Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_B10_e362_04.seq
(1480 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0415 - 8263459-8263611,8263788-8263919,8264841-8264936,826... 37 0.035
01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132 33 0.57
01_05_0106 + 18160018-18160243,18160423-18160470,18160816-181609... 32 1.3
06_01_0549 + 3907305-3907553,3907894-3908051,3908293-3908587,390... 30 4.0
06_01_0536 + 3857426-3857674,3858015-3858172,3858414-3858708,385... 30 4.0
11_01_0470 + 3645010-3647686,3647804-3648168 30 5.4
10_05_0004 + 7717748-7717798,7718107-7718317,7719424-7720079,772... 30 5.4
03_02_0114 + 5704002-5704037,5704547-5704666,5705040-5705076,570... 30 5.4
02_04_0475 + 23229046-23229480,23230062-23231205,23232187-232323... 29 9.4
02_02_0246 - 8243584-8243696,8243848-8244415,8244500-8244685,824... 29 9.4
01_05_0049 + 17577358-17577993 29 9.4
>03_02_0415 -
8263459-8263611,8263788-8263919,8264841-8264936,
8265021-8265137,8265352-8265435,8265517-8265577,
8266217-8266266,8266544-8266633,8267539-8267757,
8269207-8269262,8269469-8269546,8269707-8269811,
8269925-8270069,8270310-8270388,8270470-8270537,
8271550-8271626,8272676-8272712,8273107-8273232,
8273770-8273805
Length = 602
Score = 37.1 bits (82), Expect = 0.035
Identities = 28/118 (23%), Positives = 59/118 (50%), Gaps = 10/118 (8%)
Frame = +3
Query: 540 DTTFDNGNENLKIEMDNITDATENHAECCEKQEIVFQQDKVNLN-----ASSNDVSMDHT 704
D ++D+G +N++ +MD+ T+ + +EC + DKV N ++ ND +
Sbjct: 303 DDSYDSGEDNIEEDMDDDTEHSSGGSECDNNIKTSVSDDKVKSNNSGTASNGNDQGLQPP 362
Query: 705 VEVIKEQNGSAYKIKTNINFEDI----PNKIILGKTTNGKR-LVAKVVKSRKPMTFLK 863
+ + +G+A K +++ E+I ++ ++ K N K L +K+ K K + L+
Sbjct: 363 KKAARTGHGAARK---DLSAEEIDYCSDDETLIEKLENSKTDLQSKITKEAKENSILQ 417
>01_03_0263 + 14397549-14412911,14413023-14413787,14413950-14414132
Length = 5436
Score = 33.1 bits (72), Expect = 0.57
Identities = 41/188 (21%), Positives = 77/188 (40%)
Frame = +3
Query: 165 ESDVNTNTQEERIEDVAIYELTPENSLINNVTGVNESNKQSGDCAEVTISDDQYKTFERN 344
+ DV T + E + EL S +N T + E +K E ++ + +T E
Sbjct: 4414 QMDVEVETVDLEDETFHVGELRASKSEHDNETIIEEDDKLILADVESSVKNVTLETLETE 4473
Query: 345 GWILLESNEKIFLLNTLGLHDITTNDKLIQKLRNESNNFTEIDANSIGRAETVPNINHVE 524
+LE E++ +G H + + + + L E N E + ET+ + HVE
Sbjct: 4474 KNTMLEDEEEM----EVG-HVVDSCENEVVCLVKEGGNKIEFE-------ETIQIVQHVE 4521
Query: 525 YYNQYDTTFDNGNENLKIEMDNITDATENHAECCEKQEIVFQQDKVNLNASSNDVSMDHT 704
+ + E + E + + D E H E +K I+ + N +N + D
Sbjct: 4522 EKTNFVPEKSSVPEKVFTEFEKLNDEVEEHVE-NDKNIILKNKKGRNTFEHTNKIGGDIQ 4580
Query: 705 VEVIKEQN 728
+ ++K++N
Sbjct: 4581 L-LVKDKN 4587
Score = 29.1 bits (62), Expect = 9.4
Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 5/126 (3%)
Frame = +3
Query: 126 STDSNVYTNSYLLESDVNTNTQEERIEDVAIYELTPENSLINNVTGV-----NESNKQSG 290
ST + ++ ++ SDV+ R +V +L E I NE+N +
