Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_B10_e362_04.seq
(1480 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.047
SB_39521| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.58
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.3
SB_30230| Best HMM Match : CH (HMM E-Value=0.0035) 31 1.8
SB_35002| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.1
SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045) 30 4.1
SB_32076| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 30 5.4
SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_34949| Best HMM Match : ANF_receptor (HMM E-Value=0) 29 7.2
SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.2
SB_35329| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 29 7.2
SB_58015| Best HMM Match : rve (HMM E-Value=0.00087) 29 9.5
SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91) 29 9.5
SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_4148| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 9.5
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 29 9.5
>SB_54131| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3160
Score = 36.7 bits (81), Expect = 0.047
Identities = 56/248 (22%), Positives = 108/248 (43%), Gaps = 8/248 (3%)
Frame = +3
Query: 105 QXEYILPSTDSNVYTNSYLLESDVNTNTQE-ERIEDVAIYELTPENSLINNVTGVNESNK 281
+ EY ST+ + ++ +E +TN + +V + + T + L++N G E K
Sbjct: 1509 EVEYDAKSTNIDKLVSNNEVELAKSTNIDKLVSNNEVELAKSTNIDKLVSNNKG--ELAK 1566
Query: 282 QSGDCAEVTISDDQYKTFERNGWILLESNEKIFLLNTLGLHDITTNDKL-IQKLRN---- 446
+ +S+++ + L SN ++ L + + + +N+++ + K N
Sbjct: 1567 STN--INKLVSNNEVVLAKSTNIDKLVSNNEVELAKSTNIDKLVSNNEVELAKSTNIDKL 1624
Query: 447 ESNNFTEIDANSIGRAETVPNINHVEYYNQYDTTFDNGNENLKIEMDNITDATENHAECC 626
SNN E DA S + V N N VE T D N ++E+ T+ + +
Sbjct: 1625 VSNNEVEYDAKSTNIDKLVSN-NEVELAKS--TNIDKLVSNNEVELAKSTNIDKLVSN-- 1679
Query: 627 EKQEIVFQQDKVNLNASSNDVSMDHTVEVIK--EQNGSAYKIKTNINFEDIPNKIILGKT 800
+ E + ++ S+N+V + + + K NG TNI+ N++ L K+
Sbjct: 1680 NEDEYDAKSTNIDKLVSNNEVELAKSTNIDKLVSNNGVELAKSTNIDKLVSNNEVELAKS 1739
Query: 801 TNGKRLVA 824
TN +LV+
Sbjct: 1740 TNINKLVS 1747
Score = 36.3 bits (80), Expect = 0.062
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 7/163 (4%)
Frame = +3
Query: 357 LESNEKIFLLNTLGLHDITTNDKLIQKLRNESNNFTEIDANSIGRAETVPNINHVEYYNQ 536
L SN ++ L + + + +N++++ +S N ++ +N+ G NI+ + N+
Sbjct: 1436 LVSNNEVVLAKSTNIDKLVSNNEVVHA---KSTNIDKLVSNNKGELAKSTNIDKLVSNNE 1492
Query: 537 Y----DTTFDNGNENLKIEMDNITDATENHAECCEKQEI-VFQQDKVNLNASSNDVSMDH 701
T D N ++E D + N + E+ + + ++ S+N+V +
Sbjct: 1493 VVLAKSTNIDKLVSNNEVEYDA---KSTNIDKLVSNNEVELAKSTNIDKLVSNNEVELAK 1549
Query: 702 TVEVIK--EQNGSAYKIKTNINFEDIPNKIILGKTTNGKRLVA 824
+ + K N TNIN N+++L K+TN +LV+
Sbjct: 1550 STNIDKLVSNNKGELAKSTNINKLVSNNEVVLAKSTNIDKLVS 1592
