BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_C04_e315_06.seq
(1570 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97; Eukary... 179 2e-43
UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14; Eukary... 165 3e-39
UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39; Euka... 146 1e-33
UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7; Fungi/M... 132 3e-29
UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6; Pezizo... 131 6e-29
UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8; Dikarya... 127 9e-28
UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4; Trypano... 126 2e-27
UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1; Dictyos... 124 8e-27
UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6; Trypano... 120 8e-26
UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, wh... 106 1e-21
UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1; ... 102 3e-20
UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: L... 102 3e-20
UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep: Bet... 102 3e-20
UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes a... 101 5e-20
UniRef50_UPI00006CAB39 Cluster: hypothetical protein TTHERM_0078... 101 7e-20
UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2; Cryptos... 99 2e-19
UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3; Trichom... 99 3e-19
UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular organ... 99 4e-19
UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;... 91 6e-17
UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n... 91 7e-17
UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramec... 89 3e-16
UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2; ... 87 1e-15
UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal ... 83 1e-14
UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27 pir|... 82 4e-14
UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3; Eukaryo... 79 4e-13
UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia... 73 3e-11
UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:... 67 1e-09
UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillar... 63 2e-08
UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1; ... 62 4e-08
UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1; ... 54 8e-06
UniRef50_P06219 Cluster: Beta-galactosidase; n=11; Gammaproteoba... 53 2e-05
UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1; Encepha... 53 2e-05
UniRef50_P81650 Cluster: Beta-galactosidase; n=26; Gammaproteoba... 44 0.008
UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia sp... 40 0.18
UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma j... 39 0.41
UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3; ... 38 0.95
UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8; Bacteria... 37 1.3
UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio choler... 36 2.2
UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1; Planta... 36 2.9
UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus la... 36 2.9
UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barre... 36 3.8
UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barre... 35 6.7
UniRef50_A7THH0 Cluster: Putative uncharacterized protein; n=1; ... 35 6.7
>UniRef50_P61353 Cluster: 60S ribosomal protein L27; n=97;
Eukaryota|Rep: 60S ribosomal protein L27 - Homo sapiens
(Human)
Length = 136
Score = 179 bits (435), Expect = 2e-43
Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
+GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV MGK KI KRSKIK FVK
