Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_C04_e315_06.seq
         (1570 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L19527-1|AAA19815.1|  136|Homo sapiens ribosomal protein L27 pro...   179   3e-44
L05094-1|AAC15857.1|  136|Homo sapiens ribosomal protein L27 pro...   179   3e-44
BC098560-1|AAH98560.1|  136|Homo sapiens ribosomal protein L27 p...   179   3e-44
BC021886-1|AAH21886.1|  140|Homo sapiens RPL27 protein protein.       179   3e-44
BC010026-1|AAH10026.1|  136|Homo sapiens ribosomal protein L27 p...   179   3e-44
BC007273-1|AAH07273.1|  136|Homo sapiens ribosomal protein L27 p...   179   3e-44
BC002588-1|AAH02588.1|  136|Homo sapiens ribosomal protein L27 p...   179   3e-44
BC001700-1|AAH01700.1|  136|Homo sapiens ribosomal protein L27 p...   179   3e-44
AB061851-1|BAB79492.1|  136|Homo sapiens ribosomal protein L27 p...   179   3e-44
U25752-1|AAA93226.1|   40|Homo sapiens ribosomal protein L27 pro...    60   2e-08

>L19527-1|AAA19815.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  179 bits (435), Expect = 3e-44
 Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = +1

Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
           +GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV   MGK KI KRSKIK FVK 
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
            NYNHLMPTRYSVD   +K    KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 496 RF 501
           RF
Sbjct: 135 RF 136


>L05094-1|AAC15857.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  179 bits (435), Expect = 3e-44
 Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = +1

Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
           +GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV   MGK KI KRSKIK FVK 
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
            NYNHLMPTRYSVD   +K    KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 496 RF 501
           RF
Sbjct: 135 RF 136


>BC098560-1|AAH98560.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  179 bits (435), Expect = 3e-44
 Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = +1

Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
           +GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV   MGK KI KRSKIK FVK 
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
            NYNHLMPTRYSVD   +K    KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 496 RF 501
           RF
Sbjct: 135 RF 136


>BC021886-1|AAH21886.1|  140|Homo sapiens RPL27 protein protein.
          Length = 140

 Score =  179 bits (435), Expect = 3e-44
 Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = +1

Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
           +GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV   MGK KI KRSKIK FVK 
Sbjct: 19  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 78

Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
            NYNHLMPTRYSVD   +K    KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKL
Sbjct: 79  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 138

Query: 496 RF 501
           RF
Sbjct: 139 RF 140


>BC010026-1|AAH10026.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  179 bits (435), Expect = 3e-44
 Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = +1

Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
           +GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV   MGK KI KRSKIK FVK 
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
            NYNHLMPTRYSVD   +K    KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 496 RF 501
           RF
Sbjct: 135 RF 136


>BC007273-1|AAH07273.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  179 bits (435), Expect = 3e-44
 Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = +1

Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
           +GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV   MGK KI KRSKIK FVK 
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
            NYNHLMPTRYSVD   +K    KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 496 RF 501
           RF
Sbjct: 135 RF 136


>BC002588-1|AAH02588.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  179 bits (435), Expect = 3e-44
 Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = +1

Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
           +GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV   MGK KI KRSKIK FVK 
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
            NYNHLMPTRYSVD   +K    KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 496 RF 501
           RF
Sbjct: 135 RF 136


>BC001700-1|AAH01700.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  179 bits (435), Expect = 3e-44
 Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = +1

Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
           +GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV   MGK KI KRSKIK FVK 
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
            NYNHLMPTRYSVD   +K    KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 496 RF 501
           RF
Sbjct: 135 RF 136


>AB061851-1|BAB79492.1|  136|Homo sapiens ribosomal protein L27
           protein.
          Length = 136

 Score =  179 bits (435), Expect = 3e-44
 Identities = 84/122 (68%), Positives = 98/122 (80%), Gaps = 2/122 (1%)
 Frame = +1

Query: 142 SGRYAGRKAIVVKNYDEGTSDKPYGHAFVAGIDRYPRKVHKRMGKNKIHKRSKIKPFVKG 321
           +GRY+GRKA++VKN D+GTSD+PY HA VAGIDRYPRKV   MGK KI KRSKIK FVK 
Sbjct: 15  AGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKV 74

Query: 322 VNYNHLMPTRYSVDXSFEKFSA-KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKL 495
            NYNHLMPTRYSVD   +K    KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKL
Sbjct: 75  YNYNHLMPTRYSVDIPLDKTVVNKDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKL 134

Query: 496 RF 501
           RF
Sbjct: 135 RF 136


>U25752-1|AAA93226.1|   40|Homo sapiens ribosomal protein L27
           protein.
          Length = 40

 Score = 60.5 bits (140), Expect = 2e-08
 Identities = 26/39 (66%), Positives = 33/39 (84%), Gaps = 1/39 (2%)
 Frame = +1

Query: 388 KDL-KDPAKRKKLRFNTRVRFEERYKSGKNKWFFQKLRF 501
           KD+ +DPA ++K R   +V+FEERYK+GKNKWFFQKLRF
Sbjct: 2   KDVFRDPALKRKARREAKVKFEERYKTGKNKWFFQKLRF 40


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,380,706
Number of Sequences: 237096
Number of extensions: 3345423
Number of successful extensions: 10331
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9777
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10296
length of database: 76,859,062
effective HSP length: 94
effective length of database: 54,572,038
effective search space used: 23356832264
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)