Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B12_e378_04.seq
         (1485 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    30   0.038
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    25   1.9  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   3.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 30.3 bits (65), Expect = 0.038
 Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
 Frame = -1

Query: 447 YVVEPLSRNFLNCILYVYLFTCYFVLYLINI--*KCVYTLYCQ---YWM*VSF-CQHIYI 286
           Y V PL   FL CI Y Y   C F+++ +++    C+Y  +C    + M + F C  I+ 
Sbjct: 135 YFVVPLF--FLLCIYYFY---CAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFF 189

Query: 285 NK*M*LYNG*IY--IELLYSPCVHF 217
           N  +       Y  + LL+ PC+++
Sbjct: 190 NMHLLFLLCLDYFTLHLLFLPCIYY 214



 Score = 23.8 bits (49), Expect = 3.3
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 5/35 (14%)
 Frame = -1

Query: 420 FLNCILYVY----LFTCYFVLY-LINI*KCVYTLY 331
           FL CI Y Y    +FT + + Y ++ I  C+Y  Y
Sbjct: 208 FLPCIYYFYSAFIIFTIHLLFYCVLIILLCIYYFY 242



 Score = 22.6 bits (46), Expect = 7.6
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = -1

Query: 393 LFTCYFVLYLINI*KCVYTLY 331
           LF C F+++ ++   C Y  Y
Sbjct: 84  LFYCPFIIFTVHFLLCTYYFY 104


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +3

Query: 933  GGSHASLRSLVXGLGFITXHP 995
            GGS   LRSL  GLG I  +P
Sbjct: 978  GGSFPLLRSLNRGLGLIPDNP 998


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 3.3
 Identities = 8/21 (38%), Positives = 15/21 (71%)
 Frame = -1

Query: 420 FLNCILYVYLFTCYFVLYLIN 358
           F+ C  ++YLFT Y++ Y ++
Sbjct: 145 FVFCY-FIYLFTVYYIYYSVH 164


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 278,809
Number of Sequences: 336
Number of extensions: 5665
Number of successful extensions: 19
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44452450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)