Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= 030723E4_B06_e330_04.seq
         (1411 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39853-3|AAT92078.1|  151|Caenorhabditis elegans S. cerevisiae f...    79   1e-14
U39853-4|AAK39224.1|  138|Caenorhabditis elegans S. cerevisiae f...    75   9e-14
U39999-11|AAA81109.1|  143|Caenorhabditis elegans S. cerevisiae ...    73   5e-13
Z68134-1|CAA92226.2|  492|Caenorhabditis elegans Hypothetical pr...    35   0.12 
Z96100-6|CAB76719.1|  222|Caenorhabditis elegans Hypothetical pr...    26   0.70 
AL033124-1|CAB76736.1|  222|Caenorhabditis elegans Hypothetical ...    26   0.70 
AL110480-2|CAB60326.1|  244|Caenorhabditis elegans Hypothetical ...    26   3.3  
U41025-3|AAA82348.1|  244|Caenorhabditis elegans Hypothetical pr...    30   4.5  
AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical ...    29   6.0  

>U39853-3|AAT92078.1|  151|Caenorhabditis elegans S. cerevisiae
           fis1-related protein2, isoform b protein.
          Length = 151

 Score = 78.6 bits (185), Expect = 1e-14
 Identities = 40/123 (32%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
 Frame = +1

Query: 154 VLDETVSSEDLQKFERIFHEQLHQGKVTHKAQFEYAWCLVRSKYPTDIRKGILLLKELFN 333
           +L+E  +   L      +  Q  +G  +  + F +A  ++ SK   D+++GI+ L++L  
Sbjct: 6   ILEERTNPAVLMNAREQYMRQCARGDPSAASTFAFAHAMIGSKNKLDVKEGIVCLEKLLR 65

Query: 334 SHAE--GKRDYLFYLAIGNARIKEYNKALHYVKAFLEIEPANQQVLALERQINKRMEKEG 507
              +   KR+Y++YLA+ +ARIK+Y+ AL Y+   L+ E  NQQ   L+  I   M  +G
Sbjct: 66  DDEDRTSKRNYVYYLAVAHARIKQYDLALGYIDVLLDAEGDNQQAKTLKESIKSAMTHDG 125

Query: 508 LIG 516
           LIG
Sbjct: 126 LIG 128


>U39853-4|AAK39224.1|  138|Caenorhabditis elegans S. cerevisiae
           fis1-related protein2, isoform a protein.
          Length = 138

 Score = 75.4 bits (177), Expect = 9e-14
 Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 2/106 (1%)
 Frame = +1

Query: 205 FHEQLHQGKVTHKAQFEYAWCLVRSKYPTDIRKGILLLKELFNSHAE--GKRDYLFYLAI 378
           +  Q  +G  +  + F +A  ++ SK   D+++GI+ L++L     +   KR+Y++YLA+
Sbjct: 10  YMRQCARGDPSAASTFAFAHAMIGSKNKLDVKEGIVCLEKLLRDDEDRTSKRNYVYYLAV 69

Query: 379 GNARIKEYNKALHYVKAFLEIEPANQQVLALERQINKRMEKEGLIG 516
            +ARIK+Y+ AL Y+   L+ E  NQQ   L+  I   M  +GLIG
Sbjct: 70  AHARIKQYDLALGYIDVLLDAEGDNQQAKTLKESIKSAMTHDGLIG 115


>U39999-11|AAA81109.1|  143|Caenorhabditis elegans S. cerevisiae
           fis1-related protein1 protein.
          Length = 143

 Score = 72.9 bits (171), Expect = 5e-13
 Identities = 35/98 (35%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
 Frame = +1

Query: 232 VTHKAQFEYAWCLVRSKYPTDIRKGILLLKELFN--SHAEGKRDYLFYLAIGNARIKEYN 405
           V+ + Q   A  LV S+   +I++GI +L+++ +  +H+E  R  + YLA+ +AR+K Y+
Sbjct: 24  VSRENQISLAIVLVGSEDRREIKEGIEILEDVVSDTAHSEDSRVCVHYLALAHARLKNYD 83

