Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= 030723E4_B07_e338_03.seq
(1545 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81098-1|CAB03183.1| 581|Caenorhabditis elegans Hypothetical pr... 72 1e-12
Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical pr... 31 2.2
Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical pr... 31 2.2
DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping... 31 2.2
AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical ... 31 2.2
AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical ... 31 2.2
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 31 2.9
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 31 2.9
AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical ... 29 8.8
>Z81098-1|CAB03183.1| 581|Caenorhabditis elegans Hypothetical
protein K07A12.1 protein.
Length = 581
Score = 72.1 bits (169), Expect = 1e-12
Identities = 54/215 (25%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Frame = +2
Query: 179 HIEGMLELVDTYFIMEEYEQAELMLEMIIGCLQYTAHSNFTLGNPDVRLEYKYLENRPFF 358
H+ +L + + E++ ++E I + A + F + R++Y ENR F+
Sbjct: 170 HLNSILMMAHMNRMNEDFNTGADLIERGIWYVDQYAAATFEPFHWKHRMDYLDYENRAFY 229
Query: 359 TTILRYIYLLSNKSHHRTALELSKMLLNLDP-SDPLKMFLIIEIVALRAFEHQWLVDLID 535
+ R++ ++K TA +KM+ LDP DPL + +I+I AL+A ++QW+++ +
Sbjct: 230 LLLHRHMLNAAHKRCWETAWNTAKMIFKLDPVKDPLAIISLIDIFALKAKQYQWIINTFE 289
Query: 536 TIRGKEKLPEFIVSLKYSYALARFHIAYKKKGDMSEVDTLLQETILDCPYVAKAILKLLP 715
+ +KL + + YS ALARF A K D + L I P V ++ +L
Sbjct: 290 AAKKFKKL-HLLPNWPYSVALARFFTA-KTDEDREIAENDLCTAIRHFPSVVVQLMDILQ 347
Query: 716 GVPKERIEKHILFNQLATENIGVRLVELINLLCKN 820
P + + +N L L+ + K+
Sbjct: 348 IHPDSAVMNCKMLTSFVADNERDSLKLLVKVYAKH 382
>Z82269-7|CAB05204.2| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 56 GLQXIRHEAGKYQKV---HGAFLTIIRNTNINLLLSREQILGSLHIEGMLELVDTYFIME 226
G+Q I+ + G ++ V T T+I+ L + Q L ++ E + D YF +
Sbjct: 674 GIQSIQGDGGAWEDVWFREQLAATTTAGTSISSLAASNQELAMINREET-PIEDPYFKQQ 732
Query: 227 EYEQAELMLEMIIGCLQYT 283
Y++A+ +I C Q+T
Sbjct: 733 AYQKAQKAQSLIPACSQWT 751
>Z82269-6|CAB05206.3| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 56 GLQXIRHEAGKYQKV---HGAFLTIIRNTNINLLLSREQILGSLHIEGMLELVDTYFIME 226
G+Q I+ + G ++ V T T+I+ L + Q L ++ E + D YF +
Sbjct: 697 GIQSIQGDGGAWEDVWFREQLAATTTAGTSISSLAASNQELAMINREET-PIEDPYFKQQ 755
Query: 227 EYEQAELMLEMIIGCLQYT 283
Y++A+ +I C Q+T
Sbjct: 756 AYQKAQKAQSLIPACSQWT 774
>DQ143943-1|AAZ73241.1| 770|Caenorhabditis elegans RNA-decapping
protein protein.
Length = 770
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 56 GLQXIRHEAGKYQKV---HGAFLTIIRNTNINLLLSREQILGSLHIEGMLELVDTYFIME 226
G+Q I+ + G ++ V T T+I+ L + Q L ++ E + D YF +
Sbjct: 658 GIQSIQGDGGAWEDVWFREQLAATTTAGTSISSLAASNQELAMINREET-PIEDPYFKQQ 716
Query: 227 EYEQAELMLEMIIGCLQYT 283
Y++A+ +I C Q+T
Sbjct: 717 AYQKAQKAQSLIPACSQWT 735
>AL021488-8|CAJ43919.1| 786|Caenorhabditis elegans Hypothetical
protein F52G2.1b protein.