Sbjct: 15 AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74
Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
NYNHLMPTRYSVD +K KD+ +DPA ++K R +V+FEERYK+GKNKWFFQKL
Sbjct: 75 YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134
Query: 496 RF 501
RF
Sbjct: 135 RF 136
>UniRef50_P91914 Cluster: 60S ribosomal protein L27; n=14;
Eukaryota|Rep: 60S ribosomal protein L27 -
Caenorhabditis elegans
Length = 136
Score = 165 bits (401), Expect = 3e-39
Identities = 75/121 (61%), Positives = 94/121 (77%), Gaps = 2/121 (1%)
Frame = +1
Query: 145 GRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGV 324
G+YAGRKA+VVK DEG SD+ Y HA +AGIDRYP KV K MGK KI KR+K+KPF+K V
Sbjct: 16 GKYAGRKAVVVKQQDEGVSDRTYPHAIIAGIDRYPLKVTKDMGKKKIEKRNKLKPFLKVV 75
Query: 325 NYNHLMPTRYSVDXSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLR 498
+Y HL+PTRYSVD +F+K + + LK P+K++K + +FEERYK+GKNKWFF KLR
Sbjct: 76 SYTHLLPTRYSVDVAFDKTNINKEALKAPSKKRKALVEVKSKFEERYKTGKNKWFFTKLR 135
Query: 499 F 501
F
Sbjct: 136 F 136
>UniRef50_P0C2H7 Cluster: 60S ribosomal protein L27-B; n=39;
Eukaryota|Rep: 60S ribosomal protein L27-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 136
Score = 146 bits (354), Expect = 1e-33
Identities = 64/121 (52%), Positives = 90/121 (74%), Gaps = 2/121 (1%)
Frame = +1
Query: 145 GRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGV 324
GRYAG+K ++VK +DEG+ P+GHA VAGI+RYP KV K+ G K+ KR+KIKPF+K V
Sbjct: 16 GRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPSKVTKKHGAKKVAKRTKIKPFIKVV 75
Query: 325 NYNHLMPTRYSVDXSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLR 498
NYNHL+PTRY++D K S + + P++R++ + + FEER+++GKN+WFF KLR
Sbjct: 76 NYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEERHQAGKNQWFFSKLR 135
Query: 499 F 501
F
Sbjct: 136 F 136
>UniRef50_Q6R7S0 Cluster: 60S ribosomal protein L27; n=7;
Fungi/Metazoa group|Rep: 60S ribosomal protein L27 -
Pectinaria gouldii (Trumpet worm) (Ice-cream cone worm)
Length = 138
Score = 132 bits (318), Expect = 3e-29
Identities = 61/124 (49%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
+GR+AG+K +V+K YD GTS++PY HAFV GIDRYPRKV MGK K +R+++K F K
Sbjct: 15 NGRHAGKKVVVMKIYDSGTSERPYAHAFVVGIDRYPRKVTATMGKKKFERRTRVKAFAKF 74
Query: 322 VNYNHLMPTRYSV----DXSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQ 489
+NYNHLM TRYSV + + F K+ + RK+ + + ER+ + KN+WFF
Sbjct: 75 INYNHLMFTRYSVQLFPEDKAKTFGPDRWKNFSDRKEFKKELQTVMRERFLAAKNRWFFT 134
Query: 490 KLRF 501
KLRF
Sbjct: 135 KLRF 138
>UniRef50_Q4WJD7 Cluster: 60S ribosomal protein L27e; n=6;
Pezizomycotina|Rep: 60S ribosomal protein L27e -
Aspergillus fumigatus (Sartorya fumigata)
Length = 186
Score = 131 bits (316), Expect = 6e-29
Identities = 60/121 (49%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Frame = +1
Query: 145 GRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGV 324
GRYAG+K ++V+ D G+ P+ +A VAGI+RYP KV +RMGK + KRS+IKPF+K V
Sbjct: 66 GRYAGKKVVIVQPNDTGSKAHPFPYAIVAGIERYPLKVTRRMGKKMVEKRSRIKPFIKIV 125
Query: 325 NYNHLMPTRYSVDXSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLR 498
NYNHLMPTRY+++ K S + K+ + R+ + + E+RY SGKN+WFF LR
Sbjct: 126 NYNHLMPTRYTLELEGLKGAISQETFKEVSTREDAKKTVKKALEDRYTSGKNRWFFTPLR 185
Query: 499 F 501
F
Sbjct: 186 F 186
>UniRef50_Q4P3X4 Cluster: 60S ribosomal protein L27; n=8;
Dikarya|Rep: 60S ribosomal protein L27 - Ustilago maydis
(Smut fungus)
Length = 190
Score = 127 bits (306), Expect = 9e-28
Identities = 57/113 (50%), Positives = 80/113 (70%), Gaps = 2/113 (1%)
Frame = +1
Query: 169 IVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPT 348
+V+K +D+G+ DK + + AGI+RYP+KV KRMG KI KRSK+KPFVK ++YNHLMPT
