 34.3 bits (75), Expect = 0.23
Identities = 24/93 (25%), Positives = 25/93 (26%), Gaps = 3/93 (3%)
Frame = +3
Query: 1221 GPPPPXXXGXXXXXXNPXLXPXXX--AXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXXXP 1394
GPP P P P A GP + P GP G G P P
Sbjct: 115 GPPGPPGPDGNAGPEGPSGAPGADGDAAGPGEAGPAGPAGPPGPDGQPGAPGPNGQPGAA 174
Query: 1395 AXXXPXXKGXXXPP-PPXXXGPXXPXXXXPXXP 1490
G P PP GP P P
Sbjct: 175 GTTSTNEPGSPGPAGPPGPAGPAGEDAAAPESP 207
>U53333-2|AAA96155.1| 299|Caenorhabditis elegans Collagen protein 34
protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.70
Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
Frame = +3
Query: 1212 GKXGPP-PPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXX 1388
G GPP PP G +P L P A +G P GP G G P
Sbjct: 151 GPPGPPGPPGPPGDSGEPGSPGL-PGQDAAPGEPGPKGPP----GPPGAPGAPGTPGEPG 205
Query: 1389 XPAXXXPXXKGXXXPPPPXXXGPXXP 1466
PA P G P PP GP P
Sbjct: 206 VPAQSEPLIPG--EPGPPGEAGPQGP 229
>AF410845-1|AAL76233.1| 299|Caenorhabditis elegans cuticular collagen
RAM-4 protein.
Length = 299
Score = 32.7 bits (71), Expect = 0.70
Identities = 28/86 (32%), Positives = 30/86 (34%), Gaps = 1/86 (1%)
Frame = +3
Query: 1212 GKXGPP-PPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXX 1388
G GPP PP G +P L P A +G P GP G G P
Sbjct: 151 GPPGPPGPPGPPGDSGEPGSPGL-PGQDAAPGEPGPKGPP----GPPGAPGAPGTPGEPG 205
Query: 1389 XPAXXXPXXKGXXXPPPPXXXGPXXP 1466
PA P G P PP GP P
Sbjct: 206 VPAQSEPLIPG--EPGPPGEAGPQGP 229
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +2
Query: 1154 GRVXXGGNPGXXX-XGXPF-XGXXRPPXXPXPXXXXXXXEPEXXTXXPG-RGTXKKXXGX 1324
G GNPG G P G PP P P + PG R
Sbjct: 116 GPAGPAGNPGADGDAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAG 175
Query: 1325 XXXPXRPXGNXGGPXPXXGGXXPGPXXP 1408
P P G G P GG PGP P
Sbjct: 176 PAGPPGPPGPDGAPG---GGSGPGPAGP 200
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical protein
ZK863.2 protein.
Length = 330
Score = 31.9 bits (69), Expect = 1.2
Identities = 26/88 (29%), Positives = 27/88 (30%), Gaps = 3/88 (3%)
Frame = +2
Query: 1154 GRVXXGGNPGXXX-XGXPF-XGXXRPPXXPXPXXXXXXXEPEXXTXXPG-RGTXKKXXGX 1324
G GNPG G P G PP P P + PG R
Sbjct: 116 GPAGPAGNPGADGDAGSPGEAGGAGPPGPPGPDGNPGAPGNDGEAGSPGTRSISSPGPAG 175
Query: 1325 XXXPXRPXGNXGGPXPXXGGXXPGPXXP 1408
P P G G P GG PGP P
Sbjct: 176 PAGPPGPPGPDGAPG---GGSGPGPAGP 200
>Z69787-1|CAA93642.1| 300|Caenorhabditis elegans Hypothetical protein
C44C10.1 protein.
Length = 300
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 1117 GGPXXP-PXGXXXRPGSXGXEPGXXXXXXPLPGXXKAPXXPXPXG 1248
GGP P G PG+ G PG +PG AP P P G
Sbjct: 192 GGPGAPGQAGQDGHPGNAGA-PGAPGRVNEVPGPAGAPGAPGPDG 235
>U53344-2|AAP13769.1| 301|Caenorhabditis elegans Collagen protein
166, isoform b protein.