Length = 786
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 56 GLQXIRHEAGKYQKV---HGAFLTIIRNTNINLLLSREQILGSLHIEGMLELVDTYFIME 226
G+Q I+ + G ++ V T T+I+ L + Q L ++ E + D YF +
Sbjct: 674 GIQSIQGDGGAWEDVWFREQLAATTTAGTSISSLAASNQELAMINREET-PIEDPYFKQQ 732
Query: 227 EYEQAELMLEMIIGCLQYT 283
Y++A+ +I C Q+T
Sbjct: 733 AYQKAQKAQSLIPACSQWT 751
>AL021488-7|CAJ43918.1| 809|Caenorhabditis elegans Hypothetical
protein F52G2.1a protein.
Length = 809
Score = 31.1 bits (67), Expect = 2.2
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Frame = +2
Query: 56 GLQXIRHEAGKYQKV---HGAFLTIIRNTNINLLLSREQILGSLHIEGMLELVDTYFIME 226
G+Q I+ + G ++ V T T+I+ L + Q L ++ E + D YF +
Sbjct: 697 GIQSIQGDGGAWEDVWFREQLAATTTAGTSISSLAASNQELAMINREET-PIEDPYFKQQ 755
Query: 227 EYEQAELMLEMIIGCLQYT 283
Y++A+ +I C Q+T
Sbjct: 756 AYQKAQKAQSLIPACSQWT 774
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 30.7 bits (66), Expect = 2.9
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +2
Query: 122 IRNTNINLLLSREQILGSLHIEGMLELVDTYFIMEEYEQAELMLEMIIGCLQYTAHSNFT 301
I++ + ++LS + L +L + G L + F E + ++ C Q T +
Sbjct: 214 IQDRGVQIILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQN 273
Query: 302 LGNPDVRLEYKYLENRPFFTTILRYIYLLSNKSHHRTALELS 427
+ N LEY + N + R + L SH+ LELS
Sbjct: 274 IANGATALEYLCMSNCNQISD--RSLVSLGQHSHNLKVLELS 313
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 30.7 bits (66), Expect = 2.9
Identities = 25/102 (24%), Positives = 43/102 (42%)
Frame = +2
Query: 122 IRNTNINLLLSREQILGSLHIEGMLELVDTYFIMEEYEQAELMLEMIIGCLQYTAHSNFT 301
I++ + ++LS + L +L + G L + F E + ++ C Q T +
Sbjct: 214 IQDRGVQIILSNCKSLDTLILRGCEGLTENVFGSVEAHMGAIKKLNLLQCFQLTDITVQN 273
Query: 302 LGNPDVRLEYKYLENRPFFTTILRYIYLLSNKSHHRTALELS 427
+ N LEY + N + R + L SH+ LELS
Sbjct: 274 IANGATALEYLCMSNCNQISD--RSLVSLGQHSHNLKVLELS 313
>AC006682-1|AAF39956.3| 1853|Caenorhabditis elegans Hypothetical
protein R193.2 protein.
Length = 1853
Score = 29.1 bits (62), Expect = 8.8
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = -1
Query: 771 SVANWLNKMCFSMRSFGTPGNNFKIAFATYGQ 676
+V N+LN ++ +F + GN+ K+A TYG+
Sbjct: 1719 NVQNFLNSFITNVGNFTSTGNDTKMAVVTYGR 1750
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,763,258
Number of Sequences: 27780
Number of extensions: 620288
Number of successful extensions: 1285
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 12,740,198
effective HSP length: 85
effective length of database: 10,378,898
effective search space used: 4452547242
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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