Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_C07_e339_05.seq
         (1529 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    31   0.088
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              26   2.5  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    25   7.7  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 31.1 bits (67), Expect = 0.088
 Identities = 23/95 (24%), Positives = 37/95 (38%)
 Frame = +1

Query: 478 DFEHPSKPKWQPGETPAQVRPKDNLKPEGEFERSQRSKWTTSERTEQIKTKEHLHQEINF 657
           DF++ S  + QP     + R +  L  +   + S     T +  TE  K   HL+     
Sbjct: 58  DFDNESSEETQPPNDAGRDRLQQQLLQKSRLKSSNLKSTTYTRNTENDKLTRHLNTVKFS 117

Query: 658 QDKPKGHWQPGETPSQVRPKDNLKPEGDFDHPTKP 762
            D+P    +P    ++  PK   K     + P KP
Sbjct: 118 FDEPVPQ-KPDNAAAEGAPKPQRKLSDRGEPPPKP 151


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 26.2 bits (55), Expect = 2.5
 Identities = 16/84 (19%), Positives = 34/84 (40%)
 Frame = +1

Query: 571 ERSQRSKWTTSERTEQIKTKEHLHQEINFQDKPKGHWQPGETPSQVRPKDNLKPEGDFDH 750
           ++ Q+  WTT  R  Q   ++    +   Q +  G +QP +   Q++ +   +    +  
Sbjct: 303 QQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQTGRYQPPQMRQQLQQQQQQRQPQRYVV 362

Query: 751 PTKPKWQPGEIPTQVRPKDNLKPE 822
               + Q  +   Q + +   KPE
Sbjct: 363 AGSSQQQQQQHQQQQQKRKRPKPE 386


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 24.6 bits (51), Expect = 7.7
 Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 2/167 (1%)
 Frame = +1

Query: 121 QXNKFYDKQKGQWQPGDTPAQVRPKDNLKPQGEFEHPSKPKWQPGETPAQVRPKDNLKPE 300
           Q  + + +Q+ QWQ      Q +P+ +L  + + +    P+ Q      Q + +     +
Sbjct: 357 QQQQQHQQQQQQWQQQQQQQQ-QPRQSLPHRKQTQLQLSPRLQ------QQQQQQQQSQQ 409

Query: 301 GDFDRPQKTKWTSSERPDQVKPKDNLHPDGEFYDRPKTQWQPGD--TPAQIRPKDNLRPE 474
               +PQ+  WT+  R    + +  L        + + Q Q G+   P Q+R +      
Sbjct: 410 QQQQQPQQLLWTTVVRSCPSQRQRQLQQQ----QQQQQQQQQGERYVPPQLRQQ------ 459

Query: 475 GDFEHPSKPKWQPGETPAQVRPKDNLKPEGEFERSQRSKWTTSERTE 615
                  +P+ Q  + P Q RP+   +P+   +RSQ+ K    E  E
Sbjct: 460 ---RQQQQPQQQQQQRPQQQRPQQQ-RPQQ--QRSQQRKPAKPELIE 500


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,190,289
Number of Sequences: 2352
Number of extensions: 24143
Number of successful extensions: 86
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 86
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 179626590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)