Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_C01_e291_05.seq
         (1563 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   4.5  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   5.9  

>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 25.4 bits (53), Expect = 4.5
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +1

Query: 778  ERPAGSALECHRQHRLRRMGGHAASSSSYRCELD 879
            ERP  +    H   +L+ +G    S SSYR E +
Sbjct: 1066 ERPFVAVQRAHDNAKLQTIGAREESFSSYRSETE 1099


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.0 bits (52), Expect = 5.9
 Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
 Frame = -1

Query: 795 RASGTLKLSRMLDDNLLGSREYTLKNEVAATVSFSPAGVFSVNI-FHVQFFN--CFMSIF 625
           R  G +   R L  N  G   Y LKNE   TVS S A +  + + F++Q  N  C ++  
Sbjct: 173 RYGGRIICERTL--NASGGGSYKLKNEHGQTVSTSRAELQKILLAFNIQVDNPICVLNQD 230

Query: 624 FAR 616
            AR
Sbjct: 231 LAR 233


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,119,846
Number of Sequences: 2352
Number of extensions: 20969
Number of successful extensions: 52
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 184096935
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)