Sbjct: 78 VVIKQFDDGSKDKSFPYIIAAGIERYPQKVTKRMGAKKIAKRSKVKPFVKVISYNHLMPT 137
Query: 349 RYSVDXSFEK--FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 501
RY+++ K + K+P++R+ + + FEE+Y SGKNKWFF LRF
Sbjct: 138 RYALELEGLKGAVTQDTFKEPSQREDAKKQIKQIFEEKYTSGKNKWFFTPLRF 190
>UniRef50_Q86LP6 Cluster: 60S ribosomal protein L27; n=4;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 133
Score = 126 bits (304), Expect = 2e-27
Identities = 52/120 (43%), Positives = 84/120 (70%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
SGRYAG+KA++V+N D + ++PYGH+ +AG+ +YP+KV + M K I +RS++ F++
Sbjct: 14 SGRYAGKKAVIVQNTDSKSKERPYGHSLIAGMKKYPKKVVRGMSKRTIQRRSRVGVFLRV 73
Query: 322 VNYNHLMPTRYSVDXSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 501
VN+ H +PTRY++D S E ++ D +K+ + + R F+ RY +G N+WFFQ+LRF
Sbjct: 74 VNHKHFLPTRYNMDLSRELRGRINVSDASKKARSKQLVRKLFQARYNAGSNRWFFQRLRF 133
>UniRef50_Q55BE6 Cluster: 60S ribosomal protein L27; n=1;
Dictyostelium discoideum AX4|Rep: 60S ribosomal protein
L27 - Dictyostelium discoideum AX4
Length = 144
Score = 124 bits (298), Expect = 8e-27
Identities = 61/129 (47%), Positives = 84/129 (65%), Gaps = 9/129 (6%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDK--PYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFV 315
+G+YAGRKA+V+K +D+ T+ K PYGH VAGID+YPR + + M + I KR+ I+ FV
Sbjct: 16 NGKYAGRKAVVIKTFDDATASKSRPYGHCLVAGIDKYPRSIVRSMSRKTILKRTAIRSFV 75
Query: 316 KGVNYNHLMPTRYSVDXSFEK-FS------AKDLKDPAKRKKLRFNTRVRFEERYKSGKN 474
K VNYNH+MPTRY+ + E F+ + AKR R + FE ++K+GK+
Sbjct: 76 KVVNYNHIMPTRYNFEGRDESAFTGLKNTVTVESSQVAKRAHTRLAVKKIFEAKHKAGKS 135
Query: 475 KWFFQKLRF 501
KWFF KLRF
Sbjct: 136 KWFFSKLRF 144
>UniRef50_Q4Q504 Cluster: 60S ribosomal protein L27; n=6;
Trypanosomatidae|Rep: 60S ribosomal protein L27 -
Leishmania major
Length = 134
Score = 120 bits (290), Expect = 8e-26
Identities = 54/120 (45%), Positives = 81/120 (67%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
+GRYAG KA++V+N D T ++PYG A +AGI +YP+KV + M K I +RS++ F++
Sbjct: 15 AGRYAGHKAVIVQNSDVVTKERPYGRALLAGIKKYPKKVVRGMSKQTIARRSQVGVFLRV 74
Query: 322 VNYNHLMPTRYSVDXSFEKFSAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 501
VN+ H +PTRY+VD S E ++ D +KR + + R F+ RY +G + WFFQ+LRF
Sbjct: 75 VNHKHFLPTRYNVDMSKELRGKINVSDASKRSRSKRLVRHVFQARYNAGSSMWFFQRLRF 134
>UniRef50_A0BCG5 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=8; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_10, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1051
Score = 106 bits (255), Expect = 1e-21
Identities = 58/138 (42%), Positives = 83/138 (60%), Gaps = 18/138 (13%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
+GRYAG+KAI++K +E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K
Sbjct: 914 AGRYAGKKAILIKANEETTKDCKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQ 973
Query: 322 VNYNHLMPTRYSVDXS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY------ 459
+N NH+MPTRY ++ S E+ +LK+ KRK+LR N R E+Y
Sbjct: 974 LNLNHIMPTRYRLEESTLKEVRDRIERVKESELKNVEKRKELRKNLRKYLAEKYRTLPAG 1033
Query: 460 ----KSGKNKWFFQKLRF 501
K ++++ F KLRF
Sbjct: 1034 SLADKKAQSRFLFSKLRF 1051
>UniRef50_Q8GEG0 Cluster: Putative uncharacterized protein; n=1;
Erwinia amylovora|Rep: Putative uncharacterized protein
- Erwinia amylovora (Fire blight bacteria)
Length = 123
Score = 102 bits (244), Expect = 3e-20
Identities = 48/55 (87%), Positives = 48/55 (87%), Gaps = 2/55 (3%)
Frame = +1
Query: 616 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQF--AQPEWRMA 774
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ EWR A
Sbjct: 68 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRXLNGEWRFA 122
