Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_C04_e315_06.seq
         (1570 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_02_0470 - 10700092-10700505                                        128   1e-29
10_08_0951 - 21769342-21769752                                        128   2e-29
09_02_0036 + 3217163-3217584,3217752-3218322                           30   4.3  
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675...    30   4.3  
10_02_0059 + 4785858-4786988                                           30   5.7  
09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555     30   5.7  
09_02_0555 - 10588685-10592038                                         30   5.7  
03_02_1029 - 13488535-13493037                                         30   5.7  

>02_02_0470 - 10700092-10700505
          Length = 137

 Score =  128 bits (309), Expect = 1e-29
 Identities = 59/122 (48%), Positives = 86/122 (70%), Gaps = 3/122 (2%)
 Frame = +1

Query: 145 GRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGV 324
           GRYAGRKA++V+ ++EGT D+PYGH  VAG+ +YP+KV ++    K  K+S++K F+K V
Sbjct: 16  GRYAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLV 75

Query: 325 NYNHLMPTRYSVDXSFEKFSAKDLKDPAKR-KKLRF--NTRVRFEERYKSGKNKWFFQKL 495
           N+ H+MPTRY++D  F+  ++      A R KK+      + R EER+K+GKN+WFF KL
Sbjct: 76  NFTHIMPTRYTLDVDFKDVASGGPDALATRDKKVAACKAAKARLEERFKTGKNRWFFTKL 135

Query: 496 RF 501
           RF
Sbjct: 136 RF 137


>10_08_0951 - 21769342-21769752
          Length = 136

 Score =  128 bits (308), Expect = 2e-29
 Identities = 56/121 (46%), Positives = 86/121 (71%), Gaps = 2/121 (1%)
 Frame = +1

Query: 145 GRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKGV 324
           GR+AGRKA++V+ ++EGT D+PYGH  VAG+ +YP+KV ++    K  K+S++K F+K V
Sbjct: 16  GRFAGRKAVIVRVFEEGTRDRPYGHCLVAGLAKYPKKVIRKDSAKKTAKKSRVKCFLKLV 75

Query: 325 NYNHLMPTRYSVDXSFEKFSAKDLKDPAKRKKLRF--NTRVRFEERYKSGKNKWFFQKLR 498
           N+ HLMPTRY++D   ++ +A       + KK+    + + R E+R+K+GKN+WFF KLR
Sbjct: 76  NFTHLMPTRYTLDVDLKEVAAGPDALATRDKKVAACKSAKARLEDRFKTGKNRWFFTKLR 135

Query: 499 F 501
           F
Sbjct: 136 F 136


>09_02_0036 + 3217163-3217584,3217752-3218322
          Length = 330

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 605 ITIHWPSFYNVV-TGKTLALPNLIALQH 685
           I+  W  F N+V +G TL++PN + LQH
Sbjct: 69  ISAGWSRFINLVQSGPTLSIPNYVLLQH 96


>08_02_0167 -
           13564466-13566227,13566361-13566644,13566684-13567540,
           13567684-13567957,13567973-13568218
          Length = 1140

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 14/30 (46%), Positives = 19/30 (63%)
 Frame = -3

Query: 455 LSSKRTLVLKRSFLRLAGSFRSFALNFSKL 366
           L   +++   RSFL LAG +R F  NFSK+
Sbjct: 495 LKQPKSVTQVRSFLGLAGYYRRFIKNFSKI 524


>10_02_0059 + 4785858-4786988
          Length = 376

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -3

Query: 443 RTLVLKRSFLRLAGSFRSFALNFSKL 366
           +T+   RSFL LAG +R F  NFSK+
Sbjct: 218 KTVTQIRSFLGLAGYYRRFIENFSKI 243


>09_04_0061 - 14256767-14256845,14256862-14257224,14260846-14261555
          Length = 383

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -3

Query: 443 RTLVLKRSFLRLAGSFRSFALNFSKL 366
           +T+   RSFL LAG +R F  NFSK+
Sbjct: 275 KTVTQIRSFLGLAGYYRRFIENFSKI 300


>09_02_0555 - 10588685-10592038
          Length = 1117

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -3

Query: 443 RTLVLKRSFLRLAGSFRSFALNFSKL 366
           +T+   RSFL LAG +R F  NFSK+
Sbjct: 405 KTVTQIRSFLGLAGYYRRFIENFSKI 430


>03_02_1029 - 13488535-13493037
          Length = 1500

 Score = 29.9 bits (64), Expect = 5.7
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = -3

Query: 443 RTLVLKRSFLRLAGSFRSFALNFSKL 366
           +T+   RSFL LAG +R F  NFSK+
Sbjct: 788 KTVTQIRSFLGLAGYYRRFIENFSKI 813


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,216,242
Number of Sequences: 37544
Number of extensions: 604230
Number of successful extensions: 1548
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1491
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 5070121196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)