Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_C06_e331_06.seq
         (1528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    25   4.4  
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    25   4.4  
EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   7.6  

>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
 Frame = +2

Query: 482 WVSNRCRRIRLLHRSTLTIPTTYSYITICSRGNETNEINRVRNEIIEFETK-SSSSKR-- 652
           W +N   R   LH   L      SY    S  NE   INR++ +++  + + S   KR  
Sbjct: 298 WKTNERFRSFHLHHELLYRGLKSSYERYLSDPNELTNINRIKGKMLLLQRRFSEDFKRIN 357

Query: 653 NYRVRTEIITEFAI 694
             RV  E I+ F +
Sbjct: 358 ETRVCGENISTFQL 371


>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1173

 Score = 25.4 bits (53), Expect = 4.4
 Identities = 16/70 (22%), Positives = 28/70 (40%)
 Frame = +1

Query: 190 QHHQEQVIRKILERKDKQPVKIEFKIFLTENTVTRWEAVVHGNTMYLRMPGVLQSGSKES 369
           QH        ++E    + +    ++ LT +   R  A     T   R+   ++ G +  
Sbjct: 306 QHRDVYWWAPVIEELRNECIAARERMRLTTDLQERSLAAAEHRTAKTRLEKAIKVGKRAE 365

Query: 370 FILLLDFAEE 399
           F  L+D AEE
Sbjct: 366 FAKLIDIAEE 375


>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 24.6 bits (51), Expect = 7.6
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +2

Query: 485 VSNRCRRIRLLHRSTLTIPTTYSYITICSRG 577
           ++    R RLL R+T+ +P     ++I SRG
Sbjct: 566 IAQNIARQRLLSRNTVALPPRKDTVSIPSRG 596


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,172,446
Number of Sequences: 2352
Number of extensions: 22265
Number of successful extensions: 43
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 179220195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)