Score = 32.3 bits (70), Expect = 1.0
Identities = 39/180 (21%), Positives = 82/180 (45%), Gaps = 6/180 (3%)
Frame = +3
Query: 303 VTISDDQYKTFERNGWILLESNEKIFLLNTLGLHDITTNDKLIQKLRNESNNFTEIDANS 482
V+ ++D+Y N L+ +NE + L + + + +N+ + +L +N + N
Sbjct: 1677 VSNNEDEYDAKSTNIDKLVSNNE-VELAKSTNIDKLVSNNGV--ELAKSTNIDKLVSNNE 1733
Query: 483 IGRAETVPNINHVEYYNQYD----TTFDNGNENLKIEMDNITDATENHAECCEKQEIVFQ 650
+ A++ NIN + N+ + T D N ++E+ T+ + + + E +
Sbjct: 1734 VELAKST-NINKLVSNNEVELAKSTNIDKLVSNNEVELAKSTNIDKLVSN--NEDEYDAK 1790
Query: 651 QDKVNLNASSNDVSMDHTVEVIK--EQNGSAYKIKTNINFEDIPNKIILGKTTNGKRLVA 824
++ S+N+V + + + K NG TNI+ N++ L K+TN +LV+
Sbjct: 1791 STNIDKLVSNNEVELAKSTNIDKLVSNNGVELAKSTNIDKLVSNNEVELAKSTNINKLVS 1850
>SB_39521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 33.1 bits (72), Expect = 0.58
Identities = 19/69 (27%), Positives = 38/69 (55%)
Frame = -3
Query: 713 DFHCVIHRNIV*TRIQINFILLKYNFLFFTAFCMILSSISYIIHFYLEIFITIVKCCIIL 534
D+H HR+ + I IN + + + +I+ ++ IIHFYL + +T++ I++
Sbjct: 10 DYH---HRHHI-IAIIINKLSSSLSHYHHHHYIIIIIILTSIIHFYLTVTVTVIVIVIVI 65
Query: 533 VIIFDMINV 507
VI+ ++ V
Sbjct: 66 VIVIVIVIV 74
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 31.9 bits (69), Expect = 1.3
Identities = 23/72 (31%), Positives = 34/72 (47%)
Frame = +3
Query: 162 LESDVNTNTQEERIEDVAIYELTPENSLINNVTGVNESNKQSGDCAEVTISDDQYKTFER 341
+E D QEE++ED L E L +N T E +Q D T+S +Q + E
Sbjct: 3785 IEQD-GQEVQEEQLEDNPTVPLEQEEQLEDNPTASLEQEEQLED--NPTVSLEQEEQLED 3841
Query: 342 NGWILLESNEKI 377
N + LE E++
Sbjct: 3842 NPTVPLEQEEQL 3853
Score = 31.1 bits (67), Expect = 2.3
Identities = 24/78 (30%), Positives = 37/78 (47%)
Frame = +3
Query: 189 QEERIEDVAIYELTPENSLINNVTGVNESNKQSGDCAEVTISDDQYKTFERNGWILLESN 368
QEE++ED L E L +N T E +Q D T+S +Q + E N + LE
Sbjct: 3849 QEEQLEDNPTVSLEQEEQLEDNPTVPLEQEEQLED--NPTVSLEQEEQLEDNPTVPLEQE 3906
Query: 369 EKIFLLNTLGLHDITTND 422
E++ T+ L + N+
Sbjct: 3907 EQLEDNPTVPLEEHIDNE 3924
Score = 30.7 bits (66), Expect = 3.1
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +3
Query: 189 QEERIEDVAIYELTPENSLINNVTGVNESNKQSGDCAEVTISDDQYKTFERNGWILLESN 368
QEE++ED L E L +N T E +Q D T+S +Q + E N + LE
Sbjct: 3821 QEEQLEDNPTVSLEQEEQLEDNPTVPLEQEEQLED--NPTVSLEQEEQLEDNPTVPLEQE 3878
Query: 369 EKI 377
E++
Sbjct: 3879 EQL 3881
Score = 29.1 bits (62), Expect = 9.5
Identities = 23/91 (25%), Positives = 41/91 (45%)
Frame = +3
Query: 105 QXEYILPSTDSNVYTNSYLLESDVNTNTQEERIEDVAIYELTPENSLINNVTGVNESNKQ 284
Q E + + +++ L ++ + QEE++ED L E L +N T E +Q
Sbjct: 3807 QEEQLEDNPTASLEQEEQLEDNPTVSLEQEEQLEDNPTVPLEQEEQLEDNPTVSLEQEEQ 3866
Query: 285 SGDCAEVTISDDQYKTFERNGWILLESNEKI 377
D T+ +Q + E N + LE E++
Sbjct: 3867 LED--NPTVPLEQEEQLEDNPTVSLEQEEQL 3895
>SB_30230| Best HMM Match : CH (HMM E-Value=0.0035)
Length = 2440
Score = 31.5 bits (68), Expect = 1.8
