Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_C01_e291_05.seq
(1563 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical ... 44 2e-04
AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical ... 44 2e-04
AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein phosp... 33 0.42
AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase ... 33 0.42
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 31 1.7
Z66524-5|CAC70104.1| 566|Caenorhabditis elegans Hypothetical pr... 30 5.1
Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z81462-8|CAB03846.3| 545|Caenorhabditis elegans Hypothetical pr... 29 6.8
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 29 8.9
Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical pr... 29 8.9
AF025450-2|AAB70936.3| 350|Caenorhabditis elegans Hypothetical ... 29 8.9
>AL021479-7|CAN99702.1| 234|Caenorhabditis elegans Hypothetical
protein Y22F5A.3b protein.
Length = 234
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 920 ALCEESHEVGMKTLVMLDEQGEXLDXFE 1003
ALCEES E G+KTLVMLD+QGE L+ E
Sbjct: 61 ALCEESKEAGIKTLVMLDDQGEQLERCE 88
>AL021479-6|CAA16322.2| 207|Caenorhabditis elegans Hypothetical
protein Y22F5A.3a protein.
Length = 207
Score = 44.4 bits (100), Expect = 2e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +2
Query: 920 ALCEESHEVGMKTLVMLDEQGEXLDXFE 1003
ALCEES E G+KTLVMLD+QGE L+ E
Sbjct: 34 ALCEESKEAGIKTLVMLDDQGEQLERCE 61
Score = 29.9 bits (64), Expect = 5.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +3
Query: 852 LEQLQMRAGQVTDESLESTRRMM 920
LE + ++ TD+SLESTRRM+
Sbjct: 11 LEAINLKMNATTDDSLESTRRML 33
>AF023454-1|AAB82794.1| 707|Caenorhabditis elegans protein
phosphatase with EF-hands protein.
Length = 707
Score = 33.5 bits (73), Expect = 0.42
Identities = 27/121 (22%), Positives = 50/121 (41%)
Frame = +2
Query: 365 DLERSKGAEPATVTVEELRDYNYNNENDASYCPSNMPNNDDWSNEDASAAIDLHEQVKLA 544
+L++S A T + + +YN NN+N +S N + S + +S K
Sbjct: 15 ELKKSTRATTTTTSSSQRNNYNDNNQNTSS-SSGNKKESSSSSKQHSSKKSKKSNSKKNR 73
Query: 545 EPDEITDMLEPPTKVAKIFIPYAMRAKKIDMKQLKNCTWKMLTEKTPAGEKETVAATSFF 724
P + T + I I R + ++ + TW++ T AGE++ + FF
Sbjct: 74 SPSPQPQL----TIKSAILIQKWYRRCEARLEARRRATWQIFTALEYAGEQDQLKLYDFF 129
Query: 725 S 727
+
Sbjct: 130 A 130
>AF003389-11|AAC71139.2| 707|Caenorhabditis elegans Phosphatase
with ef hands protein1, isoform a protein.
Length = 707
Score = 33.5 bits (73), Expect = 0.42
Identities = 27/121 (22%), Positives = 50/121 (41%)
Frame = +2
Query: 365 DLERSKGAEPATVTVEELRDYNYNNENDASYCPSNMPNNDDWSNEDASAAIDLHEQVKLA 544
+L++S A T + + +YN NN+N +S N + S + +S K
Sbjct: 15 ELKKSTRATTTTTSSSQRNNYNDNNQNTSS-SSGNKKESSSSSKQHSSKKSKKSNSKKNR 73
Query: 545 EPDEITDMLEPPTKVAKIFIPYAMRAKKIDMKQLKNCTWKMLTEKTPAGEKETVAATSFF 724
P + T + I I R + ++ + TW++ T AGE++ + FF
Sbjct: 74 SPSPQPQL----TIKSAILIQKWYRRCEARLEARRRATWQIFTALEYAGEQDQLKLYDFF 129
Query: 725 S 727
+
Sbjct: 130 A 130
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 31.5 bits (68), Expect = 1.7
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = +1
Query: 208 DATGQDHDQQEDFSYGTHVERGELQDSYR*RTGRVAFP*IILEAESGDVTQEGSREEQGR 387
DA D ++ FSYG HV +GE +D G+V I++ E + +E + E+ R
Sbjct: 94 DAFKISTDSEDGFSYGHHVSKGEKKDD----LGKVGQAERIIQEEMEERAKENTEEKLSR 149
>Z66524-5|CAC70104.1| 566|Caenorhabditis elegans Hypothetical
protein T13H5.8 protein.
