Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_C07_e339_05.seq
(1529 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g19020.1 68416.m02415 leucine-rich repeat family protein / ex... 56 8e-08
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 43 6e-04
At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid t... 41 0.002
At1g26150.1 68414.m03192 protein kinase family protein similar t... 37 0.040
At5g56330.1 68418.m07031 carbonic anhydrase family protein conta... 36 0.093
At5g18440.1 68418.m02172 hypothetical protein 32 1.2
At1g79280.1 68414.m09242 expressed protein weak similarity to Nu... 31 2.0
At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3) ... 31 2.0
At3g45780.1 68416.m04953 protein kinase / nonphototropic hypocot... 31 2.7
At3g07980.1 68416.m00975 protein kinase, putative similar to MAP... 31 2.7
At4g19570.1 68417.m02877 DNAJ heat shock N-terminal domain-conta... 30 3.5
At2g31030.1 68415.m03783 oxysterol-binding family protein simila... 30 3.5
At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family... 30 3.5
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 30 4.6
At2g08986.1 68415.m01009 hypothetical protein 30 4.6
At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative ... 29 8.1
At1g06190.1 68414.m00651 expressed protein 29 8.1
>At3g19020.1 68416.m02415 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 956
Score = 55.6 bits (128), Expect = 8e-08
Identities = 53/200 (26%), Positives = 75/200 (37%), Gaps = 9/200 (4%)
Frame = +1
Query: 160 QPGDTPAQVRPKDNLKPQGEFEHPSKPKWQPGETPAQVRPKDNLKPEGDFDRPQKTKWTS 339
+P TP PK + P E PSKPK P E+P +P KPE P K
Sbjct: 410 KPTPTPKAPEPKKEINPPN-LEEPSKPK--PEESPKPQQPSP--KPETPSHEPSNPKEPK 464
Query: 340 SERPDQVKPKDNLHPDGEFYDRPKTQWQPGDTPAQIRPK-DNLRPEGDFEHPSKPKW--- 507
E P Q PK + ++ Q P Q +PK ++ + E + P KP+
Sbjct: 465 PESPKQESPKTEQPKPKPESPKQESPKQEAPKPEQPKPKPESPKQESSKQEPPKPEESPK 524
Query: 508 ----QPGETPAQVRPKDNLKPEGEFERSQRSKWTTSERTEQIKTKEHLHQEINFQDKPKG 675
+P E+P PK E + Q K T + E K + + ++ PK
Sbjct: 525 PEPPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKPQPPKQETPKPEESPKP 584
Query: 676 HWQPGETPSQVR-PKDNLKP 732
E P + PK P
Sbjct: 585 QPPKQEQPPKTEAPKMGSPP 604
Score = 55.2 bits (127), Expect = 1e-07
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 2/189 (1%)
Frame = +1
Query: 160 QPGDTPAQVRPKDNLKPQGEFEHPSKPKWQPGETPAQVRPK-DNLKPEGDFDRPQKTKWT 336
+P ++P +P KP+ PS PK E+P Q PK + KP+ + + + K