Sbjct: 3033 STKDYLESDCMIVPSDVHYELSSPRNVEVEAVDLRDETFYIGETKAAKLEEKNETNTKED 3092
Query: 291 DCAEVTISDDQYKTFERNGWILLESNEKIFLLNTLGLHDITTNDKLIQKLRNESNNFTEI 470
D + + K ++ + LES K L T G + T ++ + + E +F E
Sbjct: 3093 DKMVLVEVESPVKNEDKTDLVELESFVKNVSLETFGTEENTMSEYVKEM---EVEHFDES 3149
Query: 471 DANSIG 488
+ N +G
Sbjct: 3150 NENDLG 3155
>01_05_0106 +
18160018-18160243,18160423-18160470,18160816-18160974,
18162056-18162219,18162778-18162885,18163695-18163865,
18163945-18164478,18164574-18164648,18164724-18164852,
18164975-18165049,18165129-18165338,18165529-18165681,
18165763-18165986,18166305-18166422,18166518-18166656,
18166745-18166946,18166981-18167149,18167190-18167267,
18167268-18167408,18167717-18167819,18169024-18169324,
18169450-18169518,18169602-18169626,18170946-18170975
Length = 1216
Score = 31.9 bits (69), Expect = 1.3
Identities = 19/95 (20%), Positives = 43/95 (45%)
Frame = +3
Query: 483 IGRAETVPNINHVEYYNQYDTTFDNGNENLKIEMDNITDATENHAECCEKQEIVFQQDKV 662
I + VP+ YY +T + E + I +N T +N + EK ++ ++
Sbjct: 209 INSSACVPDALRRYYYQYLSSTTEAAEEKISILRENETLLKDNESLGAEKDALIKSREVA 268
Query: 663 NLNASSNDVSMDHTVEVIKEQNGSAYKIKTNINFE 767
N ++ S++ + IKE+ + +K +++ +
Sbjct: 269 NSQIAALRKSLEAAHKDIKEKEKTVQDLKQSLDVQ 303
>06_01_0549 +
3907305-3907553,3907894-3908051,3908293-3908587,
3909088-3909339
Length = 317
Score = 30.3 bits (65), Expect = 4.0
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +3
Query: 18 AVAAALXTSGXPPGLQXIRTRLYGNLFQFQXEYILPSTDSNVYTNSYLLESDVN---TNT 188
+V + GLQ +R ++ ++ ++ D ++ LL+S V+ TN
Sbjct: 193 SVITVVSVDDTVSGLQVLRQGVWYDVPVVPNALLINMGDGMEIMSNGLLKSPVHRVVTNA 252
Query: 189 QEERIEDVAIYELTPENSLINNVTGVNESNKQSGDCAEVTISD---DQYKTFER 341
+ ER+ V Y L PE L + + K+ A++ I D Y+TF R
Sbjct: 253 ERERVSVVMFYALDPEKEL-EPAPELVDDEKRPRQYAKMKIKDYLSGFYETFAR 305
>06_01_0536 +
3857426-3857674,3858015-3858172,3858414-3858708,
3859209-3859460
Length = 317
Score = 30.3 bits (65), Expect = 4.0
Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Frame = +3
Query: 18 AVAAALXTSGXPPGLQXIRTRLYGNLFQFQXEYILPSTDSNVYTNSYLLESDVN---TNT 188
+V + GLQ +R ++ ++ ++ D ++ LL+S V+ TN
Sbjct: 193 SVITVVSVDDTVSGLQVLRQGVWYDVPVVPNALLINMGDGMEIMSNGLLKSPVHRVVTNA 252
Query: 189 QEERIEDVAIYELTPENSLINNVTGVNESNKQSGDCAEVTISD---DQYKTFER 341
+ ER+ V Y L PE L + + K+ A++ I D Y+TF R
Sbjct: 253 ERERVSVVMFYALDPEKEL-EPAPELVDDEKRPRQYAKMKIKDYLSGFYETFAR 305
>11_01_0470 + 3645010-3647686,3647804-3648168
Length = 1013
Score = 29.9 bits (64), Expect = 5.4
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Frame = +3
Query: 399 LHDITTNDKLIQKLRNESNNFTEIDANSIGRAETVPNI--NHVEYYNQYDTTFDNGN--E 566
LHD N K + L+ SNN T +++G E++ +I +H + TT N +
Sbjct: 503 LHDDIGNAKQLTYLQLSSNNITGYIPSTLGNCESLEDIELDHNVFSGSIPTTLGNIKTLK 562
Query: 567 NLKIEMDNIT 596
LK+ +N+T
Sbjct: 563 VLKLSNNNLT 572
>10_05_0004 +
7717748-7717798,7718107-7718317,7719424-7720079,
7721296-7721469,7721562-7721678,7722820-7722999,