Length = 301
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 1117 GGPXXP-PXGXXXRPGSXGXEPGXXXXXXPLPGXXKAPXXPXPXG 1248
GGP P G PG+ G PG +PG AP P P G
Sbjct: 193 GGPGAPGQAGQDGHPGNAGA-PGAPGKVNEVPGPAGAPGAPGPDG 236
>U53344-1|AAA96223.1| 363|Caenorhabditis elegans Collagen protein
166, isoform a protein.
Length = 363
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 1117 GGPXXP-PXGXXXRPGSXGXEPGXXXXXXPLPGXXKAPXXPXPXG 1248
GGP P G PG+ G PG +PG AP P P G
Sbjct: 255 GGPGAPGQAGQDGHPGNAGA-PGAPGKVNEVPGPAGAPGAPGPDG 298
>U39644-6|AAO44907.1| 300|Caenorhabditis elegans Collagen protein 170
protein.
Length = 300
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 1117 GGPXXP-PXGXXXRPGSXGXEPGXXXXXXPLPGXXKAPXXPXPXG 1248
GGP P G PG+ G PG +PG AP P P G
Sbjct: 192 GGPGAPGQAGQDGHPGNAGA-PGAPGKVNEVPGPAGAPGAPGPDG 235
>U39644-5|AAO44906.1| 300|Caenorhabditis elegans Collagen protein 169
protein.
Length = 300
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 1117 GGPXXP-PXGXXXRPGSXGXEPGXXXXXXPLPGXXKAPXXPXPXG 1248
GGP P G PG+ G PG +PG AP P P G
Sbjct: 192 GGPGAPGQAGQDGHPGNAGA-PGAPGKVNEVPGPAGAPGAPGPDG 235
>U39644-4|AAA80357.2| 301|Caenorhabditis elegans Collagen protein 168
protein.
Length = 301
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 1117 GGPXXP-PXGXXXRPGSXGXEPGXXXXXXPLPGXXKAPXXPXPXG 1248
GGP P G PG+ G PG +PG AP P P G
Sbjct: 193 GGPGAPGQAGQDGHPGNAGA-PGAPGKVNEVPGPAGAPGAPGPDG 236
>U39644-3|AAA80358.2| 301|Caenorhabditis elegans Collagen protein 167
protein.
Length = 301
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/45 (37%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Frame = +1
Query: 1117 GGPXXP-PXGXXXRPGSXGXEPGXXXXXXPLPGXXKAPXXPXPXG 1248
GGP P G PG+ G PG +PG AP P P G
Sbjct: 193 GGPGAPGQAGQDGHPGNAGA-PGAPGKVNEVPGPAGAPGAPGPDG 236
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 1390 PRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P P G PPPP G PP PP
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 274
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 1345 PXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P G P G P P P G PPPP PP P PP
Sbjct: 240 PPPPKGSPPLAGSGSPPP---PPAAGS--PPPPRTGSPPPPPTGSPPPP 283
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 1390 PRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P P G PPPP G PP PP
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 295
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 1345 PXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P G P G P P P G PPPP PP P PP
Sbjct: 261 PPPPKGSPPLAGSGSPPP---PPAAGS--PPPPRTGSPPPPPTGSPPPP 304
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.9 bits (69), Expect = 1.2
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +1
Query: 1390 PRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P P G PPPP G PP PP
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPP 280
Score = 31.1 bits (67), Expect = 2.1
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 1345 PXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P G P G P P P G PPPP PP P PP
Sbjct: 246 PPPPKGSPPLAGSGSPPP---PPAAGS--PPPPRTGSPPPPPTGSPPPP 289
>Z70756-4|CAA94788.1| 290|Caenorhabditis elegans Hypothetical protein
T06E4.4 protein.
Length = 290
Score = 31.5 bits (68), Expect = 1.6
Identities = 23/96 (23%), Positives = 27/96 (28%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXXGXPFXGXXRPPXXPXPXXXXXXXEPEXXTXXPGRGTXKKXXGXXX 1330
PG+ G+PG P G R P P P PG+ G
Sbjct: 178 PGQAGAPGHPGA-----PGQGGQRSRGTPGPSGAPGPQGPAGGPGQPGQSGGAGAPGPAG 232
Query: 1331 XPXRPXGNXGGPXPXXGGXXPGPXXPXXERAXXPPP 1438
P P G P G P + A P P
Sbjct: 233 APGAPGGPGNAGTPGTPGAPGNAGAPGGDAAYCPCP 268
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical protein
T21B4.2 protein.