Sbjct: 436 KPEESPKPQQPSP--KPETPSHEPSNPKEPKPESPKQESPKTEQPKPKPESPKQESPK-Q 492
Query: 337 SSERPDQVKPK-DNLHPDGEFYDRPKTQWQPGDTPAQIRPKDNLRPEGDFEHPSKPKWQP 513
+ +P+Q KPK ++ + + PK + P P +P+++ +P+ + KP+ P
Sbjct: 493 EAPKPEQPKPKPESPKQESSKQEPPKPEESPKPEPP--KPEESPKPQPPKQETPKPEESP 550
Query: 514 GETPAQVRPKDNLKPEGEFERSQRSKWTTSERTEQIKTKEHLHQEINFQDKPKGHWQPGE 693
P + ++ KPE E + Q K T + E K + ++ + PK P E
Sbjct: 551 KPQPPK---QETPKPE-ESPKPQPPKQETPKPEESPKPQPPKQEQPPKTEAPKMGSPPLE 606
Query: 694 TPSQVRPKD 720
+P P D
Sbjct: 607 SPVPNDPYD 615
Score = 50.4 bits (115), Expect = 3e-06
Identities = 47/148 (31%), Positives = 58/148 (39%), Gaps = 7/148 (4%)
Frame = +1
Query: 421 QPGDTPAQIRPKDNLRPEGDFEHPSKPKWQPGETPAQVRPKDNL---KPEGEFERSQRSK 591
+P TP PK + P + E PSKPK + P Q PK +P E S
Sbjct: 410 KPTPTPKAPEPKKEINPP-NLEEPSKPKPEESPKPQQPSPKPETPSHEPSNPKEPKPESP 468
Query: 592 WTTSERTEQIKTK-EHLHQEINFQDKPKGHWQPG---ETPSQVRPKDNLKPEGDFDHPTK 759
S +TEQ K K E QE Q+ PK QP E+P Q K + P
Sbjct: 469 KQESPKTEQPKPKPESPKQESPKQEAPKPE-QPKPKPESPKQESSKQEPPKPEESPKPEP 527
Query: 760 PKWQPGEIPTQVRPKDNLKPEGDFDRPQ 843
PK P E P PK + +PQ
Sbjct: 528 PK--PEESPKPQPPKQETPKPEESPKPQ 553
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 42.7 bits (96), Expect = 6e-04
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 8/136 (5%)
Frame = +1
Query: 175 PAQVRPKDNLKPQGEF--EHPSKPKWQPG--ETPAQVRP--KDNLKPEGDFDRPQKTKWT 336
P +P D+ KP+ E PS PK QP E+P P K L + + +PQ +K
Sbjct: 411 PVMPKPSDSSKPETPKTPEQPS-PKPQPPKHESPKPEEPENKHELPKQKESPKPQPSKPE 469
Query: 337 SSERPDQVKPKDNLHPDGEFYDRPKTQWQPGDTPAQIRPKD--NLRPEGDFEHPSKPKWQ 510
S +P+Q KP+++ P+ P P + P D + P + P PK +
Sbjct: 470 DSPKPEQPKPEESPKPEQPQIPEPTKPVSPPNEAQGPTPDDPYDASPVKNRRSPPPPKVE 529
Query: 511 PGETPAQVRPKDNLKP 558
P P + P
Sbjct: 530 DTRVPPPQPPMPSPSP 545
Score = 36.7 bits (81), Expect = 0.040
Identities = 24/82 (29%), Positives = 36/82 (43%)
Frame = +1
Query: 316 PQKTKWTSSERPDQVKPKDNLHPDGEFYDRPKTQWQPGDTPAQIRPKDNLRPEGDFEHPS 495
P +T +P+ V PK + D + PKT QP P Q ++ +PE
Sbjct: 398 PPRTSEPKPSKPEPVMPKPS---DSSKPETPKTPEQPSPKP-QPPKHESPKPEEPENKHE 453
Query: 496 KPKWQPGETPAQVRPKDNLKPE 561
PK + P +P+D+ KPE
Sbjct: 454 LPKQKESPKPQPSKPEDSPKPE 475
Score = 36.3 bits (80), Expect = 0.053
Identities = 35/113 (30%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Frame = +1
Query: 493 SKPKWQPGETPAQVRPKDNLKPEGEFERSQRSKWTTSERTEQIKTK--EHLHQEINFQDK 666
S+PK E P +P D+ KPE Q S + E K + E+ H+ ++