>UniRef50_Q37953 Cluster: LacZ protein; n=1; Phage M13mp18|Rep: LacZ
protein - Phage M13mp18
Length = 102
Score = 102 bits (244), Expect = 3e-20
Identities = 48/55 (87%), Positives = 48/55 (87%), Gaps = 2/55 (3%)
Frame = +1
Query: 616 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQF--AQPEWRMA 774
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ EWR A
Sbjct: 26 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 80
>UniRef50_P00722 Cluster: Beta-galactosidase; n=35; root|Rep:
Beta-galactosidase - Escherichia coli (strain K12)
Length = 1024
Score = 102 bits (244), Expect = 3e-20
Identities = 48/55 (87%), Positives = 48/55 (87%), Gaps = 2/55 (3%)
Frame = +1
Query: 616 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQF--AQPEWRMA 774
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ EWR A
Sbjct: 8 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQLRSLNGEWRFA 62
>UniRef50_Q16PM4 Cluster: 60S ribosomal protein L27; n=1; Aedes
aegypti|Rep: 60S ribosomal protein L27 - Aedes aegypti
(Yellowfever mosquito)
Length = 98
Score = 101 bits (242), Expect = 5e-20
Identities = 42/58 (72%), Positives = 52/58 (89%)
Frame = +1
Query: 145 GRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVK 318
GRYAGRKAI++K +D+GTSDK +GHA VAGIDRYPR+V +RM K ++HKRSKIKPF+K
Sbjct: 16 GRYAGRKAIILKTFDDGTSDKQFGHALVAGIDRYPRRVTRRMNKTRLHKRSKIKPFIK 73
>UniRef50_UPI00006CAB39 Cluster: hypothetical protein
TTHERM_00780960; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00780960 - Tetrahymena
thermophila SB210
Length = 128
Score = 101 bits (241), Expect = 7e-20
Identities = 40/73 (54%), Positives = 58/73 (79%)
Frame = +1
Query: 145 GRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGV 324
GR+AG+KA++VK+ ++GT D+ +GH VAG++R P+KV KRMG KI KR+ +KPF+K V
Sbjct: 31 GRFAGKKAVIVKSSEDGTKDRKFGHVLVAGVERSPKKVTKRMGSKKIQKRTSVKPFIKYV 90
Query: 325 NYNHLMPTRYSVD 363
N NH+MPTR ++
Sbjct: 91 NLNHIMPTRGQIN 103
>UniRef50_Q5CSF1 Cluster: 60S ribosomal protein L27; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L27 -
Cryptosporidium parvum Iowa II
Length = 162
Score = 99 bits (238), Expect = 2e-19
Identities = 40/73 (54%), Positives = 56/73 (76%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
+GRYAG+KA+VV ++ GT D+P+ VAG+++ P KVHKR+ K K+ K+S IKPF+K
Sbjct: 32 NGRYAGKKAVVVNTFESGTKDRPFPFVLVAGVEKAPLKVHKRLSKEKLKKKSTIKPFLKS 91
Query: 322 VNYNHLMPTRYSV 360
+N NH+MPTRY V
Sbjct: 92 INMNHVMPTRYVV 104
>UniRef50_A2DNC1 Cluster: 60S ribosomal protein L27; n=3;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L27
- Trichomonas vaginalis G3
Length = 139
Score = 99.1 bits (236), Expect = 3e-19
Identities = 50/125 (40%), Positives = 78/125 (62%), Gaps = 6/125 (4%)
Frame = +1
Query: 145 GRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGV 324
GR+AG+KA+V+ Y EGT D+ + +A V GI++YP+KV K M + K++++K FVK V
Sbjct: 15 GRHAGKKAVVLAAYPEGTEDRKFPYAIVMGIEKYPKKVTKDMPTEVLVKKTQVKLFVKAV 74
Query: 325 NYNHLMPTRYSV--DXSFEKFSAKD----LKDPAKRKKLRFNTRVRFEERYKSGKNKWFF 486
N+NH+M TR++V + F+K S + LKD +K L ++Y + K WFF
Sbjct: 75 NFNHVMLTRHNVKDEDFFKKISVEKVVAALKDAPAKKALLTEYAAVLRQKYLNNKMAWFF 134
Query: 487 QKLRF 501
+ L+F
Sbjct: 135 KPLQF 139
>UniRef50_Q47336 Cluster: LacZ-alpha peptide; n=2; cellular
organisms|Rep: LacZ-alpha peptide - Escherichia coli
Length = 90
Score = 98.7 bits (235), Expect = 4e-19
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +1
Query: 616 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 747
LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ
Sbjct: 22 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 65