7723244-7723290,7724068-7724401
Length = 589
Score = 29.9 bits (64), Expect = 5.4
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +3
Query: 465 EIDANSIGRAETVPNINHVEYYNQYDTTFDNGNENLKIEMDNITDATENHAECCEKQEIV 644
E D NSIG+A+ +P++N N T + +++ D+I+DA N + E+V
Sbjct: 261 EQDTNSIGKADLLPDLN----LNHLATIASTHSVSIESLDDSISDAKSNKNDLLPSLELV 316
>03_02_0114 +
5704002-5704037,5704547-5704666,5705040-5705076,
5705905-5705981,5706642-5706755,5706902-5706969,
5707051-5707129,5707367-5707511,5707627-5707731,
5707917-5707994,5708192-5708247,5708533-5708651,
5708853-5709096,5709203-5709385,5709956-5710264,
5710350-5710399,5711042-5711102,5711184-5711267,
5711461-5711577,5711665-5711831,5711938-5712010,
5712497-5712581,5712693-5712886,5713073-5713228
Length = 918
Score = 29.9 bits (64), Expect = 5.4
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +3
Query: 531 NQYDTTFDNGNENLKIEMDNITDATENHAECCEK 632
N D ++D+G +N++ +M++ T+ + +EC +K
Sbjct: 454 NDVDGSYDSGEDNIEEDMEDDTEYSSGGSECDDK 487
>02_04_0475 +
23229046-23229480,23230062-23231205,23232187-23232334,
23232776-23234225
Length = 1058
Score = 29.1 bits (62), Expect = 9.4
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +3
Query: 147 TNSYLLESDVNTNTQEERIEDVAIYELTP-ENSLINNVTGVNESNKQSGDCAEVTISDDQ 323
T S + +S V +E+ E +A+ E EN L+ + G K + A++ +DD+
Sbjct: 199 TTSKINKSAV-VGRNKEKEEILALLESDNIENLLVIPIFGFGGIGKTT--LAKLVFNDDR 255
Query: 324 YKTFERNGWILLESNEKIFLLNTLGLHDITTNDKLIQKLRNESNNFTEI 470
+TF+ WI + N + + + I + L++ SN EI
Sbjct: 256 TQTFDLRVWIYVSPNFDLKTIGRSIISQIKGQSDCLDDLQSISNCLEEI 304
>02_02_0246 -
8243584-8243696,8243848-8244415,8244500-8244685,
8244772-8244804,8244901-8244999,8245091-8245330,
8246130-8246447,8246589-8246646,8246788-8246846,
8246888-8246960,8247004-8247219,8247326-8247495
Length = 710
Score = 29.1 bits (62), Expect = 9.4
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Frame = +3
Query: 540 DTTFDNGNENLKIEMDNITDATENHAECCEKQEIVFQQDKVNLNASSNDVSMDHTVEVIK 719
+ T + +EN E ++TD ENH E EI + ++ + +S D S ++ +
Sbjct: 552 EATRSSASEN---ENSSMTDKEENHDEVHTNCEIKKRTEEHCIQINSEDSSSTYSQRTMN 608
Query: 720 E--QNGSAYKIKTNINFEDIPNKIILGKTTNGKRLVAK 827
Q GS +K + NI IP++ + K N + + K
Sbjct: 609 ATVQTGSPHKTEENIT-RRIPDEYYI-KEANKRVTIHK 644
>01_05_0049 + 17577358-17577993
Length = 211
Score = 29.1 bits (62), Expect = 9.4
Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 324 YKTFERNGWILLESNEKIFLLNTLGLHDITTN-DKLIQKLRNESNNFTE 467
+++F+RNG L E LL +LGL T D LIQ+ SN E
Sbjct: 69 FRSFDRNGDGSLTQLELGSLLRSLGLKPSTDELDSLIQRADTNSNGLIE 117
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,519,297
Number of Sequences: 37544
Number of extensions: 586331
Number of successful extensions: 1108
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4722057956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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