Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B10_e362_04.seq
         (1480 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    27   1.0  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    25   4.2  
AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1 pro...    24   9.7  

>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 27.5 bits (58), Expect = 1.0
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -2

Query: 651  VEIQFLVFHSILHDSQ*HQLYYPFLS*DFHYHCQMLYH 538
            ++  +L+ H   HD     L YPF S  +HYH   LY+
Sbjct: 1277 IDYAYLMKHIEQHDYW-SALVYPFASETYHYHQFNLYY 1313


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 25.4 bits (53), Expect = 4.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -2

Query: 318 HHLL*PQHNHQTAYYFH*LQSHYLLVNFQVLIH 220
           HH   PQ  HQ  Y+ H    H+  V F+  +H
Sbjct: 313 HHQHQPQQQHQQQYHSH---PHHTPVQFKTELH 342


>AJ439353-12|CAD27934.1|  160|Anopheles gambiae putative MLC1
           protein protein.
          Length = 160

 Score = 24.2 bits (50), Expect = 9.7
 Identities = 10/41 (24%), Positives = 24/41 (58%)
 Frame = +3

Query: 648 QQDKVNLNASSNDVSMDHTVEVIKEQNGSAYKIKTNINFED 770
           Q D ++L  +   ++++ T+E+I +  G+  + +  I FE+
Sbjct: 27  QMDAMDLGNALRALNLNPTIELIGKMGGTQKRGEKKIKFEE 67


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,242,548
Number of Sequences: 2352
Number of extensions: 22140
Number of successful extensions: 35
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 172717875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)