>UniRef50_Q7RNR5 Cluster: 60S ribosomal protein L27 homolog; n=4;
Plasmodium|Rep: 60S ribosomal protein L27 homolog -
Plasmodium yoelii yoelii
Length = 181
Score = 91.5 bits (217), Expect = 6e-17
Identities = 38/71 (53%), Positives = 54/71 (76%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
+GR AG+KAI++ Y+ T ++PY + VAGI+++P KV K+M K KI KRSK+K FVK
Sbjct: 107 NGRRAGKKAIIINTYEGQTRERPYSYCLVAGIEKHPLKVTKKMSKGKIIKRSKVKAFVKY 166
Query: 322 VNYNHLMPTRY 354
+N NH++PTRY
Sbjct: 167 INVNHILPTRY 177
>UniRef50_Q4N659 Cluster: 60S ribosomal protein L27e, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L27e, putative -
Theileria parva
Length = 148
Score = 91.1 bits (216), Expect = 7e-17
Identities = 46/114 (40%), Positives = 70/114 (61%), Gaps = 3/114 (2%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
SGR AG KA+VV+ + + +PY + VAG+++ P KV K+M KI KR K+K FVK
Sbjct: 15 SGRRAGCKAVVVQTNESSSKKRPYLNCLVAGVEKAPMKVTKKMSSKKIEKRLKLKAFVKY 74
Query: 322 VNYNHLMPTRYSVDXSFEK---FSAKDLKDPAKRKKLRFNTRVRFEERYKSGKN 474
VN NHLMPTRY V + + S + +++ + RK+ R + + EE + + +N
Sbjct: 75 VNVNHLMPTRYMVTTTLDPKSLVSDEQMENKSSRKEARKSVKAVLEECFSNPEN 128
>UniRef50_A0C4W1 Cluster: 60S ribosomal protein L27; n=1; Paramecium
tetraurelia|Rep: 60S ribosomal protein L27 - Paramecium
tetraurelia
Length = 262
Score = 89.0 bits (211), Expect = 3e-16
Identities = 50/127 (39%), Positives = 71/127 (55%), Gaps = 18/127 (14%)
Frame = +1
Query: 175 VKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRY 354
+K +E T D + + V GI RYPRKV KRMG+ +I KR+ +K F+K +N NH+MPTRY
Sbjct: 136 IKANEESTKDAKFPNGLVVGIQRYPRKVTKRMGQKQIRKRTTLKVFIKQLNLNHIMPTRY 195
Query: 355 SVDXS--------FEKFSAKDLKDPAKRKKLRFNTRVRFEERY----------KSGKNKW 480
++ S E+ +LK+ KRK LR N R E+Y K ++++
Sbjct: 196 RLEESTLKEVRDRIERVKEAELKNVEKRKDLRKNLRKYLAEKYRTLPAGSLADKKAQSRF 255
Query: 481 FFQKLRF 501
F KLRF
Sbjct: 256 LFSKLRF 262
>UniRef50_UPI000049913D Cluster: 60S ribosomal protein L27; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L27 - Entamoeba histolytica HM-1:IMSS
Length = 139
Score = 87.0 bits (206), Expect = 1e-15
Identities = 47/127 (37%), Positives = 72/127 (56%), Gaps = 7/127 (5%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
SGR+AG+KA+V +GT D+ YG V G++R P K+ ++M R+ +K F K
Sbjct: 15 SGRFAGKKAVVSSVNLQGTKDRKYGFVTVVGVERAPLKITRKMSAKVQEMRTSVKSFCKV 74
Query: 322 VNYNHLMPTRYSVDXSFEKFS-AKDLK----DPAKRKKLRFNTRV--RFEERYKSGKNKW 480
+N NH+MPT+Y+V + E+F+ K +K + K + + +F E Y+ GK W
Sbjct: 75 INVNHVMPTKYTV--NLEQFNLIKQVKINNFEAGKVYPISQKKAISSQFAEEYRKGKESW 132
Query: 481 FFQKLRF 501
F KLRF
Sbjct: 133 LFTKLRF 139
>UniRef50_UPI0000F2B958 Cluster: PREDICTED: similar to ribosomal
protein L27; n=1; Monodelphis domestica|Rep: PREDICTED:
similar to ribosomal protein L27 - Monodelphis domestica
Length = 124
Score = 83.4 bits (197), Expect = 1e-14
Identities = 43/74 (58%), Positives = 50/74 (67%)
Frame = +1
Query: 157 GRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGVNYNH 336
G +I+ + D+GTSDK Y HA VAGID YPRK+ +GK KI KRSKIK FV NYNH
Sbjct: 5 GSSSILFYDTDDGTSDKSYSHAQVAGIDLYPRKLTAALGK-KISKRSKIKFFVAVYNYNH 63
Query: 337 LMPTRYSVDXSFEK 378
L RYSVD +K
Sbjct: 64 LKSIRYSVDIPLDK 77
>UniRef50_Q01A00 Cluster: RL27_PEA 60S ribosomal protein L27
pir||T06451 ribosomal protein L27- garden pea; n=1;
Ostreococcus tauri|Rep: RL27_PEA 60S ribosomal protein
L27 pir||T06451 ribosomal protein L27- garden pea -
Ostreococcus tauri
Length = 184
Score = 81.8 bits (193), Expect = 4e-14
Identities = 37/84 (44%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Frame = +1
Query: 253 KVHKRMGKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDXSFEKFSAKDLKDPAKRK-KLRF 429
