Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B10_e362_04.seq
         (1480 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    24   3.8  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   3.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   3.8  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    23   6.7  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    23   8.9  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
 Frame = +3

Query: 114 YILPSTDSNVYTNSYLLESDVN--TNTQEERIEDVAIYELT 230
           Y  PS+++  Y N+  L    N   + Q ER++DV   +LT
Sbjct: 266 YNSPSSENLYYVNTESLMKSENQGNDVQYERVQDVFDSQLT 306


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 519 VEYYNQYDTTFDNG 560
           + Y+ Q+DTT +NG
Sbjct: 460 ITYFEQFDTTINNG 473


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 3.8
 Identities = 7/14 (50%), Positives = 11/14 (78%)
 Frame = +3

Query: 519 VEYYNQYDTTFDNG 560
           + Y+ Q+DTT +NG
Sbjct: 460 ITYFEQFDTTINNG 473


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 6.7
 Identities = 10/21 (47%), Positives = 15/21 (71%)
 Frame = +2

Query: 797 NYEWEKISRKGGKIKETNDIS 859
           ++E E+ S +G KIKE+N  S
Sbjct: 442 HWELEEESLQGSKIKESNSCS 462


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.6 bits (46), Expect = 8.9
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = +3

Query: 759 NFEDIPNKIILGKTTNGKRLVAKVVKSRKPMTFLKDYPKP 878
           NFED     +  +  NGK+L   + ++ + + +L  +  P
Sbjct: 32  NFEDRVTMYVYEEIINGKKLTEIINETHENVKYLPGHKLP 71


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 342,796
Number of Sequences: 438
Number of extensions: 6638
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 61
effective length of database: 119,625
effective search space used: 51558375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)