Length = 312
Score = 31.1 bits (67), Expect = 2.1
Identities = 35/125 (28%), Positives = 37/125 (29%)
Frame = -1
Query: 1490 GGXGXXXGGXXXPXPXGGGGXXXPFXXGXXXGRGXXPPXWGXXPXGSXGAVXVXXXPPXF 1311
GG G GG GGGG G PP P G+ GA P
Sbjct: 96 GGAGGGGGGGYATGGGGGGGGGGCCSCGIGAAGPAGPPGADGNP-GTDGAAG---NPGQ- 150
Query: 1310 FXGSXGXXXGXQXRVXXXXXPPXGXGXXGAXFXPGRGCXXXXXPGSXPXEPGRXXXPXGG 1131
G+ PP G G PG PG P PG P GG
Sbjct: 151 -AGADASQDAPSASDFCFDCPPGPAGPAGNAGPPG-------APGG-PGAPGNT--PSGG 199
Query: 1130 XXGPP 1116
GPP
Sbjct: 200 AAGPP 204
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical protein
C15A11.6 protein.
Length = 316
Score = 31.1 bits (67), Expect = 2.1
Identities = 27/99 (27%), Positives = 28/99 (28%), Gaps = 4/99 (4%)
Frame = +1
Query: 1204 LPGXXKAPXXPXPXGGXXXXXTRXXNPFXXPXDP*KXXG--GXXXTXTAPXEPW--GXXP 1371
LPG AP P P G P P G G AP P G
Sbjct: 140 LPGPAGAPGQPGPKGPNGNPGAPAQGGGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSG 199
Query: 1372 XXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXP 1488
G P P P +G P G G P P P
Sbjct: 200 QRGRGLPGPSGAPGSQGPPGAPGQPGSGNAPGPAGPPGP 238
>Z46791-3|CAA86757.1| 323|Caenorhabditis elegans Hypothetical protein
C09G5.4 protein.
Length = 323
Score = 31.1 bits (67), Expect = 2.1
Identities = 26/97 (26%), Positives = 30/97 (30%), Gaps = 1/97 (1%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXXGXPFXGXXRPPXXPXPXXXXXXXEPEXXTXXPGRGTXKKXXGXXX 1330
PG+V GNPG G R P P P PG+ + G
Sbjct: 182 PGQVGAPGNPGQAG-----RGGQRSHGLPGPSGAPGPQGPSGAPGQPGQSGGQGQQG-PA 235
Query: 1331 XPXRPXGNXGGPXPXXGGXXPG-PXXPXXERAXXPPP 1438
P P G G P PG P + A P P
Sbjct: 236 GPAGPDGQPGQPGQDGQAGAPGNDGAPGADAAYCPCP 272
>AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical
protein C44B12.5 protein.
Length = 397
Score = 31.1 bits (67), Expect = 2.1
Identities = 15/52 (28%), Positives = 15/52 (28%), Gaps = 2/52 (3%)
Frame = +1
Query: 1339 TAPXEPWGXXPXXGGXX--PRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXP 1488
TAP WG P P P G P G PP P P
Sbjct: 339 TAPSTSWGAAPAAPSTSWGAAPAAPPTWGGAPTAAPTWGAANDAPPAATPAP 390
>AF026211-4|AAB71295.1| 416|Caenorhabditis elegans Collagen protein
40 protein.