+V K+M + K KRSK K F+K +NY+HLMPTRY++D +F+ D+ D A +K +
Sbjct: 101 QVTKKMDEKKQAKRSKCKTFIKNINYSHLMPTRYTLDVNFKDVVTSDVLDNATKKVAAQK 160
Query: 430 NTRVRFEERYKSGKNKWFFQKLRF 501
+ EER+K+GK++WFF +L F
Sbjct: 161 EAKKLLEERFKTGKSRWFFTRLAF 184
Score = 64.9 bits (151), Expect = 5e-09
Identities = 35/95 (36%), Positives = 51/95 (53%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
+GRYAG+KA++VKN D+G S PYGHA V G+ PRKV +N +H+ ++ PF
Sbjct: 33 AGRYAGKKAVIVKNVDDGNSAHPYGHALVCGLSTIPRKV-----RNDLHRCARTAPF--- 84
Query: 322 VNYNHLMPTRYSVDXSFEKFSAKDLKDPAKRKKLR 426
++ R + + D K AKR K +
Sbjct: 85 -GCTEILTARSVAFENAQVTKKMDEKKQAKRSKCK 118
>UniRef50_UPI0000498F17 Cluster: beta-galactosidase; n=3;
Eukaryota|Rep: beta-galactosidase - Entamoeba
histolytica HM-1:IMSS
Length = 86
Score = 78.6 bits (185), Expect = 4e-13
Identities = 38/55 (69%), Positives = 43/55 (78%)
Frame = +2
Query: 614 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVIAKRPAPIALPNSLRSLNGEWQI 778
HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVI++ LRSL +W++
Sbjct: 5 HWPSFYNVVTGKTLALPNLIALQHIPLSPAGVISEEARTDRPSQQLRSL--KWRM 57
Score = 38.7 bits (86), Expect = 0.41
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +1
Query: 712 SEEARTDRPSQQFAQPEWRMANCKR*YFCLKFAVXF 819
SEEARTDRPSQQ +WRMA R YF L +V +
Sbjct: 38 SEEARTDRPSQQLRSLKWRMAPEWR-YFLLTQSVRY 72
>UniRef50_Q7QVA1 Cluster: 60S ribosomal protein L27; n=1; Giardia
lamblia ATCC 50803|Rep: 60S ribosomal protein L27 -
Giardia lamblia ATCC 50803
Length = 135
Score = 72.5 bits (170), Expect = 3e-11
Identities = 38/118 (32%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Frame = +1
Query: 145 GRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGV 324
GR+AG+KA++V+ +A VAGI PR++ M + R +++ FVK +
Sbjct: 17 GRHAGKKAVIVEALPHNERGS---YAIVAGIAALPRRITNSMSDEEAVCRGRVRSFVKCM 73
Query: 325 NYNHLMPTRYSVDXSFEKF-SAKDLKDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
N NHLMPT ++ +++ F S + + D KR+++ F+ R ++ WFF KL
Sbjct: 74 NVNHLMPTSCRLENNYKDFISTQTVADVTKRREIIETVNKDFQRRILEHRDTWFFTKL 131
>UniRef50_Q669R9 Cluster: Beta-galactosidase; n=14; Yersinia|Rep:
Beta-galactosidase - Yersinia pseudotuberculosis
Length = 1066
Score = 66.9 bits (156), Expect = 1e-09
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +1
Query: 616 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 747
L +L RRDWENP +TQ +RL AHPPF SWR+ E A+ DRPS Q
Sbjct: 15 LPQILSRRDWENPQITQYHRLEAHPPFHSWRDVESAQKDRPSPQ 58
>UniRef50_Q98SC5 Cluster: 60S ribosomal protein L27; n=1; Guillardia
theta|Rep: 60S ribosomal protein L27 - Guillardia theta
(Cryptomonas phi)
Length = 144
Score = 62.9 bits (146), Expect = 2e-08
Identities = 42/133 (31%), Positives = 67/133 (50%), Gaps = 13/133 (9%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYD-EGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVK 318
SG+YAG+KA V+KN + E +K + GI + +K+ M K KI + K F+K
Sbjct: 15 SGKYAGKKAFVLKNSNIESLCEKKI---IILGIKKEMKKIKYNMSKRKIISNLRFKTFIK 71
Query: 319 GVNYNHLMPTRYSV--DXSFE---------KFSAKDLKDPAKRKKLRF-NTRVRFEERYK 462
+N H+ PTRY + D F+ K K + ++ K+ + ++R
Sbjct: 72 TINIKHVFPTRYVIETDDVFKTLIDAYYTNKLGNKLNEHTNEKAKVNLVSINNYLQDRLL 131
Query: 463 SGKNKWFFQKLRF 501
GKN WFF+K++F
Sbjct: 132 RGKNLWFFKKMKF 144
>UniRef50_A5I8K6 Cluster: Putative uncharacterized protein; n=1;
Tribolium castaneum|Rep: Putative uncharacterized
protein - Tribolium castaneum (Red flour beetle)
Length = 95
Score = 62.1 bits (144), Expect = 4e-08
Identities = 32/77 (41%), Positives = 44/77 (57%)
Frame = +1
Query: 271 GKNKIHKRSKIKPFVKGVNYNHLMPTRYSVDXSFEKFSAKDLKDPAKRKKLRFNTRVRFE 450
