Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B12_e378_04.seq
         (1485 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6LF92 Cluster: Putative uncharacterized protein; n=1; ...    36   2.1  
UniRef50_Q81JZ9 Cluster: Sensory box/GGDEF family protein; n=13;...    35   4.7  
UniRef50_A0KFC7 Cluster: TorS-related protein; n=2; Aeromonas|Re...    34   8.3  

>UniRef50_Q6LF92 Cluster: Putative uncharacterized protein; n=1;
            Plasmodium falciparum 3D7|Rep: Putative uncharacterized
            protein - Plasmodium falciparum (isolate 3D7)
          Length = 1340

 Score = 36.3 bits (80), Expect = 2.1
 Identities = 25/83 (30%), Positives = 39/83 (46%)
 Frame = +3

Query: 183  NQHT*NGENNI*NVHTGSTTVQYKFIHYIITFIYLYIYVDKTTPTSNIDSTTCKHIFIYL 362
            N +  N  NN  N+  G    +  F++YI  FI+ +  VDK    +N+     ++I  Y+
Sbjct: 819  NNNNNNNNNNNNNIICGDEDKKNYFVNYIKPFIFRFQNVDKNDIPNNL-----RNINKYM 873

Query: 363  *DKVRNNK*IDIHIIYSLKSFSI 431
             +K+ NN   D    Y   S SI
Sbjct: 874  YNKINNNDHYDYTNFYGEDSISI 896


>UniRef50_Q81JZ9 Cluster: Sensory box/GGDEF family protein; n=13;
           Bacillus cereus group|Rep: Sensory box/GGDEF family
           protein - Bacillus anthracis
          Length = 909

 Score = 35.1 bits (77), Expect = 4.7
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = -3

Query: 496 FYIQFTAD-RFCEKVDVICGRALIEKLFKLYIICISIHLLFRTLSYKYIKMCLHV-VLSI 323
           FY+ F     F    ++I  R L+EKLF +  ICI +   F    Y  I+  +HV   S 
Sbjct: 106 FYLLFLISFAFAFLYEIIYNRDLLEKLFMICDICIIVTAQFTLSYYLLIERTIHVFTTSY 165

Query: 322 LDVGVVLS 299
           +D+ V L+
Sbjct: 166 IDIFVQLT 173


>UniRef50_A0KFC7 Cluster: TorS-related protein; n=2; Aeromonas|Rep:
           TorS-related protein - Aeromonas hydrophila subsp.
           hydrophila (strain ATCC 7966 / NCIB 9240)
          Length = 356

 Score = 34.3 bits (75), Expect = 8.3
 Identities = 19/45 (42%), Positives = 23/45 (51%)
 Frame = +2

Query: 827 ETDRYISSEVVSALTSRYIKLXIXGAXVSXIHHMVRGKPCFSTVA 961
           E DR + S VVS L S  +K    G     +HH  RG+PC   VA
Sbjct: 38  EVDRAMLSTVVSELGSNILKYAERGEITLTLHH-PRGRPCIDIVA 81


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,114,350,047
Number of Sequences: 1657284
Number of extensions: 19521534
Number of successful extensions: 33975
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33438
length of database: 575,637,011
effective HSP length: 104
effective length of database: 403,279,475
effective search space used: 157278995250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)