Length = 416
Score = 31.1 bits (67), Expect = 2.1
Identities = 31/111 (27%), Positives = 31/111 (27%), Gaps = 2/111 (1%)
Frame = -2
Query: 1465 GXXGPXXXGGGGXXXPFXXGXXXAGXXXPXXGGGXPXVPXGPXXXXGXPLXFFXGPXAXX 1286
G GP GG G P G A P GG P P GP G P
Sbjct: 178 GPAGPA--GGPGPAGP--PGPAGADGNTPSGGGEGPAGPPGPPGPAGNP---GTDGAPGN 230
Query: 1285 XGXXFGFXXXXXXPXXXGGGGPXXP--XEGXAXXXGXRVPXRXNPAGXXPP 1139
G P G GP P G G P PAG P
Sbjct: 231 PGAPGQVTETPGTPGPAGAAGPPGPPGPAGNPGSAGASEPGPAGPAGDAGP 281
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical protein
W01B6.7 protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.8
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = +3
Query: 1221 GPPPPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXXXPAX 1400
GPP P P P A GP P GP G G P G P
Sbjct: 153 GPPGPAGPAGPPGPPGPDGNPGSPA-GPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 1401 XXPXXKGXXXPP-PPXXXGP 1457
G P PP GP
Sbjct: 212 SEQGGPGEPGPAGPPGPAGP 231
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 30.7 bits (66), Expect = 2.8
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = +3
Query: 1221 GPPPPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXXXPAX 1400
GPP P P P A GP P GP G G P G P
Sbjct: 153 GPPGPAGPAGPPGPPGPDGNPGSPA-GPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 1401 XXPXXKGXXXPP-PPXXXGP 1457
G P PP GP
Sbjct: 212 SEQGGPGEPGPAGPPGPAGP 231
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein 43
protein.
Length = 303
Score = 30.7 bits (66), Expect = 2.8
Identities = 32/111 (28%), Positives = 34/111 (30%), Gaps = 10/111 (9%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXX-GXPFXGXXRPPXXPX----PXXXXXXXEP-EXXTXXPGRGTXKK 1312
PG G PG G P G PP P P P + PG
Sbjct: 169 PGEAGTPGRPGTDATPGLP--GPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAG 226
Query: 1313 XXGXXXXPXRPX--GNXGGPXPXXGGXXPGPXXPX--XERAXXPPPPXXXG 1453
G P P GN G P P PGP P +A P PP G
Sbjct: 227 DAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPPGQAG 277
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.elegans
(nematode)collagen 2 (col-2) gene, complete cds. ).
Length = 301
Score = 30.7 bits (66), Expect = 2.8
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = +3
Query: 1221 GPPPPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXXXPAX 1400
GPP P P P A GP P GP G G P G P
Sbjct: 153 GPPGPAGPAGPPGPPGPDGNPGSPA-GPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 1401 XXPXXKGXXXPP-PPXXXGP 1457
G P PP GP
Sbjct: 212 SEQGGPGEPGPAGPPGPAGP 231
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 30.7 bits (66), Expect = 2.8
Identities = 23/80 (28%), Positives = 23/80 (28%), Gaps = 1/80 (1%)
Frame = +3
Query: 1221 GPPPPXXXGXXXXXXNPXLXPXXXAXGPXKKXRGXPXXXNGPXGTXGXPPPXXGXXXPAX 1400
GPP P P P A GP P GP G G P G P
Sbjct: 153 GPPGPAGPAGPPGPPGPDGNPGSPA-GPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGA 211
Query: 1401 XXPXXKGXXXPP-PPXXXGP 1457
G P PP GP
Sbjct: 212 SEQGGPGEPGPAGPPGPAGP 231
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen protein.
Length = 303
Score = 30.7 bits (66), Expect = 2.8
Identities = 32/111 (28%), Positives = 34/111 (30%), Gaps = 10/111 (9%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXX-GXPFXGXXRPPXXPX----PXXXXXXXEP-EXXTXXPGRGTXKK 1312
PG G PG G P G PP P P P + PG
Sbjct: 169 PGEAGTPGRPGTDATPGLP--GPRGPPGPPGEAGQPGPQGDAGTPAQSEPLTPGAPGEAG 226
Query: 1313 XXGXXXXPXRPX--GNXGGPXPXXGGXXPGPXXPX--XERAXXPPPPXXXG 1453
G P P GN G P P PGP P +A P PP G
Sbjct: 227 DAGPAGPPGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPPGQAG 277
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical protein
C15A11.5 protein.