G+ + +R + +P V G + H+ P S K K P KRK++RF TRV+ +
Sbjct: 19 GRGQNTQRVQNQPLVIGCDEKHVSPHVIGGITSGGPIPTKSSKYPIKRKRVRFQTRVKVQ 78
Query: 451 ERYKSGKNKWFFQKLRF 501
E KSG+NKWFFQK RF
Sbjct: 79 EGSKSGRNKWFFQKGRF 95
>UniRef50_A7MN76 Cluster: Putative uncharacterized protein; n=1;
Enterobacter sakazakii ATCC BAA-894|Rep: Putative
uncharacterized protein - Enterobacter sakazakii ATCC
BAA-894
Length = 1043
Score = 54.4 bits (125), Expect = 8e-06
Identities = 20/42 (47%), Positives = 28/42 (66%)
Frame = +1
Query: 616 LAVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPS 741
LA +L R DW+NP +T +NRL +H P WR+++ AR PS
Sbjct: 18 LATILARNDWQNPAITSVNRLPSHTPLHGWRDADRARRGEPS 59
>UniRef50_P06219 Cluster: Beta-galactosidase; n=11;
Gammaproteobacteria|Rep: Beta-galactosidase - Klebsiella
pneumoniae
Length = 1034
Score = 53.2 bits (122), Expect = 2e-05
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +1
Query: 625 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQFAQ 756
VL R DW N +T LNRL AHP FASWR+ AR + PS + Q
Sbjct: 17 VLAREDWHNQTITHLNRLPAHPVFASWRDELAARDNLPSSRRRQ 60
>UniRef50_Q8SS64 Cluster: 60S RIBOSOMAL PROTEIN L27; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L27
- Encephalitozoon cuniculi
Length = 126
Score = 52.8 bits (121), Expect = 2e-05
Identities = 35/121 (28%), Positives = 55/121 (45%), Gaps = 1/121 (0%)
Frame = +1
Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
SG+ AG+KA+V+K DE + A + R P++ K + +K +K
Sbjct: 13 SGKNAGKKAVVIKQIDER-------YVLTACVVRIPKEPEDHQPKWIKRRNAKFYIILKK 65
Query: 322 VNYNHLMPTRYSVDXSFEKFSAKDLKDPAKRKKLRFN-TRVRFEERYKSGKNKWFFQKLR 498
N HL+ TRY D ++D A+ KK+ N T+ + +K K K+ F L
Sbjct: 66 YNIAHLIATRYKADLGLATIDYSGIEDNAETKKVLTNKTKDAMMKAWKENKAKFLFSSLS 125
Query: 499 F 501
F
Sbjct: 126 F 126
>UniRef50_P81650 Cluster: Beta-galactosidase; n=26;
Gammaproteobacteria|Rep: Beta-galactosidase -
Pseudoalteromonas haloplanktis (Alteromonas
haloplanktis)
Length = 1039
Score = 44.4 bits (100), Expect = 0.008
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +1
Query: 625 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQ 747
++ RRDWENP Q+N++ AH P ++ E+AR + SQ+
Sbjct: 7 IINRRDWENPITVQVNQVKAHSPLNGFKTIEDARENTQSQK 47
>UniRef50_A0ZLG1 Cluster: Beta-D-galactosidase; n=1; Nodularia
spumigena CCY 9414|Rep: Beta-D-galactosidase - Nodularia
spumigena CCY 9414
Length = 72
Score = 39.9 bits (89), Expect = 0.18
Identities = 18/25 (72%), Positives = 19/25 (76%), Gaps = 2/25 (8%)
Frame = +1
Query: 703 WRNSEEARTDRPSQQF--AQPEWRM 771
WRNSEEARTDRPSQQ EWR+
Sbjct: 47 WRNSEEARTDRPSQQLRSLNGEWRL 71
>UniRef50_Q5DC94 Cluster: SJCHGC09076 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC09076 protein - Schistosoma
japonicum (Blood fluke)
Length = 109
Score = 38.7 bits (86), Expect = 0.41
Identities = 20/53 (37%), Positives = 30/53 (56%)
Frame = +1
Query: 619 AVVLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQFAQPEWRMAN 777
A L+RR+ +NPG QLN L A P F +++A +R S+ + PE + N
Sbjct: 57 AAFLKRREGKNPGCPQLNPLEALPLFPGGEKTKKAPPNRLSKNWPPPEGQRQN 109
>UniRef50_Q4Z0C1 Cluster: Putative uncharacterized protein; n=3;
Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein - Plasmodium berghei
Length = 275
Score = 37.5 bits (83), Expect = 0.95
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +2
Query: 440 SVSKRDTRAERTNGSSRSLGSKV*F*KINIIAVMXXXXXXT--------RGGARYPIRPI 595
+ +KR+T +E T G + ++ +INI+ + RGGARYPIRPI
Sbjct: 215 NATKRETSSEETQGLNNKTRNR----EINILDKLYVRNEFNQAYRYRRPRGGARYPIRPI 270
Query: 596 VSRIT 610
VSRIT
Sbjct: 271 VSRIT 275
>UniRef50_A6FJQ2 Cluster: 50S ribosomal protein L5; n=8;
Bacteria|Rep: 50S ribosomal protein L5 - Moritella sp.
