Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B07_e338_03.seq
         (1545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    27   0.37 
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    23   8.0  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 27.1 bits (57), Expect = 0.37
 Identities = 15/59 (25%), Positives = 26/59 (44%)
 Frame = -2

Query: 860 HFQHVWFTPSCVYHFCIEGL*VLPVSHRYFQWPIG*TKCASRCAPSVLQAITLKLPSLH 684
           H+  V+FT   V H  +    VL + +R+    +  TK    CA      +  ++ +LH
Sbjct: 524 HYLRVFFTVFNVVHCYLASELVLMLKNRFVTLNVQLTKLTKNCATKAQSVVLGRICTLH 582


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 22.6 bits (46), Expect = 8.0
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = -3

Query: 541 NSIDQVDEPLMFKGPQSHNLYYQEHFQRITRI 446
           N    +DE L  +  +  NL+   +FQ +  I
Sbjct: 110 NKFQYIDEKLKTRDQKERNLFKNAYFQLVLSI 141


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 297,265
Number of Sequences: 336
Number of extensions: 6537
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 60
effective length of database: 102,425
effective search space used: 46500950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)