Length = 316
Score = 29.9 bits (64), Expect = 4.9
Identities = 24/90 (26%), Positives = 25/90 (27%), Gaps = 4/90 (4%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXXGXPFXGXXRPPXXPXPXXXXXXXEPEXXTXXPGR----GTXKKXX 1318
PG GNPG G G PP P P PG G +
Sbjct: 150 PGPKGPNGNPGAPAQG----GGQGPPGPPGPAGSAGSPGQAGAPGNPGSPGKSGQRGRGL 205
Query: 1319 GXXXXPXRPXGNXGGPXPXXGGXXPGPXXP 1408
P G G P G PGP P
Sbjct: 206 PGPSGAPGPQGPPGAPGQPGSGNAPGPAGP 235
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.9 bits (64), Expect = 4.9
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 1345 PXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P G P GG P P PPPP G P P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 1369 PXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P GG P P P G PPPP G PP PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGG----LPPITGGPPP 744
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 1345 PXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P G P GG P P PPPP G PP P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.9 bits (64), Expect = 4.9
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 1345 PXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P G P GG P P PPPP G P P PP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 1369 PXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P GG P P P G PPPP G PP PP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPPGG----LPPITGGPPP 744
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 1345 PXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P G P GG P P PPPP G PP P PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPP 790
>U14635-8|AAK84492.1| 307|Caenorhabditis elegans Collagen protein 36
protein.
Length = 307
Score = 29.9 bits (64), Expect = 4.9
Identities = 22/87 (25%), Positives = 26/87 (29%), Gaps = 1/87 (1%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXXGXPFXGXXRPPXXPXPXXXXXXXEPEXXTXXPGRGTXKKXXGXXX 1330
PG + G PG P +P P PG G
Sbjct: 199 PGMIGPPGPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTE 258
Query: 1331 XPXR-PXGNXGGPXPXXGGXXPGPXXP 1408
+ P G+ GGP P G PGP P
Sbjct: 259 IGGQGPPGDAGGPGPVGGQGPPGPQGP 285
>L15418-1|AAA17445.1| 307|Caenorhabditis elegans col-36 collagen
protein.
Length = 307
Score = 29.9 bits (64), Expect = 4.9
Identities = 22/87 (25%), Positives = 26/87 (29%), Gaps = 1/87 (1%)
Frame = +2
Query: 1151 PGRVXXGGNPGXXXXGXPFXGXXRPPXXPXPXXXXXXXEPEXXTXXPGRGTXKKXXGXXX 1330
PG + G PG P +P P PG G
Sbjct: 199 PGMIGPPGPPGGVGEPGPPGPAGQPGRVIQVNGAAGPAGPRGVKGPPGPKGLPGIAGLTE 258
Query: 1331 XPXR-PXGNXGGPXPXXGGXXPGPXXP 1408
+ P G+ GGP P G PGP P
Sbjct: 259 IGGQGPPGDAGGPGPVGGQGPPGPQGP 285
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.9 bits (64), Expect = 4.9
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 1345 PXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P G P GG P P PPPP G P P PP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 1369 PXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P GG P P P G PPPP G PP PP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPPGG----LPPITGGPPP 327
Score = 29.1 bits (62), Expect = 8.6
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 1345 PXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P G P GG P P PPPP G PP P PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP---PPPP 373
>Z70756-6|CAA94792.1| 290|Caenorhabditis elegans Hypothetical protein
T06E4.6 protein.
Length = 290
Score = 29.5 bits (63), Expect = 6.5
Identities = 17/73 (23%), Positives = 24/73 (32%)
Frame = +2
Query: 1223 PPXXPXPXXXXXXXEPEXXTXXPGRGTXKKXXGXXXXPXRPXGNXGGPXPXXGGXXPGPX 1402
P P P P+ + PG+ + G P P G+ G P PG
Sbjct: 132 PAGAPGPAGAPGAPGPQGPSGAPGQDAVGEGPGPAG-PQGPAGDAGAPGQAGAPGHPGAP 190
Query: 1403 XPXXERAXXPPPP 1441
+R+ P P
Sbjct: 191 GQGGQRSRGTPGP 203
>U21308-10|AAN65281.1| 329|Caenorhabditis elegans Roller: helically
twisted, animalsroll when moving protein 8, isoform a
protein.
