Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B12_e378_04.seq
         (1485 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subu...    26   2.4  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   4.2  

>AJ292755-1|CAC00630.1|  837|Anopheles gambiae integrin beta subunit
           protein.
          Length = 837

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 8/20 (40%), Positives = 17/20 (85%)
 Frame = -2

Query: 239 CTPRVYILDVVLAVLCMLIV 180
           C P+V++L +VLAV+ ++++
Sbjct: 762 CPPKVFMLGIVLAVIAVVVL 781


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 754 YKNVNRRDIVLLNKVNYFLLLQVXGNR 834
           Y+ VN  DI+L  +V   L   V GNR
Sbjct: 334 YRLVNMSDIILFGEVYVILKRMVGGNR 360


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,196,149
Number of Sequences: 2352
Number of extensions: 20574
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 173530665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)