Length = 566
Score = 29.9 bits (64), Expect = 5.1
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 200 YEPTQPAKIMISRKTLATGHTWNEANFKTPIDRGLDESHFRKLFLRRKVVML 355
YEPT AK+++ T + H + FK D+ +DE R LF +V+L
Sbjct: 246 YEPTSVAKLLLLTSTARSTHQLMKHGFK---DKDVDE--LRGLFTETSIVLL 292
>Z83110-6|CAB05528.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 873 LASVAARARCVAPHSPQAVLPMAFESRASGTLKLSRMLDDNLLGSREYTLKNEVAATVSF 694
L S+ + + +++ P + + S + +LS + +N L + L N + +++F
Sbjct: 59 LRSINTTDPSTSGYDSKSITPQQNDPKLSMSAELSSFIANNSLNPLDSILLNSLHKSINF 118
Query: 693 SPAGVFS 673
SP VFS
Sbjct: 119 SPRVVFS 125
>Z81462-8|CAB03846.3| 545|Caenorhabditis elegans Hypothetical
protein F57C2.6 protein.
Length = 545
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = -1
Query: 873 LASVAARARCVAPHSPQAVLPMAFESRASGTLKLSRMLDDNLLGSREYTLKNEVAATVSF 694
L S+ + + +++ P + + S + +LS + +N L + L N + +++F
Sbjct: 59 LRSINTTDPSTSGYDSKSITPQQNDPKLSMSAELSSFIANNSLNPLDSILLNSLHKSINF 118
Query: 693 SPAGVFS 673
SP VFS
Sbjct: 119 SPRVVFS 125
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 29.1 bits (62), Expect = 8.9
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 5/89 (5%)
Frame = +2
Query: 269 EANFKTPIDRGLDE--SHFRKLFLRRKVVMLRKRDLE-RSKGAEPATVTVEE--LRDYNY 433
E + KT +D+ L E S +L KV+ R LE ++ E +EE L + N
Sbjct: 1223 ELSEKTELDKELQEAKSEIGRLVEIEKVLNNRILSLEDQNLELEERLQEMEEELLDEKNK 1282
Query: 434 NNENDASYCPSNMPNNDDWSNEDASAAID 520
E DA + N DW +DA AA +
Sbjct: 1283 KKEVDAKVEQKSEENWGDWGEDDAEAATE 1311
>Z48543-1|CAA88432.1| 645|Caenorhabditis elegans Hypothetical
protein C18D1.1 protein.
Length = 645
Score = 29.1 bits (62), Expect = 8.9
Identities = 18/68 (26%), Positives = 31/68 (45%)
Frame = +1
Query: 595 NIHTVRDASEENRHETVEELHVENVDGENTGRGKGNCGGDFVLQRVLSTTQQIVVQHARQ 774
N+ D S + R +LH+E + +G+G+ D LQ Q+VVQ+ Q
Sbjct: 477 NLLECTDCSYKTRDPKNLDLHMERHIKMSEAKGRGDEDEDVALQLTTEAALQMVVQNQNQ 536
Query: 775 LERPAGSA 798
+ + +A
Sbjct: 537 YDGDSTAA 544
>AF025450-2|AAB70936.3| 350|Caenorhabditis elegans Hypothetical
protein C41H7.5 protein.
Length = 350
Score = 29.1 bits (62), Expect = 8.9
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 592 ENIHTVRDASEENRHETVEELHVENV 669
E + R+A +E HE EE HVE V
Sbjct: 208 EMVDRTREAKQEENHENHEEYHVEEV 233
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,601,802
Number of Sequences: 27780
Number of extensions: 483931
Number of successful extensions: 1629
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1627
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4514820630
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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