Identities = 19/65 (29%), Positives = 34/65 (52%)
Frame = +3
Query: 651 QDKVNLNASSNDVSMDHTVEVIKEQNGSAYKIKTNINFEDIPNKIILGKTTNGKRLVAKV 830
+DK N+ + +S D + I + SA+ I +++F+D+ GKTT +L K
Sbjct: 1903 RDKNNIASGIEPLSPDQSESSIDKSLQSAHGISFDVSFDDVSP----GKTTRKPKLAPKN 1958
Query: 831 VKSRK 845
++ RK
Sbjct: 1959 IRLRK 1963
>SB_35002| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 907
Score = 30.7 bits (66), Expect = 3.1
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 590 IIHFYLEIFITIVKCCIILVIIFDMIN 510
+++ Y F T+V CC VI DMIN
Sbjct: 564 VVNIYWGFFSTVVACCTFYVICQDMIN 590
>SB_54719| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.045)
Length = 782
Score = 30.3 bits (65), Expect = 4.1
Identities = 19/90 (21%), Positives = 44/90 (48%)
Frame = +3
Query: 609 NHAECCEKQEIVFQQDKVNLNASSNDVSMDHTVEVIKEQNGSAYKIKTNINFEDIPNKII 788
+ +EC +++ +VF++++V + AS+ + D E+ ++ ++ + P K +
Sbjct: 75 SQSECSKEESVVFKRNEVKMAASTESIRNDFLQEISIDKENLLPQMPSIGTPGRFPLKPV 134
Query: 789 LGKTTNGKRLVAKVVKSRKPMTFLKDYPKP 878
G T+ K+ ++VK R + KP
Sbjct: 135 QGNVTSIKK---QLVKKRALFATSSEISKP 161
>SB_32076| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 2352
Score = 29.9 bits (64), Expect = 5.4
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 807 GKRLVAKVVKSRKPMTFLKDYPKPKLSGTD 896
G+++V K+V SR +DYP+ + GTD
Sbjct: 941 GRKVVKKIVHSRLARKTPRDYPRARAHGTD 970
>SB_35263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 314
Score = 29.5 bits (63), Expect = 7.2
Identities = 31/134 (23%), Positives = 53/134 (39%), Gaps = 3/134 (2%)
Frame = +3
Query: 387 NTLGLHDITTNDKLIQKLRNESNNFTEIDANSIGRAETVPNINHVEYYNQ-YDTTFDNGN 563
NT + + N+K NN T + N+ T N N + N + T DN N
Sbjct: 115 NTSDNNKTSDNNKTSDNNNTSDNNNTSDNNNTSDNNNTSDNNNTSDNNNSDNNNTSDNNN 174
Query: 564 ENLKIEMDNITDA--TENHAECCEKQEIVFQQDKVNLNASSNDVSMDHTVEVIKEQNGSA 737
+ + +NI+D T ++ + I + N N+ +N++S ++ +I N
Sbjct: 175 TS---DNNNISDNNNTSDNNNTSDNNNISDNNNSDNNNSDNNNISDNN--NIIDNNNSDN 229
Query: 738 YKIKTNINFEDIPN 779
N N D N
Sbjct: 230 NNTSDNNNTSDNNN 243
>SB_34949| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 879
Score = 29.5 bits (63), Expect = 7.2
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -3
Query: 638 FLFFTAFCMILSSISYI-IHFYLE-IFITIVKCCIILVIIFDMI 513
F+ F+ + M+LS I+Y + LE +ITIV C LVI + ++
Sbjct: 760 FIGFSMYVMLLSWIAYYPVDSALEGYYITIVACATALVIAYGLL 803
>SB_49836| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 29.5 bits (63), Expect = 7.2
Identities = 34/159 (21%), Positives = 64/159 (40%), Gaps = 3/159 (1%)
Frame = +3
Query: 303 VTISDDQYKTFERNGWILLESNE-KIFLLNTLGLHDITTNDKLIQKLRNESNNFTEIDAN 479
++ + ++Y +G + + SN K + G +I++N K R+ N + N
Sbjct: 3 ISSNRNKYDKQRSSGNMNISSNRNKYDKQRSSGNMNISSNRNKNDKQRSSGNMNISSNRN 62
Query: 480 SIGRAETVPNINHVEYYNQYDTTFDNGNENLKIEMDNITD--ATENHAECCEKQEIVFQQ 653
+ + N+N N+YD +GN N+ +N ++ N + Q+