Sbjct: 402 SEPKPSKPE-PVMPKPSDSSKPETPKTPEQPSPKPQPPKHESPKPEEPENKHELPKQKES 460
Query: 667 PKGHWQPGE---TPSQVRPKDNLKPE-GDFDHPTKPKWQPGEI--PTQVRPKD 807
PK E P Q +P+++ KPE PTKP P E PT P D
Sbjct: 461 PKPQPSKPEDSPKPEQPKPEESPKPEQPQIPEPTKPVSPPNEAQGPTPDDPYD 513
>At3g22120.1 68416.m02792 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to
SP|Q00451|PRF1_LYCES 36.4 kDa proline-rich protein
Lycopersicon esculentum, proline-rich cell wall protein
[Medicago sativa] GI:3818416; contains Pfam profile
PF00234 Protease inhibitor/seed storage/LTP family
Length = 334
Score = 41.1 bits (92), Expect = 0.002
Identities = 36/135 (26%), Positives = 44/135 (32%), Gaps = 2/135 (1%)
Frame = +1
Query: 160 QPGDTPAQVRPKDNLKPQGEFEHPSKPKWQPGETPAQVRPKDNLKPEGDFDRPQKTK-WT 336
+P P V+P P HP P +P P PK KP +P TK
Sbjct: 89 KPHPKPPTVKPPHPKPPTKPHPHPKPPIVKPPTKPPPSTPKPPTKPPPSTPKPPTTKPPP 148
Query: 337 SSERPDQVKPKDNLHPDGEFYDRPKTQWQPGDTPAQIRPKDNLRPEGDFEHPSKPK-WQP 513
S+ +P KP P P P TP I P P P+ P P
Sbjct: 149 STPKPPHHKPPPTPCPPPTPTPTPPVVTPPTPTPPVITPPTPTPPVVTPPTPTPPVITPP 208
Query: 514 GETPAQVRPKDNLKP 558
TP + P P
Sbjct: 209 TPTPPVITPPTPTPP 223
Score = 32.3 bits (70), Expect = 0.87
Identities = 30/123 (24%), Positives = 39/123 (31%)
Frame = +1
Query: 172 TPAQVRPKDNLKPQGEFEHPSKPKWQPGETPAQVRPKDNLKPEGDFDRPQKTKWTSSERP 351
TP K + KP HP P +P P V+P P P+ +P
Sbjct: 64 TPKPPTVKPHPKPPTVKPHPKPPTVKPHPKPPTVKPPHPKPPTKPHPHPKPPIVKPPTKP 123
Query: 352 DQVKPKDNLHPDGEFYDRPKTQWQPGDTPAQIRPKDNLRPEGDFEHPSKPKWQPGETPAQ 531
PK P +P T P TP +P + P P+ P TP
Sbjct: 124 PPSTPKPPTKPPPS-TPKPPTTKPPPSTP---KPPHHKPPPTPCPPPTPTPTPPVVTPPT 179
Query: 532 VRP 540
P
Sbjct: 180 PTP 182
>At1g26150.1 68414.m03192 protein kinase family protein similar to
Pto kinase interactor 1 GI:3668069 from [Lycopersicon
esculentum]
Length = 760
Score = 36.7 bits (81), Expect = 0.040
Identities = 53/223 (23%), Positives = 74/223 (33%)
Frame = +1
Query: 172 TPAQVRPKDNLKPQGEFEHPSKPKWQPGETPAQVRPKDNLKPEGDFDRPQKTKWTSSERP 351
+P+ P P PS P P E P P + PE P T+ +
Sbjct: 79 SPSLTGPPPTTIPVSPPPEPSPPPPLPTEAPPPANPVSSPPPESSPPPPPPTEAPPTTPI 138
Query: 352 DQVKPKDNLHPDGEFYDRPKTQWQPGDTPAQIRPKDNLRPEGDFEHPSKPKWQPGETPAQ 531
P N P E P + P D P+ P L P S P+ P ++
Sbjct: 139 TSPSPPTNPPPPPE---SPPSLPAP-DPPSNPLPPPKLVPPSH----SPPRHLPSPPASE 190
Query: 532 VRPKDNLKPEGEFERSQRSKWTTSERTEQIKTKEHLHQEINFQDKPKGHWQPGETPSQVR 711
+ P P S+R S+ +E H + Q P G +P TPS
Sbjct: 191 IPPPPRHLPSP--PASERPSTPPSD-SEHPSPPPPGHPKRREQPPPPGSKRP--TPSPPS 245