Length = 329
Score = 29.5 bits (63), Expect = 6.5
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 1141 GXXXRPGSXGXE--PGXXXXXXPLPGXXKAPXXPXPXG 1248
G RPG G + PG P+PG AP P P G
Sbjct: 228 GPIGRPGRDGMKGAPGAAGRLIPVPGPQGAPGKPGPIG 265
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -3
Query: 1437 GGGXXALSXXGXXGPGXXPPXXGXGPPXF-PXGRXG 1333
G G L G GPG P G GP F P GR G
Sbjct: 49 GIGGPGLGGPGIGGPGLGGPGVGGGPGAFGPYGRYG 84
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 29.5 bits (63), Expect = 6.5
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 1/36 (2%)
Frame = -3
Query: 1437 GGGXXALSXXGXXGPGXXPPXXGXGPPXF-PXGRXG 1333
G G L G GPG P G GP F P GR G
Sbjct: 49 GIGGPGLGGPGIGGPGLGGPGVGGGPGAFGPYGRYG 84
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 29.5 bits (63), Expect = 6.5
Identities = 32/121 (26%), Positives = 35/121 (28%)
Frame = +1
Query: 1108 KXRGGPXXPPXGXXXRPGSXGXEPGXXXXXXPLPGXXKAPXXPXPXGGXXXXXTRXXNPF 1287
K G P PP G P E P P +P P P G + N
Sbjct: 132 KGTGSPPPPPTG---EPQDLSGEGNASRRPPPPPKGTGSP--PPPPTGEPQDLSTEGNAS 186
Query: 1288 XXPXDP*KXXGGXXXTXTAPXEPWGXXPXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXP 1467
P P K G T P P G P+ PPPP G G P
Sbjct: 187 RRPPPPPKGTG------TPPPPPTGE--------PQDLSAEGYASRRPPPPPKGTGSPTP 232
Query: 1468 P 1470
P
Sbjct: 233 P 233
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical protein
T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 8.6
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +1
Query: 1369 PXXGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P GG P P P G PPPP G PP PP
Sbjct: 78 PGPGGIPPPP---PMFAGGIPPPPPMMGGIPPPPPMFGAPP 115
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical protein
C09G5.5 protein.
Length = 317
Score = 29.1 bits (62), Expect = 8.6
Identities = 26/99 (26%), Positives = 27/99 (27%), Gaps = 4/99 (4%)
Frame = +1
Query: 1207 PGXXKAPXXPXPXGGXXXXXTRXXNPFXXPXDP*KXXG--GXXXTXTAPXEPW--GXXPX 1374
PG AP P P G P P G G AP P G
Sbjct: 139 PGPAGAPGNPGPQGPNGNPGAPAHGGGQGPPGPPGPAGDAGSPGQAGAPGNPGRPGQSGQ 198
Query: 1375 XGGXXPRPXXXPXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P P P +G P G G P P PP
Sbjct: 199 RSRGLPGPSGRPGPQGPPGAPGQPGSGSTPGPAGPPGPP 237
>M25477-1|AAA27991.1| 329|Caenorhabditis elegans collagen protein.
Length = 329
Score = 29.1 bits (62), Expect = 8.6
Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Frame = +1
Query: 1141 GXXXRPGSXGXE--PGXXXXXXPLPGXXKAPXXPXPXG 1248
G RPG G + PG P+PG AP P P G
Sbjct: 228 GPIGRPGRDGMKGAPGARGRLIPVPGPQGAPGKPGPIG 265
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.1 bits (62), Expect = 8.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 1408 PXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P +G PPPP G PP P PP
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.1 bits (62), Expect = 8.6
Identities = 12/28 (42%), Positives = 13/28 (46%)
Frame = +1
Query: 1408 PXXKGXXXPPPPXGXGXXXPPXXXPXPP 1491
P +G PPPP G PP P PP
Sbjct: 298 PPPRGHFPPPPPHFMGRGMPPPFMPPPP 325
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,897,273
Number of Sequences: 27780
Number of extensions: 552592
Number of successful extensions: 1986
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1651
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4329178048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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