Sbjct: 63 KYDKQRSSGNMNISSNRNKYDKQRSSGNMNISSNRNNDDKQRSSGNMNISSNRNNDDKQR 122
Query: 654 DKVNLNASSNDVSMDHTVEVIKEQNGSAYKIKTNINFED 770
N+N SSN D K+++ I +N N D
Sbjct: 123 SSGNMNISSNRNKND------KQRSSGNMNISSNRNKND 155
>SB_48386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 717
Score = 29.5 bits (63), Expect = 7.2
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 6/111 (5%)
Frame = +3
Query: 414 TNDKLIQKLRNESNNFTEIDANSIGRAETV----PNINHVEYYNQYDTTFDNGNENLKIE 581
+ +K +L E T ID S+ AE N E DTT D L+ +
Sbjct: 241 SEEKKQLELEIEHVRRTSIDTLSMKEAELQRVRKTAANFQEAVKVDDTTIDKLRALLEEK 300
Query: 582 MDNITDATENHAECCEKQEIVFQQDKVNLNASSNDVS--MDHTVEVIKEQN 728
+ ++ E + +QE F++DK+NL + ++ MD E + N
Sbjct: 301 EYELFESREKYQHQLREQEANFEEDKLNLQSQLEGLTADMDKITESVSRTN 351
>SB_35329| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 660
Score = 29.5 bits (63), Expect = 7.2
Identities = 23/90 (25%), Positives = 40/90 (44%)
Frame = +3
Query: 369 EKIFLLNTLGLHDITTNDKLIQKLRNESNNFTEIDANSIGRAETVPNINHVEYYNQYDTT 548
+KIF N + + N L + + +I S+ + P + VE Y YD T
Sbjct: 198 KKIFTGNLMNAWHVVVNHTLDK--HPPPTRYVKIFVESVYSSYFPPGMK-VELYGYYDHT 254
Query: 549 FDNGNENLKIEMDNITDATENHAECCEKQE 638
+ G N KIE D I+ ++ + +++E
Sbjct: 255 HELGMGNQKIEDDEISASSVLAGQFFQEEE 284
>SB_58015| Best HMM Match : rve (HMM E-Value=0.00087)
Length = 1333
Score = 29.1 bits (62), Expect = 9.5
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 8/98 (8%)
Frame = +3
Query: 537 YDTTFDNGNENLKIEMDNITDATE-NH-AECCEKQEIVFQQ--DKVNLNASSNDVSMDH- 701
Y+ N +N+K + N+++ATE NH + C+ +E+ +Q D + S +D S+D
Sbjct: 187 YERYIFNSQKNVKHLVKNVSNATEKNHFSSMCKSKEVPPKQMHDLEKDSVSESDDSIDEL 246
Query: 702 ---TVEVIKEQNGSAYKIKTNINFEDIPNKIILGKTTN 806
++ K + + N+ +DI K+ G N
Sbjct: 247 FFGEIDSTKSDANELF-VTLNVENKDIKFKVDTGAQCN 283
>SB_48165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 483
Score = 29.1 bits (62), Expect = 9.5
Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 3/182 (1%)
Frame = +3
Query: 204 EDVAIYELTPENSLINNVTGVNESNKQSGDCAEVTISDDQYKTFERNGWILLESNEKIFL 383
ED +Y++T E+ + N+T ++Q D T +R + + + ++
Sbjct: 144 EDRQVYDITAEDRQVYNITA---EDRQVYDITTEDRQVYDITTEDRQVYDITTEDRHVYN 200
Query: 384 LNT--LGLHDITTNDKLIQKLRNESNNFTEIDANSIGRAETVPNINHVEYYNQYD-TTFD 554
+ T ++DI+ D+ + + E + I A + HV D +D
Sbjct: 201 ITTEDWQVYDISAEDRQVYDITTEDRHVYNITAEDRQVYDITTEDRHVYNITAEDRQVYD 260
Query: 555 NGNENLKIEMDNITDATENHAECCEKQEIVFQQDKVNLNASSNDVSMDHTVEVIKEQNGS 734
E+ + NIT A + HA E + + ++ V VE K + G
Sbjct: 261 ITTEDRHVY--NIT-AEDRHATITEDNITIGDRQVYDITTEDRQVYGPQFVEFNKRRFGD 317
Query: 735 AY 740
+
Sbjct: 318 RF 319
>SB_16065| Best HMM Match : zf-C3HC4 (HMM E-Value=0.91)
Length = 399
Score = 29.1 bits (62), Expect = 9.5
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Frame = -2
Query: 390 CLTEIFFHLILKVSSHFFQKFCIGHHLL*PQH---NHQTAYYFH*LQSHYLLVNFQVLIH 220