Query: 712 PKDNLKPEGDFDHPTKPKWQPGEIPTQVRPKDNLKPEGDFDRP 840
P D+ +P HP+ P P E +P + P P
Sbjct: 246 PSDSKRPV----HPSPPS-PPEETLPPPKPSPDPLPSNSSSPP 283
>At5g56330.1 68418.m07031 carbonic anhydrase family protein contains
proline-rich extensin domains, INTERPRO:IPR002965;
contains Pfam profile PF00194: Eukaryotic-type carbonic
anhydrase
Length = 350
Score = 35.5 bits (78), Expect = 0.093
Identities = 42/165 (25%), Positives = 55/165 (33%), Gaps = 1/165 (0%)
Frame = +1
Query: 175 PAQVRPKDNLKPQGEFEHPSKPKWQPGETPAQVRPKDNLKPEGDFDRPQKTKWTSSERPD 354
PA PK P P KPK P TP + +PK P P T P
Sbjct: 24 PAPKPPKPKPAPAPT---PPKPKPTPAPTPPKPKPKPAPTPPKPKPAPAPTPPKPKPAPA 80
Query: 355 QVKPKDNLHPDGEFYDRPKTQWQPGDTPAQIRPKDNLRPEGDFEHPSKPKWQPGETP-AQ 531
PK P T P TPA PK P KPK P P +
Sbjct: 81 PTPPKPKPKP-------APTPPNPKPTPAPTPPKPKPAPAPAPTPAPKPKPAPKPAPGGE 133
Query: 532 VRPKDNLKPEGEFERSQRSKWTTSERTEQIKTKEHLHQEINFQDK 666
V + E + + +KW T + ++ + I+ +DK
Sbjct: 134 VEDETEFSYETKGNKGP-AKWGTLDAEWKMCGIGKMQSPIDLRDK 177
>At5g18440.1 68418.m02172 hypothetical protein
Length = 451
Score = 31.9 bits (69), Expect = 1.2
Identities = 30/106 (28%), Positives = 40/106 (37%), Gaps = 4/106 (3%)
Frame = +1
Query: 286 NLKPEGDFDRPQKTKWTSSERPDQVKPKDNLHPDGEFYDRPKTQWQPGDTPAQIRPKDNL 465
+L+P RPQ + S P P N + P+ Q Q D P N
Sbjct: 111 SLEPHAFSSRPQLNSFNSLPYPPVPNPHQNHQSGPPGFSEPRPQGQSVDNTNGSGPNGN- 169
Query: 466 RPEGDFEHPSKPKWQ----PGETPAQVRPKDNLKPEGEFERSQRSK 591
DF + PK Q PG+ P Q+ DN K + F + R K
Sbjct: 170 ----DFRN-KFPKHQNFKGPGQGP-QLHQADNGKRKSGFNKDHRGK 209
>At1g79280.1 68414.m09242 expressed protein weak similarity to
Nucleoprotein TPR (Swiss-Prot:P12270) [Homo sapiens]
Length = 2111
Score = 31.1 bits (67), Expect = 2.0
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 14/191 (7%)
Frame = +1
Query: 205 KPQGEFEHPS-----KPKW-QPGETPAQVRPKDNLKPEGDFDRPQKTKWTSSERPDQVKP 366
KP EF PS +P+ +P E+P + GD + S+ V+P
Sbjct: 1708 KPSTEFRRPSGRRIVRPQLVKPEESPKVDVDMPEAEGTGDEGKQPAAHEPESQVTTSVRP 1767
Query: 367 KDNL----HPDGEFYDRPKTQWQPGDTPAQIRPKDNLRPEGDFEHPSKPKWQPGETPAQV 534
L D + + G+T ++I P + + +G HP + GE A+
Sbjct: 1768 VQTLVRKRQADSLVSEPQQDSLTQGETSSEIAPPASKKAKGSESHPDTSE---GENLAKE 1824
Query: 535 RPKDNLKPEGEFERSQRSKWTTSERTEQIKTKEHLH-QEINFQDKPKGHWQPGET---PS 702
D L + ++ T +E E+ KT+E++ Q+ N D+P P ET P+
Sbjct: 1825 PAIDELM-DATTTTDGDNEETEAENAEE-KTEEYVEAQQDNEADEPVEE-SPTETETIPT 1881
Query: 703 QVRPKDNLKPE 735
+ +D + E
Sbjct: 1882 EEESRDQTEEE 1892