Query: 406 KALHYVKAFLEIEPANQQVLALERQINKRMEKEGLIGM 519
           K+++ + A L  EP+N Q   L R + K+M++EGL+G+
Sbjct: 84  KSINLLNALLRTEPSNMQATELRRAVEKKMKREGLLGL 121


>Z68134-1|CAA92226.2|  492|Caenorhabditis elegans Hypothetical
           protein T27A8.1 protein.
          Length = 492

 Score = 35.1 bits (77), Expect = 0.12
 Identities = 20/80 (25%), Positives = 33/80 (41%)
 Frame = +1

Query: 175 SEDLQKFERIFHEQLHQGKVTHKAQFEYAWCLVRSKYPTDIRKGILLLKELFNSHAEGKR 354
           ++ +    R F    H        Q    W LV S+YP + RK I   K + N H     
Sbjct: 65  TDHIHNLHRKFPNLTHIYSAGQSVQGRELWVLVVSRYPIEHRKLIPEFKYVANMHGNEVT 124

Query: 355 DYLFYLAIGNARIKEYNKAL 414
             +F +++ +  ++ YN  L
Sbjct: 125 GRVFLVSLAHTLLENYNSNL 144


>Z96100-6|CAB76719.1|  222|Caenorhabditis elegans Hypothetical
           protein VH15N14R.1 protein.
          Length = 222

 Score = 25.8 bits (54), Expect(2) = 0.70
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 501 RRFDRDGSGW 530
           RR DRDGSGW
Sbjct: 157 RRMDRDGSGW 166



 Score = 25.4 bits (53), Expect(2) = 0.70
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 510 DRDGSGWWNRTGSRG 554
           DRDGSGW    GS G
Sbjct: 180 DRDGSGWIGMDGSGG 194


>AL033124-1|CAB76736.1|  222|Caenorhabditis elegans Hypothetical
           protein VH15N14R.1 protein.
          Length = 222

 Score = 25.8 bits (54), Expect(2) = 0.70
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 501 RRFDRDGSGW 530
           RR DRDGSGW
Sbjct: 157 RRMDRDGSGW 166



 Score = 25.4 bits (53), Expect(2) = 0.70
 Identities = 10/15 (66%), Positives = 10/15 (66%)
 Frame = +3

Query: 510 DRDGSGWWNRTGSRG 554
           DRDGSGW    GS G
Sbjct: 180 DRDGSGWIGMDGSGG 194


>AL110480-2|CAB60326.1|  244|Caenorhabditis elegans Hypothetical
           protein Y24F12A.3 protein.
          Length = 244

 Score = 25.8 bits (54), Expect(2) = 3.3
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = +3

Query: 501 RRFDRDGSGW 530
           RR DRDGSGW
Sbjct: 162 RRMDRDGSGW 171



 Score = 23.0 bits (47), Expect(2) = 3.3
 Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 2/17 (11%)
 Frame = +3

Query: 510 DRDGSGW--WNRTGSRG 554
           DRDGSGW   +R GS G
Sbjct: 185 DRDGSGWIEVDRDGSGG 201


>U41025-3|AAA82348.1|  244|Caenorhabditis elegans Hypothetical
           protein C01C4.2 protein.
          Length = 244

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 15/31 (48%), Positives = 20/31 (64%)
 Frame = +1

Query: 151 DVLDETVSSEDLQKFERIFHEQLHQGKVTHK 243
           +VL  T  SE LQK E+IF++Q+    V HK
Sbjct: 147 NVLSYTPRSEALQKAEKIFNDQMPSLPVEHK 177


>AL132860-5|CAB60515.1|  798|Caenorhabditis elegans Hypothetical
           protein Y56A3A.6 protein.
          Length = 798

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 584 EANAIPSPIMPPRASTVPPATAIPIKPSFSIR 489
           E   +P P+MPPR  +V   + I   P  ++R
Sbjct: 40  ETAVVPEPVMPPRKGSVAQTSVIHYSPPGTVR 71


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,600,405
Number of Sequences: 27780
Number of extensions: 434087
Number of successful extensions: 984
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 982
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 4006571030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)