PE36
Length = 45
Score = 37.1 bits (82), Expect = 1.3
Identities = 19/29 (65%), Positives = 23/29 (79%), Gaps = 2/29 (6%)
Frame = -2
Query: 768 SPFRLR--KLLGRAIGAGLFAITPAGERG 688
+PF ++ +LLGRAIGAGLFAITP E G
Sbjct: 10 APFAIQAAQLLGRAIGAGLFAITPEFELG 38
>UniRef50_Q9JN59 Cluster: Beta-galactosidase; n=16; Vibrio
cholerae|Rep: Beta-galactosidase - Vibrio cholerae
Length = 56
Score = 36.3 bits (80), Expect = 2.2
Identities = 16/49 (32%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 625 VLQRRDWENPGVTQLNRLAAHPPFASWRNSEEARTD-RPSQQFAQPEWR 768
+L +DW+NP + + + H P S+R +EAR D ++Q +WR
Sbjct: 7 ILLSQDWQNPHIVKWHCRTPHVPLHSYRTEQEARLDVGGNRQSLNGQWR 55
>UniRef50_Q0P6N7 Cluster: Plasma memebrane H+-ATPase; n=1;
Plantago major|Rep: Plasma memebrane H+-ATPase -
Plantago major (Common plantain)
Length = 106
Score = 35.9 bits (79), Expect = 2.9
Identities = 18/29 (62%), Positives = 19/29 (65%)
Frame = +3
Query: 3 SWXXPALAAALXTSGXPPGCRXSARGGNI 89
SW PA+AAAL PPGCR SARG I
Sbjct: 1 SWSSPAVAAALELVD-PPGCRNSARGPGI 28
>UniRef50_Q48727 Cluster: Beta-galactosidase; n=3; Lactococcus
lactis|Rep: Beta-galactosidase - Lactococcus lactis
subsp. lactis (Streptococcus lactis)
Length = 998
Score = 35.9 bits (79), Expect = 2.9
Identities = 14/23 (60%), Positives = 17/23 (73%)
Frame = +1
Query: 625 VLQRRDWENPGVTQLNRLAAHPP 693
VL+R+DWENP V+ NRL H P
Sbjct: 9 VLERKDWENPVVSNWNRLPMHTP 31
>UniRef50_A0UVE2 Cluster: Glycoside hydrolase family 2, TIM barrel;
n=1; Clostridium cellulolyticum H10|Rep: Glycoside
hydrolase family 2, TIM barrel - Clostridium
cellulolyticum H10
Length = 1033
Score = 35.5 bits (78), Expect = 3.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 637 RDWENPGVTQLNRLAAHPPFASWRNSEEA 723
R+WEN +TQ+NR H P+ ++ + E+A
Sbjct: 3 REWENQYITQINRYPMHSPYGAYESVEQA 31
>UniRef50_Q15XN9 Cluster: Glycoside hydrolase family 2, TIM barrel
precursor; n=1; Pseudoalteromonas atlantica T6c|Rep:
Glycoside hydrolase family 2, TIM barrel precursor -
Pseudoalteromonas atlantica (strain T6c / BAA-1087)
Length = 1079
Score = 34.7 bits (76), Expect = 6.7
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = +1
Query: 634 RRDWENPGVTQLNRLAAHPPFASWRNSEEARTDRPSQQFAQ 756
+ DWENP V Q+NRL A S+ E+A T +Q Q
Sbjct: 31 KNDWENPDVIQINRLPARATSYSFDTPEQALTRDRNQSTIQ 71
>UniRef50_A7THH0 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 968
Score = 34.7 bits (76), Expect = 6.7
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = -1
Query: 355 NNGLALDDCSLHLLRKA*-----FSTACEFYFFPSFYEPCAGICRCRRRKHVRMVCQMCP 191
+NG +D C+ LRK FS C+F+ P C + CRR + R C P
Sbjct: 385 HNGPCMDPCTQIELRKCSCNYKEFSVPCQFHEKPRCNMKCESLMSCRRHRCTRRCCSGKP 444
Query: 190 RRNSLRQWLY 161
+ ++ L+
Sbjct: 445 MADKRKKMLF 454
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,051,630,105
Number of Sequences: 1657284
Number of extensions: 19976209
Number of successful extensions: 45380
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43107
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45301
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 168570820550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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