>At1g34360.1 68414.m04266 translation initiation factor 3 (IF-3)
family protein low similarity to Translation initiation
factor IF-3 from [subsp. Schizaphis graminum] {Buchnera
aphidicola} SP|P46243, {Salmonella typhimurium}
SP|P33321; contains Pfam profiles PF05198: Translation
initiation factor IF-3 N-terminal domain, PF00707:
Translation initiation factor IF-3 C-terminal domain
Length = 520
Score = 31.1 bits (67), Expect = 2.0
Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 6/171 (3%)
Frame = +1
Query: 67 NSARGGITGIESRKIIYIQXNKFYDKQKGQWQPGDTPAQVRPKDNL---KPQGEFEHPSK 237
+S++ G+ ++ ++ I +F +Q + + A+ P + FE S
Sbjct: 281 DSSKAGVATVDDQEDIEKSEPRFSVEQAQPVKFQNAYAKREPSSEFSGGRDASRFEPQSP 340
Query: 238 PKWQPGETPAQVRPKDNLKPEGDFDRPQKTKWTSSERPDQVKPKDNLHPDGEFYDRPKTQ 417
+ + P N +P G FD + S+ RP + D +F +P
Sbjct: 341 NQHVNPQRPRFSNQAPNQQPTGRFDPQSPNQPPSAPRPQFPNQQPTGRFDPQFPSQPPRP 400
Query: 418 WQPGDTPAQIRPKDNLRPEGDFEHPSKPKWQ-PGETPAQ--VRPKDNLKPE 561
P P Q + P+ + PS P+ + P + P Q P N P+
Sbjct: 401 QFPNQAPNQ-QSTGRFNPQFPNQRPSPPQSRFPDQAPNQQPSGPSPNRHPD 450
>At3g45780.1 68416.m04953 protein kinase / nonphototropic hypocotyl
protein 1 (NPH1) / phototropin identical to SP|O48963
Nonphototropic hypocotyl protein 1 (EC 2.7.1.37)
(Phototropin) {Arabidopsis thaliana}, cDNA
nonphototropic hypocotyl 1 (NPH1) GI:2832240; contains
Pfam profiles PF00069:Protein kinase domain and
PF00785:PAC motif
Length = 996
Score = 30.7 bits (66), Expect = 2.7
Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Frame = +1
Query: 403 RPKTQWQPGDTPAQIR---PKDNL-RPEGDFEHPSKPKWQ----PGETPAQVRPKDNLKP 558
+P ++ P DT + P L RP+ P P WQ P T Q RP+ P
Sbjct: 10 KPSSRTLPRDTRGSLEVFNPSTQLTRPDNPVFRPEPPAWQNLSDPRGTSPQPRPQQEPAP 69
Query: 559 EGEFERSQRSKWTTSERTEQIKTKEHLHQEINFQDKPK 672
Q TTS + + E + ++ +KP+
Sbjct: 70 SNPVRSDQEIAVTTSWMALKDPSPETISKKTITAEKPQ 107
>At3g07980.1 68416.m00975 protein kinase, putative similar to MAP3K
epsilon protein kinase [Arabidopsis thaliana]
gi|3549652|emb|CAA12272
Length = 1367
Score = 30.7 bits (66), Expect = 2.7
Identities = 20/62 (32%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Frame = +1
Query: 229 PSKPKWQPGET-PAQVRPKDNLKPEGDFDRPQKTKWTSSERPDQVKPKDNLHPDGEFYDR 405
P+ P + ET P+ + D LK TS+ + V D LHPDG DR
Sbjct: 801 PNNPIFSQRETSPSVIDHPDGLKTRNGGGEEPSHALTSNSQSSDVHQPDALHPDG---DR 857
Query: 406 PK 411
P+
Sbjct: 858 PR 859
>At4g19570.1 68417.m02877 DNAJ heat shock N-terminal