C+T HL +V+SHF + I HH L P +H + Y H H V +
Sbjct: 176 CITHQALHLTKRVASHFLR--YISHHALLPTFRVTSHFSRYTSHHALHHTSRVASHTTRY 233
Query: 219 ILQHLL 202
I H L
Sbjct: 234 ISHHAL 239
>SB_57704| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 29.1 bits (62), Expect = 9.5
Identities = 14/57 (24%), Positives = 31/57 (54%)
Frame = -3
Query: 614 MILSSISYIIHFYLEIFITIVKCCIILVIIFDMINVRDCFSSSDTVCIYLCKIVTLI 444
+I+ I II + I + I+ ++++IIF ++ V CF + +C L ++ ++
Sbjct: 10 IIIIIIIIIIIIIIIIIVIIIVIVVVIIIIFIVVVVVFCFINIYVICDILSPVLMMM 66
>SB_20263| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.1 bits (62), Expect = 9.5
Identities = 26/115 (22%), Positives = 43/115 (37%), Gaps = 1/115 (0%)
Frame = +3
Query: 249 NNVTGVNESNKQSGDCAEVTISDDQYKTFERNGWILLESNEKIFLLNTLG-LHDITTNDK 425
NN N N S D + ++D Y + NG N+ + N +D N+
Sbjct: 18 NNDNYDNNGNNDSNDNGDNCDNNDNYDNNDNNGNNDNNDNDDNYDNNDNNDNNDNNDNND 77
Query: 426 LIQKLRNESNNFTEIDANSIGRAETVPNINHVEYYNQYDTTFDNGNENLKIEMDN 590
N NN + ++ G + N N+ + D+ +NGN + DN
Sbjct: 78 NNDNNDNNDNNDNNDNYDNNGNNDNNDNYNNYDNNGNNDSNDNNGNNDNNDNYDN 132
>SB_19075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6500
Score = 29.1 bits (62), Expect = 9.5
Identities = 21/76 (27%), Positives = 35/76 (46%)
Frame = +3
Query: 552 DNGNENLKIEMDNITDATENHAECCEKQEIVFQQDKVNLNASSNDVSMDHTVEVIKEQNG 731
D GN+ K DNI + + + ++ F + + N++SN M TV+ I E+ G
Sbjct: 6114 DKGNKPPKDIADNIAKKSVAEMKPVPEVDMAFVINARSTNSASNFEKMKDTVKAIIEEYG 6173
Query: 732 SAYKIKTNINFEDIPN 779
S + I D P+
Sbjct: 6174 SRQIKYSLIQVGDTPS 6189
>SB_4148| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 201
Score = 29.1 bits (62), Expect = 9.5
Identities = 24/126 (19%), Positives = 52/126 (41%)
Frame = +3
Query: 444 NESNNFTEIDANSIGRAETVPNINHVEYYNQYDTTFDNGNENLKIEMDNITDATENHAEC 623
N S+N D+N+ + N N+ N ++ +N N N ++ + + N++
Sbjct: 18 NNSSNNNNNDSNNSSNNSSNNNSNNNNRNNSSNSNSNNNNNNNNRNNNSNNNNSNNNSNN 77
Query: 624 CEKQEIVFQQDKVNLNASSNDVSMDHTVEVIKEQNGSAYKIKTNINFEDIPNKIILGKTT 803
+ + N N +SN+ S ++ N S ++N N + N I + +
Sbjct: 78 NNRSNRNNNSNNNNRNNNSNNNSNNNNRSNNNRNNSSNNNNRSNRNNDS--NNINISRNN 135
Query: 804 NGKRLV 821
+ R++
Sbjct: 136 SNSRVI 141
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 29.1 bits (62), Expect = 9.5
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 1251 PLXPXTGGAAH*PA*AXAXXGPPPGXP 1331
P+ P TGG P A A GPPP P
Sbjct: 143 PIAPATGGPPPPPPIAPATGGPPPPPP 169
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,371,211
Number of Sequences: 59808
Number of extensions: 681124
Number of successful extensions: 1669
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1622
length of database: 16,821,457
effective HSP length: 85
effective length of database: 11,737,777
effective search space used: 4777275239
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -