Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B11_e370_03.seq
         (1519 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97197-1|CAA65831.1|  366|Drosophila melanogaster spliceosomal p...    34   0.59 
BT023489-1|AAY84889.1|  347|Drosophila melanogaster RE50839p pro...    34   0.59 
AE014298-857|AAF46136.1|  347|Drosophila melanogaster CG3780-PA ...    34   0.59 

>X97197-1|CAA65831.1|  366|Drosophila melanogaster spliceosomal
            protein protein.
          Length = 366

 Score = 33.9 bits (74), Expect = 0.59
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -1

Query: 1255 PKGXPAPXXFFXPXFWXPPPXVXPQTPY 1172
            P G PAP     P  W PPP   P TPY
Sbjct: 328  PPGMPAPPPRPPPTNWRPPPVPFPPTPY 355


>BT023489-1|AAY84889.1|  347|Drosophila melanogaster RE50839p protein.
          Length = 347

 Score = 33.9 bits (74), Expect = 0.59
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -1

Query: 1255 PKGXPAPXXFFXPXFWXPPPXVXPQTPY 1172
            P G PAP     P  W PPP   P TPY
Sbjct: 309  PPGMPAPPPRPPPTNWRPPPVPFPPTPY 336


>AE014298-857|AAF46136.1|  347|Drosophila melanogaster CG3780-PA
            protein.
          Length = 347

 Score = 33.9 bits (74), Expect = 0.59
 Identities = 14/28 (50%), Positives = 14/28 (50%)
 Frame = -1

Query: 1255 PKGXPAPXXFFXPXFWXPPPXVXPQTPY 1172
            P G PAP     P  W PPP   P TPY
Sbjct: 309  PPGMPAPPPRPPPTNWRPPPVPFPPTPY 336


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,020,855
Number of Sequences: 53049
Number of extensions: 1022018
Number of successful extensions: 1772
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1443
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1706
length of database: 24,988,368
effective HSP length: 88
effective length of database: 20,320,056
effective search space used: 8473463352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)