domain-containing protein low similarity to SP|Q9QYI4
DnaJ homolog subfamily B member 12 {Mus musculus};
contains Pfam profile PF00226: DnaJ domain
Length = 558
Score = 30.3 bits (65), Expect = 3.5
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +1
Query: 307 FDRPQKTKWTSSERPDQVKPKDNLHPDGEFYDRPKTQWQPGDTP---AQIRPKDNLRPEG 477
+D+ +K+ KPK + P D+P + + P P + RP+ N+ PE
Sbjct: 126 YDQKRKSNQVKQRTSGMQKPKRSSTPKPTESDKPASSYGPTPPPEPRPKRRPRPNI-PEP 184
Query: 478 DFEHPSKPKWQPGETP 525
D P + +P P
Sbjct: 185 DIPMPMPTRHKPKSKP 200
>At2g31030.1 68415.m03783 oxysterol-binding family protein similar
to SWH1 [Saccharomyces cerevisiae] GI:402658; contains
Pfam profile PF01237: Oxysterol-binding protein
Length = 489
Score = 30.3 bits (65), Expect = 3.5
Identities = 15/52 (28%), Positives = 24/52 (46%)
Frame = +1
Query: 520 TPAQVRPKDNLKPEGEFERSQRSKWTTSERTEQIKTKEHLHQEINFQDKPKG 675
T +++RP +GEFE R K +R Q + K+ + + K KG
Sbjct: 408 TDSRLRPDQRYLEKGEFEMGNREKLRLEQRQRQAREKQERGWKPTWFSKEKG 459
>At1g53645.1 68414.m06102 hydroxyproline-rich glycoprotein family
protein
Length = 523
Score = 30.3 bits (65), Expect = 3.5
Identities = 35/158 (22%), Positives = 61/158 (38%), Gaps = 9/158 (5%)
Frame = +1
Query: 169 DTPAQVRPKDNLKPQGEFEHPSKPKWQPGETPAQVRPKDNLKPEGDFDRPQKTKWTSS-- 342
+ P Q P + + S+P+ Q + Q +P D + F + Q+ + +S
Sbjct: 128 EPPRQSPPPPQQQQSQSQQQRSQPQQQQPRSQPQQQPNDESQGSPVFVKLQEMQDATSSP 187
Query: 343 ----ERPDQVKPKDNL-HPDGEFYDRPK--TQWQPGDTPAQIRPKDNLRPEGDFEHPSKP 501
+P Q P DN+ + G + P + +P A IR +DN + P +
Sbjct: 188 PPPESKPGQADPPDNIFNALGNEFSHPSGAGRGKPLVESAPIRQEDNRQIRRPPPPPQQQ 247
Query: 502 KWQPGETPAQVRPKDNLKPEGEFERSQRSKWTTSERTE 615
+ QP + A KP+ E + R + R E
Sbjct: 248 RVQPQQKRAPTVKDGTPKPQLSAEEAGRRARSELSRGE 285
>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
(CPK2) identical to calcium-dependent protein kinase
isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 646
Score = 29.9 bits (64), Expect = 4.6
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Frame = +1
Query: 490 PSKPKWQPGETPAQVRPKDNLKPEGEFERSQRSKWTTSERTEQIKTKEHLHQEINFQD-K 666
P +P P ++ P+ LKP+ E + ++ + +E T+Q E QE+ ++ K
Sbjct: 60 PPEPITMPS---SKTNPETKLKPDLEIQPEEKKEKVLAEETKQKVVPEESKQEVPPEESK 116
Query: 667 PKGHWQP----GETPSQVRPKDNLKPEGDFDHPTKPKWQP 774
+ QP ET S+ +P + KPE + + K +P
Sbjct: 117 REVVVQPESAKPETKSESKP-ETTKPETTSETKPETKAEP 155
>At2g08986.1 68415.m01009 hypothetical protein
Length = 1218
Score = 29.9 bits (64), Expect = 4.6
Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 14/170 (8%)
Frame = +1
Query: 274 RPKDNLKPEGDFDRPQKTKWTSSERPDQVKPKDN---------LHPDGEFYDRPKTQWQP 426
+ K + KP+ D K S++ KPK + L + +PKT
Sbjct: 385 KKKVDTKPKTHMDFGYTMKALRSKKKVDTKPKTHTDFDYTMKALRSKKKVNTKPKTHMDF 444
Query: 427 GDTPAQIRPK---DNLRPEGDFEHPSKPKWQPGETPAQVRPKDNLKPEGEFERSQRSKWT 597
G T +R K +N +P+ + K + +++P+ +LK + +K
Sbjct: 445 GYTVKALRSKKKVENTKPKTHMDFGYTMKALRSKKKVELKPQPDLKGVRIVSLLEDTKPK 504
Query: 598 TSERTEQIKTKEHLHQEINFQDKPKGHWQPGETPSQVRPKDN--LKPEGD 741
T E T + + KPK H G+T ++ K N LKP+ D
Sbjct: 505 T--HMEFGYTMKAFRSKKKVDTKPKTHMDFGDTMKALKSKKNVELKPQPD 552
>At1g76880.1 68414.m08946 trihelix DNA-binding protein, putative
similar to DNA-binding protein DF1 [Pisum sativum]
GI:13646986
Length = 603
Score = 29.1 bits (62), Expect = 8.1
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +1
Query: 130 KFYDKQKGQWQPGDTPAQVRPKDNLKPQGEFEHP--SKPKWQPGETPAQVR 276
K +KQ Q QP P QVRP L + + P S P P P ++
Sbjct: 329 KLSEKQPNQPQPQPQPQQVRPSMQLNNNNQQQPPQRSPPPQPPAPLPQPIQ 379
>At1g06190.1 68414.m00651 expressed protein
Length = 401
Score = 29.1 bits (62), Expect = 8.1
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 298 EGDFDRPQKTKWTSSERPDQVKPKDNLH--PDGEFYDRPKTQWQPGDTPAQIRPKDNLRP 471
E FD+ T +++ D V+ D P E P+ + +PG + P L+P
Sbjct: 251 EATFDQSSSYSVTWTQKKDTVELHDEPEHEPAYEHEHEPENESEPGPVTTMLEPDSELKP 310
Query: 472 E 474
E
Sbjct: 311 E 311
Score = 29.1 bits (62), Expect = 8.1
Identities = 14/61 (22%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = +1
Query: 559 EGEFERSQRSK--WTTSERTEQIKTKEHLHQEINFQDKPKGHWQPGETPSQVRPKDNLKP 732
E F++S WT + T ++ + + +P+ +PG + + P LKP
Sbjct: 251 EATFDQSSSYSVTWTQKKDTVELHDEPEHEPAYEHEHEPENESEPGPVTTMLEPDSELKP 310
Query: 733 E 735
E
Sbjct: 311 E 311
Score = 29.1 bits (62), Expect = 8.1
Identities = 11/48 (22%), Positives = 23/48 (47%)
Frame = +1
Query: 679 WQPGETPSQVRPKDNLKPEGDFDHPTKPKWQPGEIPTQVRPKDNLKPE 822
W + ++ + +P + +H + + +PG + T + P LKPE
Sbjct: 264 WTQKKDTVELHDEPEHEPAYEHEHEPENESEPGPVTTMLEPDSELKPE 311
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,783,387
Number of Sequences: 28952
Number of extensions: 524383
Number of successful extensions: 1316
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1285
length of database: 12,070,560
effective HSP length: 84
effective length of database: 9,638,592
effective search space used: 4096401600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -