Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_B10_e362_04.seq
(1480 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 27 0.27
AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory recept... 25 1.1
AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory recept... 25 1.1
AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix... 25 1.4
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 24 3.3
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 23 4.4
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 23 4.4
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 23 4.4
AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory recept... 23 4.4
AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory recept... 23 5.8
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 27.5 bits (58), Expect = 0.27
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 2/111 (1%)
Frame = -3
Query: 788 DYFIRYIFKINVCFDFISTAILFFYD--FHCVIHRNIV*TRIQINFILLKYNFLFFTAFC 615
DYF ++ + + F S I+F F+CV+ I + Y F+ FT
Sbjct: 200 DYFTLHLLFLPCIYYFYSAFIIFTIHLLFYCVLI-------ILLCIYYFYYAFILFTVHL 252
Query: 614 MILSSISYIIHFYLEIFITIVKCCIILVIIFDMINVRDCFSSSDTVCIYLC 462
++L I Y + +L +F CC ++ ++ + + + I LC
Sbjct: 253 LLLVCIYYFYYMHL-LF-----CCAFIIFTMHLLFLLCIYYFYCALIILLC 297
>AM292377-1|CAL23189.2| 358|Tribolium castaneum gustatory receptor
candidate 56 protein.
Length = 358
Score = 25.4 bits (53), Expect = 1.1
Identities = 9/55 (16%), Positives = 26/55 (47%)
Frame = -3
Query: 605 SSISYIIHFYLEIFITIVKCCIILVIIFDMINVRDCFSSSDTVCIYLCKIVTLIP 441
S + + ++ E+F +++ CC ++ + V + F + + V + + +P
Sbjct: 82 SDLQQKLRYFEEVFSSLLSCCSVIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVP 136
>AM292342-1|CAL23154.2| 386|Tribolium castaneum gustatory receptor
candidate 21 protein.
Length = 386
Score = 25.4 bits (53), Expect = 1.1
Identities = 9/55 (16%), Positives = 26/55 (47%)
Frame = -3
Query: 605 SSISYIIHFYLEIFITIVKCCIILVIIFDMINVRDCFSSSDTVCIYLCKIVTLIP 441
S + + ++ E+F +++ CC ++ + V + F + + V + + +P
Sbjct: 82 SDLQQKLRYFEEVFSSLLSCCSVIFGCIFALKVIEVFKNIEEVDVAFRSLAVWVP 136
>AJ457831-1|CAD29886.1| 249|Tribolium castaneum helix-loop-helix
transcription factor protein.
Length = 249
Score = 25.0 bits (52), Expect = 1.4
Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = +3
Query: 162 LESDVNTNTQEERIEDVAIYELTPENSLINNVTGVN--ESNKQSGDCAEV 305
L S +N +E +++ V + E+ P N ++ N TGV + +GD A V
Sbjct: 139 LASCLNQGQKEPQVQ-VIVPEVAPNNIILGNGTGVQLVPTRLANGDIALV 187
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 23.8 bits (49), Expect = 3.3
Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 4/52 (7%)
Frame = +3
Query: 459 FTEIDAN-SIGRAETVPNINHVEYYNQYDTTFDNG---NENLKIEMDNITDA 602
+T+ D + + R + P + YYNQ +N N NLK +DNI A
Sbjct: 88 YTKADRDVDLFRGSSTPE-SPEHYYNQKTLQANNNDASNGNLKFSIDNILKA 138
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.4 bits (48), Expect = 4.4
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 794 TQDYFIRYIFKINV-CFDFISTAILFFY 714
T+ YFI Y F V C F TA++ FY
Sbjct: 50 TRTYFI-YAFVAPVKCLAFFCTALVIFY 76
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.4 bits (48), Expect = 4.4
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 794 TQDYFIRYIFKINV-CFDFISTAILFFY 714
T+ YFI Y F V C F TA++ FY
Sbjct: 283 TRTYFI-YAFVAPVKCLAFFCTALVIFY 309
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.4 bits (48), Expect = 4.4
Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -3
Query: 794 TQDYFIRYIFKINV-CFDFISTAILFFY 714
T+ YFI Y F V C F TA++ FY
Sbjct: 283 TRTYFI-YAFVAPVKCLAFFCTALVIFY 309
>AM292337-1|CAL23149.2| 452|Tribolium castaneum gustatory receptor
candidate 16 protein.
Length = 452
Score = 23.4 bits (48), Expect = 4.4
Identities = 11/62 (17%), Positives = 32/62 (51%)
Frame = -3
Query: 698 IHRNIV*TRIQINFILLKYNFLFFTAFCMILSSISYIIHFYLEIFITIVKCCIILVIIFD 519
+H+N+V N + + L+ T ++L SYI+ + ++ V+ +++ ++ +
Sbjct: 236 LHKNLVKVAKDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFFHLSDVRYVMVVYLLKN 295
Query: 518 MI 513
++
Sbjct: 296 VV 297
>AM292362-1|CAL23174.2| 398|Tribolium castaneum gustatory receptor
candidate 41 protein.
Length = 398
Score = 23.0 bits (47), Expect = 5.8
Identities = 9/19 (47%), Positives = 15/19 (78%)
Frame = +3
Query: 381 LLNTLGLHDITTNDKLIQK 437
LL+ LG+ TTN++L++K
Sbjct: 327 LLSNLGIFPKTTNEQLLRK 345
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 286,853
Number of Sequences: 336
Number of extensions: 5949
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 44247600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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